| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
Click here to switch to the map view.
The map label for this gene is 153949206
Identifier: 153949206
GI number: 153949206
Start: 707636
End: 708034
Strand: Reverse
Name: 153949206
Synonym: YpsIP31758_0603
Alternate gene names: NA
Gene position: 708034-707636 (Counterclockwise)
Preceding gene: 153949026
Following gene: 153948715
Centisome position: 14.99
GC content: 36.84
Gene sequence:
>399_bases ATGGTATTAATCGTCTCTCAGCTATTATTTGTTTGTTACAGTGACATCCGCCACAGAATAATAAGCAATAAGTTTGTTAT TAGCATTGCATTCAACGCCATTATATTGATCCTGGTAACACATCATACTGTTAGTATCATTATTCCTATTGTCGCACTAT TTTTCGGCTATATTATTTTTCATTTCAACGTGATGGGAGGCGGCGATGTAAAATTGATCACAGTACTCCTTCTGGCACTG ACGGCAGAACAGTCATTAAATTTTATAATCTACACAGCGATCATGGGCGGAGTTGTTATGTTAGTAGGTTTATTAATCAA TCGCGCTGATATCCAAAAACGCGGGATTCCCTACGCCATTGCTATCACTGCTGGATTTCTATTATCTGTATTAATTTAA
Upstream 100 bases:
>100_bases TATTGCTCCATAATATCAGCAATAAATATGGCAGCCGTTGGCTGCCATATCCTTTACCTTAATATTAGGTCTGACGATGG ATATAATTAGATTCTCGTTA
Downstream 100 bases:
>100_bases ATGGCTGAAATAAATTGATTTATCACGATAGCATGACAAAAGGTACGAATAATGAATCGAAAATTTCTTATATTATTTTC ACTCCTGATTGTTGCCATCG
Product: type IV prepilin peptidase family protein
Products: NA
Alternate protein names: Prepilin Peptidase TadV; Tight Adherance Operon Protein; Type IV Prepilin Peptidase Family Protein
Number of amino acids: Translated: 132; Mature: 132
Protein sequence:
>132_residues MVLIVSQLLFVCYSDIRHRIISNKFVISIAFNAIILILVTHHTVSIIIPIVALFFGYIIFHFNVMGGGDVKLITVLLLAL TAEQSLNFIIYTAIMGGVVMLVGLLINRADIQKRGIPYAIAITAGFLLSVLI
Sequences:
>Translated_132_residues MVLIVSQLLFVCYSDIRHRIISNKFVISIAFNAIILILVTHHTVSIIIPIVALFFGYIIFHFNVMGGGDVKLITVLLLAL TAEQSLNFIIYTAIMGGVVMLVGLLINRADIQKRGIPYAIAITAGFLLSVLI >Mature_132_residues MVLIVSQLLFVCYSDIRHRIISNKFVISIAFNAIILILVTHHTVSIIIPIVALFFGYIIFHFNVMGGGDVKLITVLLLAL TAEQSLNFIIYTAIMGGVVMLVGLLINRADIQKRGIPYAIAITAGFLLSVLI
Specific function: Unknown
COG id: COG4960
COG function: function code OU; Flp pilus assembly protein, protease CpaA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14499; Mature: 14499
Theoretical pI: Translated: 9.61; Mature: 9.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVLIVSQLLFVCYSDIRHRIISNKFVISIAFNAIILILVTHHTVSIIIPIVALFFGYIIF CCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HFNVMGGGDVKLITVLLLALTAEQSLNFIIYTAIMGGVVMLVGLLINRADIQKRGIPYAI HHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH AITAGFLLSVLI HHHHHHHHHHHC >Mature Secondary Structure MVLIVSQLLFVCYSDIRHRIISNKFVISIAFNAIILILVTHHTVSIIIPIVALFFGYIIF CCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HFNVMGGGDVKLITVLLLALTAEQSLNFIIYTAIMGGVVMLVGLLINRADIQKRGIPYAI HHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH AITAGFLLSVLI HHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA