Click here to switch to the map view.

The map label for this gene is 153949042

Identifier: 153949042

GI number: 153949042

Start: 1613591

End: 1616341

Strand: Direct

Name: 153949042

Synonym: YpsIP31758_1374

Alternate gene names: NA

Gene position: 1613591-1616341 (Clockwise)

Preceding gene: 153948377

Following gene: 153946845

Centisome position: 34.16

GC content: 53.07

Gene sequence:

>2751_bases
ATGCCTTATCTATTGGGTGAGCCTGCGCTGGTACTGTCTAAGTTGGAAGGCGAGGAAGCTTTTTCGACTTTATATTCTTA
TACTATTACGGCAAAGACACCGGCTAATCCATTAATTCCTTGGCAAGCGGCTTCAAATGTCGATCTCAAATCCTTAATTG
GTAAAGAGATGACGATTGAAATGGAACTGGACGGCAACGGCCTGGGTGATGTGAGAAGTGTAGGTAAAGGCACGCGTGAA
ATTACGGGGCTGGTTGAGAGAGCCAGATACATTGGTCGAGATGCCAATCAGGCCATATTTGAGATCACTATTAAGCCTTG
GTTCTACCTGGCTAATTTAACCTCTGACTTTAAAATTTATCAAAATAAAAATGTCGTTGATATTATAGAGGAAGTGTTCT
CAGACTATAATTTTCCGTTTGAGAAACGGTTGGCTACAACCTATCCGATATTAGATTTTCAGGTTCAGTACGGTGAAACC
GACTTTAATTTCCTTCAGCGTTTGATGGAAGAGTGGGGTATTTACTGGTTCTTTGAGCATCAGGATCATAAACAAAAATT
AATTCTTGTGGATCATGTCGGTGCGCATAAACGCTCGTTCAGTACCGCCTACCATGCCATTGAGTACTTGTCAGATGAGC
CTAAAGCGGGCGAAGAGTACATCACACAATTCCAGACTCAGGAAACCTTGACGAGTGGGACCTGGGTCACCAACGATTAT
GACTTCACGAAATCCCGTGCCGATATTCTGGCAATGGACAGTAAACCGCGTAAAACCAGCTTTAACGATCTCGAGATTTA
TCACTGGCCAGGGGATTATGATCAGCCAGATATTGGTGAGCACCTTTCACGCGTGCGTATCGAAGAACGTGGTGCTCTGG
GTTCGCGGGCGGTCGGTTCTGGTCAACTGCGCGGGATAGTTTGTGGTGCTAACTTCGAGCTGAAAGGGTTCCCCGTTGAT
AAAGCGAATCGGGAATACATGATTATCTCCAGCCGTTTGACGGTGGCTGAAGTTGATCAACTGTCTGGCGGTGAGGATGC
GTTTAGTTGCGAGAGTTCTTTCACGGTTCAGCCGACGACCAAAATCTATCGTCACCCACAGGTGACACCAAAACCGAAAA
CCAATGGGCCGCAAAACGCCATTATTGTGGGGCCACCGGGTGAAGAGATTTGGACCGATGAATATGGCCGCGTAAAAGTG
CGTTTCGTTTGGGATCGCTATGGCACAAACAGCGAGTCAGACTCTTGCTGGCTACGTGTTAGCCAGGCTTGGGCAGGTAA
CAGCTTTGGTGGGATCTATATTCCACGCATTGGTCAGGAAGTCATTGTTGACTGTATTAACGGCGATCCTGACCGGCCAA
TGGTGATGGGCAGCCTTTATAATAATGTGACGCGTCCCCCTTGGGACCTGCCTGCCAATGCGACGCAAAGTGGCATGGTC
AGTCGTACTGTTGGCGGCGGGTTAACCAACTATAACGGCGTTCGTTTTGAAGATAAATCGGGGCTGGAGCAGTACTGGGA
ACAGGCCGAGCGCGATATGTCGCGTTTGACTAAAAATAATGAAACGCAAATTATCGGTGCCGATTCGGTCCTGAATGTTG
GGGCCAACCGAAGTGAAGTTGTCGGGGCCAATTATAACCAAGATGTTCTTGGCACATCAATGTTAGCCATCGGTGCTGCC
TCTATGCTACAGGTGGGATTGGCGCGTAGCGTTGTGGTTGGCGGAGCACATTCACTGAATGTGGTTTTGGCGAATGCCAC
CAATGTGGGTGGCGCTAACATGACCAACGTAGGGGGGTTTAATGGCCTTGCGGTGGGGGGAGCCCATCAGACAGCTGTAG
GCGGTGCTGCGACACTGGCTGCCGGCGGCCCTATTGCTATTGGGGCGGGTGGTGAGCTTATCCTCAGTGGGGATATCGTA
AAAATTGTTGGTAAAAGTAAGGTTATTATTCAGGGCGGTGAAGTTCACATTAACTCTGATGATTGTTGTGGTCGTAAAAC
GGGCAATGGCGGCGGGGCATTCGGTGCCTTTGCGAGCCTGGCAGGTTTATTGCCGCTGGCGGGTGCTATTGCCTTACCGC
TACCGTTACCCGTGTTGCCAATAGTGGTGCCACCAGTGACATCGCCACCGGATCCAACAGTGCCACCGGATCCGACATTG
CCACCGGATCCGACATTGCCACCAGATCCAACGTTGCCACCAGATCCAACGTTACCGCCGGAAACCACGGCACCGCCGGA
AACCACGGCACCGCCAGAAACCACGGCACCGCCGGAAACCACGGCACCGCCGGAAACCACGGCACCGCCGGAAACCACGG
CACCGCCGGAAACAACGGCACCGCCGGAAACAACGGCACCGCCGGAAACAACGGCACCGCCAGAGACAACGGCACCGCCA
GAGACAACGGCACCGCCGGAAACAACGGCACCGCCGGAAACAACGGCACCGCCGGAAACAACGGCACCGCCAGAGACAAC
GGCACCGCCGGAAACAACGGCACCGCCAGAGACAACGGCACCGCCGGAAACAACGGCACCGCCAGAGACAACGGCACCGC
CGGAAACAACGGCACCGCCAGAGACAACGGCACCGCCAGAGACAACGGCACCGCCGGAAACAACGGCACCGCCAGAAACA
ACGGCACCGCCGGAAACAACGGCACCGCCGGAAACAACGGCACCGCCAGAAACAACGGCACCGCCGGAACCGACGCGAAC
ACCGCCAGGGACGCAGACGCCACCGCCTTGA

Upstream 100 bases:

>100_bases
AATTATGAACAGACAATTAAAAGTGTCATGCACACTTTTCGATATTAACTAGACATTAGGTATTAGTATGTCAAGGACAA
TAAATTTGAGCAGCCCGGCT

Downstream 100 bases:

>100_bases
TTTTATAGATAAAAGGTAAGCATGTTCTGCGTGGGAAACACACGTAGAGCATGCGGTCTCTGATTTTTCGAACGGTTAGA
ATTTAATTGAGGTGACGTAT

Product: Rhs element Vgr protein

Products: NA

Alternate protein names: Rhs Element Vgr Protein; Rhs-Family Protein; Rhs Family Protein; VgrG Protein; Rhs Element Vgr Family Protein; Rhs Accessory Genetic Element; Vgr Protein; VgrG Family T6SS G; Replication/Virulence Associated Protein; Conserved Hypothethical Protein; Rhs Element Vgr Family; Vgr-Related Protein; Rhs Element Vgr ProteinGp5-Like; Type VI Secretion System VgrG Family Protein; Rhs Element Vgr Protein Subfamily; Rhs Element Protein; Type VI Secretion System Effector Protein VgrS; VrgG Protein; Rhs Protein; Rhs/Vgr-Family Protein; Fimbrial Operon Related Protein; Vgr Family Type VI Secretion System

Number of amino acids: Translated: 916; Mature: 915

Protein sequence:

>916_residues
MPYLLGEPALVLSKLEGEEAFSTLYSYTITAKTPANPLIPWQAASNVDLKSLIGKEMTIEMELDGNGLGDVRSVGKGTRE
ITGLVERARYIGRDANQAIFEITIKPWFYLANLTSDFKIYQNKNVVDIIEEVFSDYNFPFEKRLATTYPILDFQVQYGET
DFNFLQRLMEEWGIYWFFEHQDHKQKLILVDHVGAHKRSFSTAYHAIEYLSDEPKAGEEYITQFQTQETLTSGTWVTNDY
DFTKSRADILAMDSKPRKTSFNDLEIYHWPGDYDQPDIGEHLSRVRIEERGALGSRAVGSGQLRGIVCGANFELKGFPVD
KANREYMIISSRLTVAEVDQLSGGEDAFSCESSFTVQPTTKIYRHPQVTPKPKTNGPQNAIIVGPPGEEIWTDEYGRVKV
RFVWDRYGTNSESDSCWLRVSQAWAGNSFGGIYIPRIGQEVIVDCINGDPDRPMVMGSLYNNVTRPPWDLPANATQSGMV
SRTVGGGLTNYNGVRFEDKSGLEQYWEQAERDMSRLTKNNETQIIGADSVLNVGANRSEVVGANYNQDVLGTSMLAIGAA
SMLQVGLARSVVVGGAHSLNVVLANATNVGGANMTNVGGFNGLAVGGAHQTAVGGAATLAAGGPIAIGAGGELILSGDIV
KIVGKSKVIIQGGEVHINSDDCCGRKTGNGGGAFGAFASLAGLLPLAGAIALPLPLPVLPIVVPPVTSPPDPTVPPDPTL
PPDPTLPPDPTLPPDPTLPPETTAPPETTAPPETTAPPETTAPPETTAPPETTAPPETTAPPETTAPPETTAPPETTAPP
ETTAPPETTAPPETTAPPETTAPPETTAPPETTAPPETTAPPETTAPPETTAPPETTAPPETTAPPETTAPPETTAPPET
TAPPETTAPPETTAPPETTAPPEPTRTPPGTQTPPP

Sequences:

>Translated_916_residues
MPYLLGEPALVLSKLEGEEAFSTLYSYTITAKTPANPLIPWQAASNVDLKSLIGKEMTIEMELDGNGLGDVRSVGKGTRE
ITGLVERARYIGRDANQAIFEITIKPWFYLANLTSDFKIYQNKNVVDIIEEVFSDYNFPFEKRLATTYPILDFQVQYGET
DFNFLQRLMEEWGIYWFFEHQDHKQKLILVDHVGAHKRSFSTAYHAIEYLSDEPKAGEEYITQFQTQETLTSGTWVTNDY
DFTKSRADILAMDSKPRKTSFNDLEIYHWPGDYDQPDIGEHLSRVRIEERGALGSRAVGSGQLRGIVCGANFELKGFPVD
KANREYMIISSRLTVAEVDQLSGGEDAFSCESSFTVQPTTKIYRHPQVTPKPKTNGPQNAIIVGPPGEEIWTDEYGRVKV
RFVWDRYGTNSESDSCWLRVSQAWAGNSFGGIYIPRIGQEVIVDCINGDPDRPMVMGSLYNNVTRPPWDLPANATQSGMV
SRTVGGGLTNYNGVRFEDKSGLEQYWEQAERDMSRLTKNNETQIIGADSVLNVGANRSEVVGANYNQDVLGTSMLAIGAA
SMLQVGLARSVVVGGAHSLNVVLANATNVGGANMTNVGGFNGLAVGGAHQTAVGGAATLAAGGPIAIGAGGELILSGDIV
KIVGKSKVIIQGGEVHINSDDCCGRKTGNGGGAFGAFASLAGLLPLAGAIALPLPLPVLPIVVPPVTSPPDPTVPPDPTL
PPDPTLPPDPTLPPDPTLPPETTAPPETTAPPETTAPPETTAPPETTAPPETTAPPETTAPPETTAPPETTAPPETTAPP
ETTAPPETTAPPETTAPPETTAPPETTAPPETTAPPETTAPPETTAPPETTAPPETTAPPETTAPPETTAPPETTAPPET
TAPPETTAPPETTAPPETTAPPEPTRTPPGTQTPPP
>Mature_915_residues
PYLLGEPALVLSKLEGEEAFSTLYSYTITAKTPANPLIPWQAASNVDLKSLIGKEMTIEMELDGNGLGDVRSVGKGTREI
TGLVERARYIGRDANQAIFEITIKPWFYLANLTSDFKIYQNKNVVDIIEEVFSDYNFPFEKRLATTYPILDFQVQYGETD
FNFLQRLMEEWGIYWFFEHQDHKQKLILVDHVGAHKRSFSTAYHAIEYLSDEPKAGEEYITQFQTQETLTSGTWVTNDYD
FTKSRADILAMDSKPRKTSFNDLEIYHWPGDYDQPDIGEHLSRVRIEERGALGSRAVGSGQLRGIVCGANFELKGFPVDK
ANREYMIISSRLTVAEVDQLSGGEDAFSCESSFTVQPTTKIYRHPQVTPKPKTNGPQNAIIVGPPGEEIWTDEYGRVKVR
FVWDRYGTNSESDSCWLRVSQAWAGNSFGGIYIPRIGQEVIVDCINGDPDRPMVMGSLYNNVTRPPWDLPANATQSGMVS
RTVGGGLTNYNGVRFEDKSGLEQYWEQAERDMSRLTKNNETQIIGADSVLNVGANRSEVVGANYNQDVLGTSMLAIGAAS
MLQVGLARSVVVGGAHSLNVVLANATNVGGANMTNVGGFNGLAVGGAHQTAVGGAATLAAGGPIAIGAGGELILSGDIVK
IVGKSKVIIQGGEVHINSDDCCGRKTGNGGGAFGAFASLAGLLPLAGAIALPLPLPVLPIVVPPVTSPPDPTVPPDPTLP
PDPTLPPDPTLPPDPTLPPETTAPPETTAPPETTAPPETTAPPETTAPPETTAPPETTAPPETTAPPETTAPPETTAPPE
TTAPPETTAPPETTAPPETTAPPETTAPPETTAPPETTAPPETTAPPETTAPPETTAPPETTAPPETTAPPETTAPPETT
APPETTAPPETTAPPETTAPPEPTRTPPGTQTPPP

Specific function: Unknown

COG id: COG3501

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Caenorhabditis elegans, GI17533675, Length=182, Percent_Identity=36.2637362637363, Blast_Score=78, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 97772; Mature: 97641

Theoretical pI: Translated: 4.27; Mature: 4.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPYLLGEPALVLSKLEGEEAFSTLYSYTITAKTPANPLIPWQAASNVDLKSLIGKEMTIE
CCCCCCCHHHHHHHHCCHHHHHHHHEEEEEECCCCCCCCCCCCCCCCCHHHHCCCCEEEE
MELDGNGLGDVRSVGKGTREITGLVERARYIGRDANQAIFEITIKPWFYLANLTSDFKIY
EEECCCCCHHHHHHCCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCEEEEEECCCCEEEE
QNKNVVDIIEEVFSDYNFPFEKRLATTYPILDFQVQYGETDFNFLQRLMEEWGIYWFFEH
CCCCHHHHHHHHHHHCCCCHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHCCEEEEEEC
QDHKQKLILVDHVGAHKRSFSTAYHAIEYLSDEPKAGEEYITQFQTQETLTSGTWVTNDY
CCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCEEECCC
DFTKSRADILAMDSKPRKTSFNDLEIYHWPGDYDQPDIGEHLSRVRIEERGALGSRAVGS
CCCCCCCCEEEECCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCC
GQLRGIVCGANFELKGFPVDKANREYMIISSRLTVAEVDQLSGGEDAFSCESSFTVQPTT
CCEEEEEECCCEEEECCCCCCCCCCEEEEECCCCHHHHHHCCCCCCCEECCCCEEECCCH
KIYRHPQVTPKPKTNGPQNAIIVGPPGEEIWTDEYGRVKVRFVWDRYGTNSESDSCWLRV
HHHCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCEEEEE
SQAWAGNSFGGIYIPRIGQEVIVDCINGDPDRPMVMGSLYNNVTRPPWDLPANATQSGMV
EECCCCCCCCCEECCCCCHHHHHHHHCCCCCCCEEEHHHHHCCCCCCCCCCCCCCCCCCE
SRTVGGGLTNYNGVRFEDKSGLEQYWEQAERDMSRLTKNNETQIIGADSVLNVGANRSEV
EHHCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCHHEECCCCCCEE
VGANYNQDVLGTSMLAIGAASMLQVGLARSVVVGGAHSLNVVLANATNVGGANMTNVGGF
ECCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEECCCCEEEEEEEECCCCCCCCCCCCCCC
NGLAVGGAHQTAVGGAATLAAGGPIAIGAGGELILSGDIVKIVGKSKVIIQGGEVHINSD
CCEEECCCCHHHCCCCEEECCCCCEEECCCCCEEECCCEEEEECCCEEEEECCEEEECCC
DCCGRKTGNGGGAFGAFASLAGLLPLAGAIALPLPLPVLPIVVPPVTSPPDPTVPPDPTL
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCC
PPDPTLPPDPTLPPDPTLPPETTAPPETTAPPETTAPPETTAPPETTAPPETTAPPETTA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PPETTAPPETTAPPETTAPPETTAPPETTAPPETTAPPETTAPPETTAPPETTAPPETTA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PPETTAPPETTAPPETTAPPETTAPPETTAPPETTAPPETTAPPETTAPPETTAPPETTA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PPEPTRTPPGTQTPPP
CCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PYLLGEPALVLSKLEGEEAFSTLYSYTITAKTPANPLIPWQAASNVDLKSLIGKEMTIE
CCCCCCHHHHHHHHCCHHHHHHHHEEEEEECCCCCCCCCCCCCCCCCHHHHCCCCEEEE
MELDGNGLGDVRSVGKGTREITGLVERARYIGRDANQAIFEITIKPWFYLANLTSDFKIY
EEECCCCCHHHHHHCCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCEEEEEECCCCEEEE
QNKNVVDIIEEVFSDYNFPFEKRLATTYPILDFQVQYGETDFNFLQRLMEEWGIYWFFEH
CCCCHHHHHHHHHHHCCCCHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHCCEEEEEEC
QDHKQKLILVDHVGAHKRSFSTAYHAIEYLSDEPKAGEEYITQFQTQETLTSGTWVTNDY
CCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCEEECCC
DFTKSRADILAMDSKPRKTSFNDLEIYHWPGDYDQPDIGEHLSRVRIEERGALGSRAVGS
CCCCCCCCEEEECCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCC
GQLRGIVCGANFELKGFPVDKANREYMIISSRLTVAEVDQLSGGEDAFSCESSFTVQPTT
CCEEEEEECCCEEEECCCCCCCCCCEEEEECCCCHHHHHHCCCCCCCEECCCCEEECCCH
KIYRHPQVTPKPKTNGPQNAIIVGPPGEEIWTDEYGRVKVRFVWDRYGTNSESDSCWLRV
HHHCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCEEEEE
SQAWAGNSFGGIYIPRIGQEVIVDCINGDPDRPMVMGSLYNNVTRPPWDLPANATQSGMV
EECCCCCCCCCEECCCCCHHHHHHHHCCCCCCCEEEHHHHHCCCCCCCCCCCCCCCCCCE
SRTVGGGLTNYNGVRFEDKSGLEQYWEQAERDMSRLTKNNETQIIGADSVLNVGANRSEV
EHHCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCHHEECCCCCCEE
VGANYNQDVLGTSMLAIGAASMLQVGLARSVVVGGAHSLNVVLANATNVGGANMTNVGGF
ECCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEECCCCEEEEEEEECCCCCCCCCCCCCCC
NGLAVGGAHQTAVGGAATLAAGGPIAIGAGGELILSGDIVKIVGKSKVIIQGGEVHINSD
CCEEECCCCHHHCCCCEEECCCCCEEECCCCCEEECCCEEEEECCCEEEEECCEEEECCC
DCCGRKTGNGGGAFGAFASLAGLLPLAGAIALPLPLPVLPIVVPPVTSPPDPTVPPDPTL
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCC
PPDPTLPPDPTLPPDPTLPPETTAPPETTAPPETTAPPETTAPPETTAPPETTAPPETTA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PPETTAPPETTAPPETTAPPETTAPPETTAPPETTAPPETTAPPETTAPPETTAPPETTA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PPETTAPPETTAPPETTAPPETTAPPETTAPPETTAPPETTAPPETTAPPETTAPPETTA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PPEPTRTPPGTQTPPP
CCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA