Click here to switch to the map view.

The map label for this gene is ssuA [C]

Identifier: 153949127

GI number: 153949127

Start: 2142540

End: 2143571

Strand: Reverse

Name: ssuA [C]

Synonym: YpsIP31758_1849

Alternate gene names: 153949127

Gene position: 2143571-2142540 (Counterclockwise)

Preceding gene: 153946965

Following gene: 153949819

Centisome position: 45.38

GC content: 42.64

Gene sequence:

>1032_bases
ATGATTAAGTTTATATCAACATCAATAATATCACTTGAATTTTATAAAACTTCATTAAAAAAATCATTCATAGCAATATC
TGCCTTACCATTACTCATGTCCAGCATGGCATGGGCACAGCCAGATGTGGTAAGGCTTGGCAATTTAAAATTCGCTCATT
ATGGCGCTATTTCATATATGAAAGAGATAGCACCAAAATATAACATAAAGATAGAAGAACGAATGTTTGCAAAGGGGATA
GATATTGCTCCCGCAATCGTCGCGGGGCAAATTGATATAGCGGCCAGTGCAGTTGATGCGGCAATCGCTGCCCGCGCTCA
AAATATCCCCATTTATGTTATTGCCGGATTTGCCAAAGGCGGTGCCCGAATTGTTATTGGCAATAATAGCAGTATTAAAT
CCGTTGCTGATTTTAAAGGTAAAAAAGTGGGGGTTGCCCGTGGTGGTGCTCAGGAACTTCTTCTTCTGGCAGAGTTGGAT
AAATATGGACTGACATGGTCTGATCGGCCAGGAAAAGATGTTCAGATTATTTATATGGCTTATGCCGATCTTAATCAGGC
TCTTCAGTCTGGTAATCTGGATGCTATTAGCCAATCTGAACCGCATGCCAGCCAGGCAATTAATATAGGGTATGGTGTCG
AGTTGTTGAAGCCCTACGATACCCCCGTAGGCGTTCCAATTCGCGCGTTGATCATGACGGAAGCCATGTATAAAGAGAAG
CCAGAGGTGGCTGCTCGCGTACTTAAACTGTTTGTTGACGCGACCAATACCTTTATTCAACAACCTGAAATAGCGGAAGA
ATATGTCCGTAAAGAGATGTTTAAGAACCAAATTACCTCGCAAGATTATCAAGATGCTATTGGTAATTCCCCATTCAGTT
ACGACATCACGGTGGAACATGTTCAGGTGACGACTGACTTAATGCGGAAATATGGCATCGGCCGAATGAATAATCCCCCC
GTTGCCGCTGATTGGGTAAAGACTGATCTTCTTGAGGCTGCAAAGAAAAGCATTGGGGTTAATGGGTCATAA

Upstream 100 bases:

>100_bases
GGGTATATGTCTCTGCAATAAGTCATTATTAATAAATTAAACTTAAGAATAGTAAATGACATGAAGCGATTACAATCGTT
TCACATATAAGGGAAAATAT

Downstream 100 bases:

>100_bases
CTGATGAAAAATATTAAGGTTTATCAATATATCAAGTGGGTCATTATGCCAACTATTGTGCTGTTAATGTGGCAAATGCT
CGCAATATCGGGCTGGATAC

Product: ABC transporter periplasmic protein

Products: NA

Alternate protein names: ABC Transporter

Number of amino acids: Translated: 343; Mature: 343

Protein sequence:

>343_residues
MIKFISTSIISLEFYKTSLKKSFIAISALPLLMSSMAWAQPDVVRLGNLKFAHYGAISYMKEIAPKYNIKIEERMFAKGI
DIAPAIVAGQIDIAASAVDAAIAARAQNIPIYVIAGFAKGGARIVIGNNSSIKSVADFKGKKVGVARGGAQELLLLAELD
KYGLTWSDRPGKDVQIIYMAYADLNQALQSGNLDAISQSEPHASQAINIGYGVELLKPYDTPVGVPIRALIMTEAMYKEK
PEVAARVLKLFVDATNTFIQQPEIAEEYVRKEMFKNQITSQDYQDAIGNSPFSYDITVEHVQVTTDLMRKYGIGRMNNPP
VAADWVKTDLLEAAKKSIGVNGS

Sequences:

>Translated_343_residues
MIKFISTSIISLEFYKTSLKKSFIAISALPLLMSSMAWAQPDVVRLGNLKFAHYGAISYMKEIAPKYNIKIEERMFAKGI
DIAPAIVAGQIDIAASAVDAAIAARAQNIPIYVIAGFAKGGARIVIGNNSSIKSVADFKGKKVGVARGGAQELLLLAELD
KYGLTWSDRPGKDVQIIYMAYADLNQALQSGNLDAISQSEPHASQAINIGYGVELLKPYDTPVGVPIRALIMTEAMYKEK
PEVAARVLKLFVDATNTFIQQPEIAEEYVRKEMFKNQITSQDYQDAIGNSPFSYDITVEHVQVTTDLMRKYGIGRMNNPP
VAADWVKTDLLEAAKKSIGVNGS
>Mature_343_residues
MIKFISTSIISLEFYKTSLKKSFIAISALPLLMSSMAWAQPDVVRLGNLKFAHYGAISYMKEIAPKYNIKIEERMFAKGI
DIAPAIVAGQIDIAASAVDAAIAARAQNIPIYVIAGFAKGGARIVIGNNSSIKSVADFKGKKVGVARGGAQELLLLAELD
KYGLTWSDRPGKDVQIIYMAYADLNQALQSGNLDAISQSEPHASQAINIGYGVELLKPYDTPVGVPIRALIMTEAMYKEK
PEVAARVLKLFVDATNTFIQQPEIAEEYVRKEMFKNQITSQDYQDAIGNSPFSYDITVEHVQVTTDLMRKYGIGRMNNPP
VAADWVKTDLLEAAKKSIGVNGS

Specific function: Part Of A Binding-Protein-Dependent Transport System For Aliphatic Sulfonates. Putative Binding Protein. [C]

COG id: COG0715

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081803, Length=150, Percent_Identity=34.6666666666667, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37446; Mature: 37446

Theoretical pI: Translated: 8.94; Mature: 8.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKFISTSIISLEFYKTSLKKSFIAISALPLLMSSMAWAQPDVVRLGNLKFAHYGAISYM
CCEEEEHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCEEEEHHHHHHHH
KEIAPKYNIKIEERMFAKGIDIAPAIVAGQIDIAASAVDAAIAARAQNIPIYVIAGFAKG
HHHCCCCCCEEHHHHHHCCCCCCCHHEECCHHHHHHHHHHHHHHHCCCCCEEEEEEECCC
GARIVIGNNSSIKSVADFKGKKVGVARGGAQELLLLAELDKYGLTWSDRPGKDVQIIYMA
CCEEEEECCCCCHHHHHCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEE
YADLNQALQSGNLDAISQSEPHASQAINIGYGVELLKPYDTPVGVPIRALIMTEAMYKEK
HHHHHHHHHCCCCCCCCCCCCCHHHEEECCCCEEEECCCCCCCCCCHHHHHHHHHHHHCC
PEVAARVLKLFVDATNTFIQQPEIAEEYVRKEMFKNQITSQDYQDAIGNSPFSYDITVEH
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHCCCCEEEEEEEEE
VQVTTDLMRKYGIGRMNNPPVAADWVKTDLLEAAKKSIGVNGS
EHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MIKFISTSIISLEFYKTSLKKSFIAISALPLLMSSMAWAQPDVVRLGNLKFAHYGAISYM
CCEEEEHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCEEEEHHHHHHHH
KEIAPKYNIKIEERMFAKGIDIAPAIVAGQIDIAASAVDAAIAARAQNIPIYVIAGFAKG
HHHCCCCCCEEHHHHHHCCCCCCCHHEECCHHHHHHHHHHHHHHHCCCCCEEEEEEECCC
GARIVIGNNSSIKSVADFKGKKVGVARGGAQELLLLAELDKYGLTWSDRPGKDVQIIYMA
CCEEEEECCCCCHHHHHCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEE
YADLNQALQSGNLDAISQSEPHASQAINIGYGVELLKPYDTPVGVPIRALIMTEAMYKEK
HHHHHHHHHCCCCCCCCCCCCCHHHEEECCCCEEEECCCCCCCCCCHHHHHHHHHHHHCC
PEVAARVLKLFVDATNTFIQQPEIAEEYVRKEMFKNQITSQDYQDAIGNSPFSYDITVEH
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHCCCCEEEEEEEEE
VQVTTDLMRKYGIGRMNNPPVAADWVKTDLLEAAKKSIGVNGS
EHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA