| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is 153949161
Identifier: 153949161
GI number: 153949161
Start: 2224031
End: 2224882
Strand: Reverse
Name: 153949161
Synonym: YpsIP31758_1921
Alternate gene names: NA
Gene position: 2224882-2224031 (Counterclockwise)
Preceding gene: 153948777
Following gene: 153947611
Centisome position: 47.1
GC content: 35.21
Gene sequence:
>852_bases ATGTTTCCTCGCCTCACTGATTTTGTACCACTCAGTATCCTTACACCGATTAAAGATGATGCTAAAGAAATCCCTGTTGA ACCAAATGATATAACTATTGCTGTTAATAATGCCGATAAGGAGGAAAACAATCCACAATATGTGGTACTGGATAATGGAA TTAGACAAGCAATGATAGATAAAACCACAAATCACTATGATAAAGAGTCACTTACTCACTTGGCCAGTACCTATCCACTT GTTGAAATCGGTGTGCGTGATAGGTTACAGGAAATAAACTCACCACTGCAGTTTCCCTATTCTGTGGATATTAATGTAGA AGATAAACCAGAAAATGGGGTAGTGATTCATCAACATATTGTTTATGCATATAGTTCTGGAGGCCATGGTAGTACAAGCA GTCCAGCTCATAATTGTACTCAAGTGAATAAACCACTTATTGACATTTATTGCCAGATTGATGTGCCAGGGGATAATAAT TTATTACACAATCTGGATATCAAGTTGTCTATAAAACTCAATGAAGAAGTTGGCTTCTCTTTAAATAAAATATTTAACCC TTATGACATTCTACGCAATATATGGGGGAATGTCATAAAACTATATGAAGAGAATAAAATTGATAATAACATTACCGATT CAGATATCAATTTTGATGATGACGAGTGGGTAAGTGATGAAGATATTGCCCTGTTGGCGGAGTTTTCTAAGCAAAAAAAT AATATTGAAGAGCCACATAAAAAACTAGAGTTGGTATATCCAGAACATCAAGATTTTGAATGGGATGATAATTTTGGACT GGATGACTATTTCAAATCAGATGCCGAGGAGGATGAGCTCTCCTTACATTAA
Upstream 100 bases:
>100_bases TTTACTGATTAGTCGGTAAAAATTGAAAGTCATTACAATATTTTAGGTCTATTATTTCACTCCGTATTAAATAGAAAACT TAATAATAAATGGAGTTAAT
Downstream 100 bases:
>100_bases CAATATAAGTATAAAAATATTCAAAGGGTGCTAAACATAGCTTCGTTATAATTACCGTAGCTTATCGTCATCTTAGGTGA TACCTATCACTATGAACGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 283; Mature: 283
Protein sequence:
>283_residues MFPRLTDFVPLSILTPIKDDAKEIPVEPNDITIAVNNADKEENNPQYVVLDNGIRQAMIDKTTNHYDKESLTHLASTYPL VEIGVRDRLQEINSPLQFPYSVDINVEDKPENGVVIHQHIVYAYSSGGHGSTSSPAHNCTQVNKPLIDIYCQIDVPGDNN LLHNLDIKLSIKLNEEVGFSLNKIFNPYDILRNIWGNVIKLYEENKIDNNITDSDINFDDDEWVSDEDIALLAEFSKQKN NIEEPHKKLELVYPEHQDFEWDDNFGLDDYFKSDAEEDELSLH
Sequences:
>Translated_283_residues MFPRLTDFVPLSILTPIKDDAKEIPVEPNDITIAVNNADKEENNPQYVVLDNGIRQAMIDKTTNHYDKESLTHLASTYPL VEIGVRDRLQEINSPLQFPYSVDINVEDKPENGVVIHQHIVYAYSSGGHGSTSSPAHNCTQVNKPLIDIYCQIDVPGDNN LLHNLDIKLSIKLNEEVGFSLNKIFNPYDILRNIWGNVIKLYEENKIDNNITDSDINFDDDEWVSDEDIALLAEFSKQKN NIEEPHKKLELVYPEHQDFEWDDNFGLDDYFKSDAEEDELSLH >Mature_283_residues MFPRLTDFVPLSILTPIKDDAKEIPVEPNDITIAVNNADKEENNPQYVVLDNGIRQAMIDKTTNHYDKESLTHLASTYPL VEIGVRDRLQEINSPLQFPYSVDINVEDKPENGVVIHQHIVYAYSSGGHGSTSSPAHNCTQVNKPLIDIYCQIDVPGDNN LLHNLDIKLSIKLNEEVGFSLNKIFNPYDILRNIWGNVIKLYEENKIDNNITDSDINFDDDEWVSDEDIALLAEFSKQKN NIEEPHKKLELVYPEHQDFEWDDNFGLDDYFKSDAEEDELSLH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32426; Mature: 32426
Theoretical pI: Translated: 4.14; Mature: 4.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFPRLTDFVPLSILTPIKDDAKEIPVEPNDITIAVNNADKEENNPQYVVLDNGIRQAMID CCCCCCCCCCCEEECCCCCCHHHCCCCCCCEEEEECCCCCCCCCCCEEEEECCHHHHHHH KTTNHYDKESLTHLASTYPLVEIGVRDRLQEINSPLQFPYSVDINVEDKPENGVVIHQHI HHCCCCCHHHHHHHHHCCCEEEECHHHHHHHHCCCCCCCEEEEEEECCCCCCCEEEEEEE VYAYSSGGHGSTSSPAHNCTQVNKPLIDIYCQIDVPGDNNLLHNLDIKLSIKLNEEVGFS EEEECCCCCCCCCCCCCCHHHCCCCEEEEEEEEECCCCCCEEEEEEEEEEEEECCCCCCH LNKIFNPYDILRNIWGNVIKLYEENKIDNNITDSDINFDDDEWVSDEDIALLAEFSKQKN HHHCCCHHHHHHHHHHHHEEHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCC NIEEPHKKLELVYPEHQDFEWDDNFGLDDYFKSDAEEDELSLH CCCCHHHHEEEECCCCCCCCCCCCCCCHHHHHCCCCCCCCCCC >Mature Secondary Structure MFPRLTDFVPLSILTPIKDDAKEIPVEPNDITIAVNNADKEENNPQYVVLDNGIRQAMID CCCCCCCCCCCEEECCCCCCHHHCCCCCCCEEEEECCCCCCCCCCCEEEEECCHHHHHHH KTTNHYDKESLTHLASTYPLVEIGVRDRLQEINSPLQFPYSVDINVEDKPENGVVIHQHI HHCCCCCHHHHHHHHHCCCEEEECHHHHHHHHCCCCCCCEEEEEEECCCCCCCEEEEEEE VYAYSSGGHGSTSSPAHNCTQVNKPLIDIYCQIDVPGDNNLLHNLDIKLSIKLNEEVGFS EEEECCCCCCCCCCCCCCHHHCCCCEEEEEEEEECCCCCCEEEEEEEEEEEEECCCCCCH LNKIFNPYDILRNIWGNVIKLYEENKIDNNITDSDINFDDDEWVSDEDIALLAEFSKQKN HHHCCCHHHHHHHHHHHHEEHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCC NIEEPHKKLELVYPEHQDFEWDDNFGLDDYFKSDAEEDELSLH CCCCHHHHEEEECCCCCCCCCCCCCCCHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA