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The map label for this gene is yhcH [C]

Identifier: 153949114

GI number: 153949114

Start: 1515533

End: 1516003

Strand: Direct

Name: yhcH [C]

Synonym: YpsIP31758_1296

Alternate gene names: 153949114

Gene position: 1515533-1516003 (Clockwise)

Preceding gene: 153949674

Following gene: 153948582

Centisome position: 32.09

GC content: 47.56

Gene sequence:

>471_bases
ATGATCAGTGGATCCTTGGCACAACCGGCGTTTTTTAGTGGCTTACCTGAACGTCTTCAATGGGTATTAGCTTATCTGGC
GGATATGCCTTTAGCGCAGTTAAGCTGCGGGCGGCATGAGATAGACGGTGAGTTGATGTTTATGAATGTCATGGCGTTTG
ACACTCAACCCGCAGAGAGTAAGAAAGCAGAGCTACATCGTACCTACGCCGATGTGCAATTACTGATCAGCGGCATTGAG
GGGATTGAGTATTCGACCCTGACACCGACAGAACATCTGGAGCCTTATCACCCTGATGATGATTATCAGCTCATCGCCGA
TATTCCAGATAAAAGCCAGTTACGTATGTTGCCCGGCATGTTTGCGGTATTTTTACCGGGAGAGCCACATAAGCCAGGCT
GCCAGATAACCGGTTCTGGTGCTATCAAAAAGGTGGTCGTGAAGGTTCATTATAGTCTTTTGAATAGCTAG

Upstream 100 bases:

>100_bases
GGCCAGAACGTCGTTGTGATCACGATCAGTGATATACCGTTATTGAGTCACTTACCGTTATCAGTAAATATACCGTCATC
AGTCAATATCGAGGCATAAC

Downstream 100 bases:

>100_bases
TTATCTTTCTGATTTTATATCATAAGAAAAACAGCGTTTTTGACCTTTTTACCCGGTTTTCCGGGTTTTTTTATTGATCT
TATCCCGTACACCTCCACCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 156; Mature: 156

Protein sequence:

>156_residues
MISGSLAQPAFFSGLPERLQWVLAYLADMPLAQLSCGRHEIDGELMFMNVMAFDTQPAESKKAELHRTYADVQLLISGIE
GIEYSTLTPTEHLEPYHPDDDYQLIADIPDKSQLRMLPGMFAVFLPGEPHKPGCQITGSGAIKKVVVKVHYSLLNS

Sequences:

>Translated_156_residues
MISGSLAQPAFFSGLPERLQWVLAYLADMPLAQLSCGRHEIDGELMFMNVMAFDTQPAESKKAELHRTYADVQLLISGIE
GIEYSTLTPTEHLEPYHPDDDYQLIADIPDKSQLRMLPGMFAVFLPGEPHKPGCQITGSGAIKKVVVKVHYSLLNS
>Mature_156_residues
MISGSLAQPAFFSGLPERLQWVLAYLADMPLAQLSCGRHEIDGELMFMNVMAFDTQPAESKKAELHRTYADVQLLISGIE
GIEYSTLTPTEHLEPYHPDDDYQLIADIPDKSQLRMLPGMFAVFLPGEPHKPGCQITGSGAIKKVVVKVHYSLLNS

Specific function: Unknown

COG id: COG2731

COG function: function code G; Beta-galactosidase, beta subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yhcH [H]

Homologues:

Organism=Escherichia coli, GI1789615, Length=106, Percent_Identity=49.0566037735849, Blast_Score=112, Evalue=1e-26,
Organism=Escherichia coli, GI1790001, Length=156, Percent_Identity=32.0512820512821, Blast_Score=80, Evalue=5e-17,
Organism=Escherichia coli, GI87082398, Length=135, Percent_Identity=30.3703703703704, Blast_Score=79, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004375 [H]

Pfam domain/function: PF04074 DUF386 [H]

EC number: NA

Molecular weight: Translated: 17288; Mature: 17288

Theoretical pI: Translated: 4.92; Mature: 4.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISGSLAQPAFFSGLPERLQWVLAYLADMPLAQLSCGRHEIDGELMFMNVMAFDTQPAES
CCCCCCCCCHHHCCCHHHHHHHHHHHHCCCHHHHCCCCCCCCCEEEEEEEEEECCCCCCH
KKAELHRTYADVQLLISGIEGIEYSTLTPTEHLEPYHPDDDYQLIADIPDKSQLRMLPGM
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCCCEEEECCCCHHHHHHCCCE
FAVFLPGEPHKPGCQITGSGAIKKVVVKVHYSLLNS
EEEEECCCCCCCCCEEECCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MISGSLAQPAFFSGLPERLQWVLAYLADMPLAQLSCGRHEIDGELMFMNVMAFDTQPAES
CCCCCCCCCHHHCCCHHHHHHHHHHHHCCCHHHHCCCCCCCCCEEEEEEEEEECCCCCCH
KKAELHRTYADVQLLISGIEGIEYSTLTPTEHLEPYHPDDDYQLIADIPDKSQLRMLPGM
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCCCEEEECCCCHHHHHHCCCE
FAVFLPGEPHKPGCQITGSGAIKKVVVKVHYSLLNS
EEEEECCCCCCCCCEEECCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 9719565; 10675023 [H]