| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is 153949178
Identifier: 153949178
GI number: 153949178
Start: 899316
End: 901538
Strand: Direct
Name: 153949178
Synonym: YpsIP31758_0734
Alternate gene names: NA
Gene position: 899316-901538 (Clockwise)
Preceding gene: 153947279
Following gene: 153946897
Centisome position: 19.04
GC content: 43.45
Gene sequence:
>2223_bases ATGATTATCAGTCCTCCATTTCTGAGAGATAGAGATGCAACCCAGTCAGATGCTGACTGGGTTGACGCGATGATGCCTGT CAGTTCCCGCAGAGGATATCCTCTTAATACGTCGGATTCATGGCATGGCGGGATACATATACCGCATACGGACTCAGGCG CATTGCCTGAGAAGGTCAGGGCAATAGCTGACGGTACGGTTGTGTCGTTTCGAAAGCCTTCAAAACCCTGGGAAAGAGAT CAATTCCCGCTGAAGTATTCGCCTCCCAGAGGAACGGATGATGGTTATGTTTTATTGAAACATGAGACTGAAATCGGTTC CGGTGACGACGGGAAGGTTGTTTTTTACTCTTTGTATATGCACCTCAAACATCTTGAAGCAGAGATTAAAACTGACGCTA AAATCTATCGTAAAGCCCCGCTGGGTTCTTCGGGAATGACTGATGGGCAGAATGAATTTCATTTCCAGATTTTCTGTGAT GAGGCAAATACCAGGAAATTGGTCGGTAGAACTACTGGCGAGTTAAATATTAATGAAAGTGGCCGGAAAGATGTTGTCTA TGGCGATATTCATTTTTATCTGCCTGCAGGAACGAAATTTTATGAGGCGCGGCCTTCGGCTAATATAGCTACCACAACGA ACTTGAATGAAGTGCATACCAGTGCGGTTCCGTTGTACGCAAGCATGAGTCTCAGTAAAGGGGCAGGCACGATGATTACG CGACAGGCATGTGCGAATGCAGAAGGTACCTTTGAGCCTGTTGGCTCACCTCTGGTCAATGCCGACGGCAAGGACTATGA GTACAACCTTTATAAAACAGCCACCTCACGCTATCCGCAAAGTCCGAGTGCCGGGTATGAACTGCTGCGCTTTGGGCGCA TTATCAACACTGAACATGAAACCCTGGTTCCTGCTGATGCCCCCTTATGGATGACCGTAAATTATCCCGGTGGACAAGGT GTTGTGAACCTAGCCGTAGCAACTGTTAAAAAGTTCAGCGATGCAGATTTTCCCCACTGGACGGGATGGCAGCTGATTGA TGATGATAAAGACATGCATAGCCAGTGCAACTCAGCGGCAATAAGAAAGCTCAGGGAAAAAGACAGGTATGCAGCACAAA GCAGCAAACTTATCTGCTGTATTCCGTTTGAGTGGGAAAAAAGTACTATTGATACCCGATATAAATGGCTGATGACTGGT CTGCCTTGGGAGCAGTGCACGCCGGAAAAAACCGCAACATGGCAAATACCGGGATCTCAGGAATCGAAGGATCGAATTCT GATGAACGAAGAAGACTACGGTAGGTTTAAACAGCATGCAGAAGCCCTATGCTTTGATTCAGGGGCCTTGGGGTCAGGGA AAGTATGGCATTTTGATCCGCGTGGGTTTATTGAGAATTTTAGGAAAAGTAGATGGTTAGATGAGATAGATTTAAGTAGG GTTTACTCCACTACAGCTAAAGATGTTAGGGAAAAATATCGTACTTCTATAAATTTTATATTAATTAAATATGGCATGAA TAATCCAATACGCACAGCTCATTTCTTGGGGCAGGGTGCAATTGAATCACAAAACTTAAATCTTATGGTTGAGGGCTCTG TTTCATTTAGCCGTCATCCTGATCATCCATCATTTGCCGAAGAAATTAATGGCTATTATGCTGACCCGACAGATATTTAT GGTTATTTCCACAATTATGAGCGTGAAGGTAATGATTTGGGGAATATCACTAAAAGCGATTTAAGAGATTCAAGAAATAA TCTTTTGACTGTAGTTATCGGAAGGGACTCAAATAATAGGCCGATTTTAACTGCGCCTCAAAGGAGAACTATTGATTCAA ATTTATCTCATATTGGAGATGGGATGAAATTTCGAGGGCGAGGATTTAAACAGTTAACCGGCCTAGCGAATTACACGGGA TATTGGACTTATAGAGGATGGTTGCGTAGTACGGATTATGATAATAGTTGGTGGCGAAATCCCAATCGGTTAAGGGTTCC TTTAATCGATAACCCTCAAAATATATCGACAGAACCGTATAATTGTATTGACTCTGGAGGGCAATTCGTAGCAAAAAATG GAGTTTTACGAAGAGCAGATGCAGGGGTTACACGCGATAGTTCAAGATCTGTTAGCATGGTAATAAACAGATGGGATCAG CAATCTTTTGAGCGCAGATTTCAATCAACGCAAAATACATATTCTATTGTTGGTGATGAGTAA
Upstream 100 bases:
>100_bases GACAGGAAAAGGCAAATAAACCAGAAGATTTTCCGAGTGTTGCCCCGGAAACAACAGAACCCACCAGTCATTTCACTTTT TCCTGACAAGGAGTCACAAC
Downstream 100 bases:
>100_bases ATGAAAACTATTATGATGTTTTTTTTGATTTTGTTTGCGAATTCATGTTATAGCGGGGAAGAGCATAAATCAACCCCTCT GGGAGAGGCTGCTATAAATA
Product: M23 peptidase domain-containing protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 740; Mature: 740
Protein sequence:
>740_residues MIISPPFLRDRDATQSDADWVDAMMPVSSRRGYPLNTSDSWHGGIHIPHTDSGALPEKVRAIADGTVVSFRKPSKPWERD QFPLKYSPPRGTDDGYVLLKHETEIGSGDDGKVVFYSLYMHLKHLEAEIKTDAKIYRKAPLGSSGMTDGQNEFHFQIFCD EANTRKLVGRTTGELNINESGRKDVVYGDIHFYLPAGTKFYEARPSANIATTTNLNEVHTSAVPLYASMSLSKGAGTMIT RQACANAEGTFEPVGSPLVNADGKDYEYNLYKTATSRYPQSPSAGYELLRFGRIINTEHETLVPADAPLWMTVNYPGGQG VVNLAVATVKKFSDADFPHWTGWQLIDDDKDMHSQCNSAAIRKLREKDRYAAQSSKLICCIPFEWEKSTIDTRYKWLMTG LPWEQCTPEKTATWQIPGSQESKDRILMNEEDYGRFKQHAEALCFDSGALGSGKVWHFDPRGFIENFRKSRWLDEIDLSR VYSTTAKDVREKYRTSINFILIKYGMNNPIRTAHFLGQGAIESQNLNLMVEGSVSFSRHPDHPSFAEEINGYYADPTDIY GYFHNYEREGNDLGNITKSDLRDSRNNLLTVVIGRDSNNRPILTAPQRRTIDSNLSHIGDGMKFRGRGFKQLTGLANYTG YWTYRGWLRSTDYDNSWWRNPNRLRVPLIDNPQNISTEPYNCIDSGGQFVAKNGVLRRADAGVTRDSSRSVSMVINRWDQ QSFERRFQSTQNTYSIVGDE
Sequences:
>Translated_740_residues MIISPPFLRDRDATQSDADWVDAMMPVSSRRGYPLNTSDSWHGGIHIPHTDSGALPEKVRAIADGTVVSFRKPSKPWERD QFPLKYSPPRGTDDGYVLLKHETEIGSGDDGKVVFYSLYMHLKHLEAEIKTDAKIYRKAPLGSSGMTDGQNEFHFQIFCD EANTRKLVGRTTGELNINESGRKDVVYGDIHFYLPAGTKFYEARPSANIATTTNLNEVHTSAVPLYASMSLSKGAGTMIT RQACANAEGTFEPVGSPLVNADGKDYEYNLYKTATSRYPQSPSAGYELLRFGRIINTEHETLVPADAPLWMTVNYPGGQG VVNLAVATVKKFSDADFPHWTGWQLIDDDKDMHSQCNSAAIRKLREKDRYAAQSSKLICCIPFEWEKSTIDTRYKWLMTG LPWEQCTPEKTATWQIPGSQESKDRILMNEEDYGRFKQHAEALCFDSGALGSGKVWHFDPRGFIENFRKSRWLDEIDLSR VYSTTAKDVREKYRTSINFILIKYGMNNPIRTAHFLGQGAIESQNLNLMVEGSVSFSRHPDHPSFAEEINGYYADPTDIY GYFHNYEREGNDLGNITKSDLRDSRNNLLTVVIGRDSNNRPILTAPQRRTIDSNLSHIGDGMKFRGRGFKQLTGLANYTG YWTYRGWLRSTDYDNSWWRNPNRLRVPLIDNPQNISTEPYNCIDSGGQFVAKNGVLRRADAGVTRDSSRSVSMVINRWDQ QSFERRFQSTQNTYSIVGDE >Mature_740_residues MIISPPFLRDRDATQSDADWVDAMMPVSSRRGYPLNTSDSWHGGIHIPHTDSGALPEKVRAIADGTVVSFRKPSKPWERD QFPLKYSPPRGTDDGYVLLKHETEIGSGDDGKVVFYSLYMHLKHLEAEIKTDAKIYRKAPLGSSGMTDGQNEFHFQIFCD EANTRKLVGRTTGELNINESGRKDVVYGDIHFYLPAGTKFYEARPSANIATTTNLNEVHTSAVPLYASMSLSKGAGTMIT RQACANAEGTFEPVGSPLVNADGKDYEYNLYKTATSRYPQSPSAGYELLRFGRIINTEHETLVPADAPLWMTVNYPGGQG VVNLAVATVKKFSDADFPHWTGWQLIDDDKDMHSQCNSAAIRKLREKDRYAAQSSKLICCIPFEWEKSTIDTRYKWLMTG LPWEQCTPEKTATWQIPGSQESKDRILMNEEDYGRFKQHAEALCFDSGALGSGKVWHFDPRGFIENFRKSRWLDEIDLSR VYSTTAKDVREKYRTSINFILIKYGMNNPIRTAHFLGQGAIESQNLNLMVEGSVSFSRHPDHPSFAEEINGYYADPTDIY GYFHNYEREGNDLGNITKSDLRDSRNNLLTVVIGRDSNNRPILTAPQRRTIDSNLSHIGDGMKFRGRGFKQLTGLANYTG YWTYRGWLRSTDYDNSWWRNPNRLRVPLIDNPQNISTEPYNCIDSGGQFVAKNGVLRRADAGVTRDSSRSVSMVINRWDQ QSFERRFQSTQNTYSIVGDE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 83818; Mature: 83818
Theoretical pI: Translated: 7.04; Mature: 7.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIISPPFLRDRDATQSDADWVDAMMPVSSRRGYPLNTSDSWHGGIHIPHTDSGALPEKVR CCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCHHHHH AIADGTVVSFRKPSKPWERDQFPLKYSPPRGTDDGYVLLKHETEIGSGDDGKVVFYSLYM HHHCCCEEEECCCCCCCCCCCCCEEECCCCCCCCCEEEEEECCCCCCCCCCCEEEHHHHH HLKHLEAEIKTDAKIYRKAPLGSSGMTDGQNEFHFQIFCDEANTRKLVGRTTGELNINES HHHHHHHHHCCCHHHHEECCCCCCCCCCCCCCEEEEEEECCCCCCEEEECCCCEEEECCC GRKDVVYGDIHFYLPAGTKFYEARPSANIATTTNLNEVHTSAVPLYASMSLSKGAGTMIT CCCCEEEEEEEEEECCCCEEEECCCCCCEEEECCCHHHHCCCCCEEEEEECCCCCCCEEE RQACANAEGTFEPVGSPLVNADGKDYEYNLYKTATSRYPQSPSAGYELLRFGRIINTEHE HHHHCCCCCCCCCCCCCEECCCCCCEEEEEEEEHHHCCCCCCCHHHHHHHHHHHHCCCCC TLVPADAPLWMTVNYPGGQGVVNLAVATVKKFSDADFPHWTGWQLIDDDKDMHSQCNSAA EECCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEECCCHHHHHHHHHHH IRKLREKDRYAAQSSKLICCIPFEWEKSTIDTRYKWLMTGLPWEQCTPEKTATWQIPGSQ HHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHEEEEECCCCHHHCCCCCCEEEECCCCC ESKDRILMNEEDYGRFKQHAEALCFDSGALGSGKVWHFDPRGFIENFRKSRWLDEIDLSR CCCCCEEECCCHHHHHHHHHHHEEECCCCCCCCCEEEECCHHHHHHHHHHCCCCHHHHHH VYSTTAKDVREKYRTSINFILIKYGMNNPIRTAHFLGQGAIESQNLNLMVEGSVSFSRHP HHHHHHHHHHHHHHCCEEEEEEEECCCCCCHHHHHHCCCCCCCCCCEEEEECCCCCCCCC DHPSFAEEINGYYADPTDIYGYFHNYEREGNDLGNITKSDLRDSRNNLLTVVIGRDSNNR CCCCHHHHCCCEECCHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCCEEEEEEECCCCCC PILTAPQRRTIDSNLSHIGDGMKFRGRGFKQLTGLANYTGYWTYRGWLRSTDYDNSWWRN CEEECCCCCCHHHHHHHHCCCCEECCCCHHHHHCCCCCCEEEEEECEEECCCCCCCCCCC PNRLRVPLIDNPQNISTEPYNCIDSGGQFVAKNGVLRRADAGVTRDSSRSVSMVINRWDQ CCEEEEEEECCCCCCCCCCCHHHCCCCCEEECCCCEEECCCCCCCCCCCCHHHHHHHHHH QSFERRFQSTQNTYSIVGDE HHHHHHHHCCCCEEEEECCC >Mature Secondary Structure MIISPPFLRDRDATQSDADWVDAMMPVSSRRGYPLNTSDSWHGGIHIPHTDSGALPEKVR CCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCHHHHH AIADGTVVSFRKPSKPWERDQFPLKYSPPRGTDDGYVLLKHETEIGSGDDGKVVFYSLYM HHHCCCEEEECCCCCCCCCCCCCEEECCCCCCCCCEEEEEECCCCCCCCCCCEEEHHHHH HLKHLEAEIKTDAKIYRKAPLGSSGMTDGQNEFHFQIFCDEANTRKLVGRTTGELNINES HHHHHHHHHCCCHHHHEECCCCCCCCCCCCCCEEEEEEECCCCCCEEEECCCCEEEECCC GRKDVVYGDIHFYLPAGTKFYEARPSANIATTTNLNEVHTSAVPLYASMSLSKGAGTMIT CCCCEEEEEEEEEECCCCEEEECCCCCCEEEECCCHHHHCCCCCEEEEEECCCCCCCEEE RQACANAEGTFEPVGSPLVNADGKDYEYNLYKTATSRYPQSPSAGYELLRFGRIINTEHE HHHHCCCCCCCCCCCCCEECCCCCCEEEEEEEEHHHCCCCCCCHHHHHHHHHHHHCCCCC TLVPADAPLWMTVNYPGGQGVVNLAVATVKKFSDADFPHWTGWQLIDDDKDMHSQCNSAA EECCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEECCCHHHHHHHHHHH IRKLREKDRYAAQSSKLICCIPFEWEKSTIDTRYKWLMTGLPWEQCTPEKTATWQIPGSQ HHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHEEEEECCCCHHHCCCCCCEEEECCCCC ESKDRILMNEEDYGRFKQHAEALCFDSGALGSGKVWHFDPRGFIENFRKSRWLDEIDLSR CCCCCEEECCCHHHHHHHHHHHEEECCCCCCCCCEEEECCHHHHHHHHHHCCCCHHHHHH VYSTTAKDVREKYRTSINFILIKYGMNNPIRTAHFLGQGAIESQNLNLMVEGSVSFSRHP HHHHHHHHHHHHHHCCEEEEEEEECCCCCCHHHHHHCCCCCCCCCCEEEEECCCCCCCCC DHPSFAEEINGYYADPTDIYGYFHNYEREGNDLGNITKSDLRDSRNNLLTVVIGRDSNNR CCCCHHHHCCCEECCHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCCEEEEEEECCCCCC PILTAPQRRTIDSNLSHIGDGMKFRGRGFKQLTGLANYTGYWTYRGWLRSTDYDNSWWRN CEEECCCCCCHHHHHHHHCCCCEECCCCHHHHHCCCCCCEEEEEECEEECCCCCCCCCCC PNRLRVPLIDNPQNISTEPYNCIDSGGQFVAKNGVLRRADAGVTRDSSRSVSMVINRWDQ CCEEEEEEECCCCCCCCCCCHHHCCCCCEEECCCCEEECCCCCCCCCCCCHHHHHHHHHH QSFERRFQSTQNTYSIVGDE HHHHHHHHCCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA