| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is 153949217
Identifier: 153949217
GI number: 153949217
Start: 278395
End: 278856
Strand: Direct
Name: 153949217
Synonym: YpsIP31758_0249
Alternate gene names: NA
Gene position: 278395-278856 (Clockwise)
Preceding gene: 153950757
Following gene: 153950306
Centisome position: 5.89
GC content: 36.58
Gene sequence:
>462_bases ATGATTGGTGGTACAAGTAACACAATGGACTTACATGGATTATCTGCAGTTCGTTCCTTCGCTTTTTTGACAGCAGACTT AATGCTAAATATTACTAATAATAACGGAGATAATCACGAATATAAAGTGACCAGTTCCCATGTGAATAACGATAAATTAC AAGGCCCAAAAGGAATTTTAAAAGCCACAAAAAATCACGCAGAACTCAATAATGAAACTATTGCTTCTGGCGAAAAAAAG ACGATTAAATTTGACCAGCTGCACGTTCGAGAAATACCTAATAGAGAGCAAGCTAGCTATATCGACAATCTCAGCCTTAA CCGTAATATTTACTTAGATACCCGTGCTGATCGCGAATGTCGTATTCCTACCCAGGTTATTAGCCCTGACCAAAAAGTAG ATTCTGGTACCAAAGAGCCATTTTGGTTCAGTAAATACCTTTGTATTACTACGTTATATTAA
Upstream 100 bases:
>100_bases TTCCAAAAAATAGCTCATCGATTCAATATAAAGCCTGATGCCACTCTCGTCTGCATAGGCTTAGTATCTATCCTTCACTG CACTTTAAAAAGGATAGGTT
Downstream 100 bases:
>100_bases CTCTATTTATACCCATTATATTTCGAGTTGCCTATGCATTGATTGCTCTGTTGCAACTCGAATTATTGAGTGTTCAGCTT ATTGAGAGTCCAACAATTAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 153; Mature: 153
Protein sequence:
>153_residues MIGGTSNTMDLHGLSAVRSFAFLTADLMLNITNNNGDNHEYKVTSSHVNNDKLQGPKGILKATKNHAELNNETIASGEKK TIKFDQLHVREIPNREQASYIDNLSLNRNIYLDTRADRECRIPTQVISPDQKVDSGTKEPFWFSKYLCITTLY
Sequences:
>Translated_153_residues MIGGTSNTMDLHGLSAVRSFAFLTADLMLNITNNNGDNHEYKVTSSHVNNDKLQGPKGILKATKNHAELNNETIASGEKK TIKFDQLHVREIPNREQASYIDNLSLNRNIYLDTRADRECRIPTQVISPDQKVDSGTKEPFWFSKYLCITTLY >Mature_153_residues MIGGTSNTMDLHGLSAVRSFAFLTADLMLNITNNNGDNHEYKVTSSHVNNDKLQGPKGILKATKNHAELNNETIASGEKK TIKFDQLHVREIPNREQASYIDNLSLNRNIYLDTRADRECRIPTQVISPDQKVDSGTKEPFWFSKYLCITTLY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17288; Mature: 17288
Theoretical pI: Translated: 7.63; Mature: 7.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIGGTSNTMDLHGLSAVRSFAFLTADLMLNITNNNGDNHEYKVTSSHVNNDKLQGPKGIL CCCCCCCCEEHHHHHHHHHHHHEEEEEEEEEECCCCCCCEEEEECCCCCCCCCCCCHHHH KATKNHAELNNETIASGEKKTIKFDQLHVREIPNREQASYIDNLSLNRNIYLDTRADREC HHCCCHHHCCCCEECCCCCCEEEECEEHEECCCCCHHHHHHHCCCCCCEEEEECCCCCCC RIPTQVISPDQKVDSGTKEPFWFSKYLCITTLY CCCHHHCCCCCCCCCCCCCCCEEEEEEEEEECC >Mature Secondary Structure MIGGTSNTMDLHGLSAVRSFAFLTADLMLNITNNNGDNHEYKVTSSHVNNDKLQGPKGIL CCCCCCCCEEHHHHHHHHHHHHEEEEEEEEEECCCCCCCEEEEECCCCCCCCCCCCHHHH KATKNHAELNNETIASGEKKTIKFDQLHVREIPNREQASYIDNLSLNRNIYLDTRADREC HHCCCHHHCCCCEECCCCCCEEEECEEHEECCCCCHHHHHHHCCCCCCEEEEECCCCCCC RIPTQVISPDQKVDSGTKEPFWFSKYLCITTLY CCCHHHCCCCCCCCCCCCCCCEEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA