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The map label for this gene is ydiU [C]

Identifier: 153948973

GI number: 153948973

Start: 2002178

End: 2003629

Strand: Direct

Name: ydiU [C]

Synonym: YpsIP31758_1734

Alternate gene names: 153948973

Gene position: 2002178-2003629 (Clockwise)

Preceding gene: 153948776

Following gene: 153950097

Centisome position: 42.39

GC content: 49.1

Gene sequence:

>1452_bases
ATGGAATACGCCCCTGAATTCGATAACAGCTATGCGCGGCAGTTGAGTGGTTTTTACACCCGCTTGCAACCTACGCCATT
AAAAGGTGCCCGCTTGTTGTATCACAGCAAACCTCTGGCGCAAGAGTTAGGGCTGGATGCTCATTGGTTCACTGAACCAA
AGACTGCTGTGTGGGCGGGGGAAGCACTGTTACCCGGAATGGAGCCGCTAGCGCAGGTGTATAGCGGCCATCAATTTGGC
ATGTGGGCAGGGCAGCTTGGGGATGGCCGTGGGATCTTGTTAGGAGAACAGCGGCTTAATGATGGCCGCTATATGGATTG
GCATTTAAAAGGCGCTGGATTAACACCTTATTCCCGTATGGGGGATGGCCGGGCTGTCTTGCGTTCTGTGATACGTGAGT
TTTTGGCCTCCGAAGCATTACACCATTTAGGTATTCCAACCAGCCGTGCTCTGACAATTGTGACTAGCGATCATCCAATC
TACCGTGAGCAAACTGAACGAGGCGCGATGCTACTAAGGGTGGCGGAAAGCCATATTCGCTTCGGTCATTTCGAGCATTT
CTACTATCGGCAGCAACCTAAGCAAGTTCAACAATTAGCGGATTATGTTATTGCCCGCCACTGGCCGCAGTGGGTGGGGC
ACCAAGAATGCTACCGACTGTGGTTTACGGATGTGGTAGAGCGAACCGCGCGTTTAATGGCCCACTGGCAAACCGTCGGG
TTTGCTCATGGTGTGATGAATACCGATAATATGTCAATTCTTGGCATTACTATGGATTATGGCCCATTTGGTTTTCTCGA
TGACTATGTGCCTGGATATATCTGTAACCACTCCGACCATCAAGGGCGTTATGCTTATGATAATCAGCCTGCCGTAGCGT
TATGGAATTTGCATCGATTGGGGCACGCGTTGTCAGGTTTAATGTCTGCTGACCAATTGCAGTTGGCGCTAGAGGCTTAT
GAACCGGCACTTATGGTTGCTTATGGTGAACAGATGCGAGCCAAGTTAGGTTTTCTTGAGCGTGACAGCCAAGATAACGA
TTTGCTGACAGGTTTGTTGAGTTTGATGATCAAAGAAGGCCGGGATTATACCCGGACTTTCCGCTTATTGAGCGAAGTTG
AAGTACACTCTGCACAATCGCCATTGCGGGATGACTTTATCGATAGAGCCGCTTTTGACGACTGGTACCGCCGTTATCGT
TCACGGTTGCAGCAAGAATCCATCGATGATGATCAGCGCCAGCAATCGATGAAAGCGGCTAATCCTAAATATATATTACG
TAATTATTTGGCTCAGCAGGCGATTACTCAGGCAGAAAAAGATGATATTCAGCCACTTCAGCGGTTGCACCAGGCATTAC
AGCAACCGTTTACTGATCAACCTGAATTTGATGATTTAGCGGCGTTACCCCCAGATTGGGGAAAACACCTCGAGATCTCT
TGTTCCAGCTGA

Upstream 100 bases:

>100_bases
GCAAGCCTGCCATTGGCTGGTAGAAGTATTACGCTAATCTTTCAATTACCGTGGTTATTGGCCGCGCACAGCACTCGTGG
ACATAGAGATGAAACCCAGA

Downstream 100 bases:

>100_bases
CTTTTTATTCCATTTGGCACTTGTAATGTGCGCCATTACAGAGAATAGATCGCTGTTTTTTCGGAAAAAATAGGGATAGA
AAAAGTTAACCCGACAACGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 483; Mature: 483

Protein sequence:

>483_residues
MEYAPEFDNSYARQLSGFYTRLQPTPLKGARLLYHSKPLAQELGLDAHWFTEPKTAVWAGEALLPGMEPLAQVYSGHQFG
MWAGQLGDGRGILLGEQRLNDGRYMDWHLKGAGLTPYSRMGDGRAVLRSVIREFLASEALHHLGIPTSRALTIVTSDHPI
YREQTERGAMLLRVAESHIRFGHFEHFYYRQQPKQVQQLADYVIARHWPQWVGHQECYRLWFTDVVERTARLMAHWQTVG
FAHGVMNTDNMSILGITMDYGPFGFLDDYVPGYICNHSDHQGRYAYDNQPAVALWNLHRLGHALSGLMSADQLQLALEAY
EPALMVAYGEQMRAKLGFLERDSQDNDLLTGLLSLMIKEGRDYTRTFRLLSEVEVHSAQSPLRDDFIDRAAFDDWYRRYR
SRLQQESIDDDQRQQSMKAANPKYILRNYLAQQAITQAEKDDIQPLQRLHQALQQPFTDQPEFDDLAALPPDWGKHLEIS
CSS

Sequences:

>Translated_483_residues
MEYAPEFDNSYARQLSGFYTRLQPTPLKGARLLYHSKPLAQELGLDAHWFTEPKTAVWAGEALLPGMEPLAQVYSGHQFG
MWAGQLGDGRGILLGEQRLNDGRYMDWHLKGAGLTPYSRMGDGRAVLRSVIREFLASEALHHLGIPTSRALTIVTSDHPI
YREQTERGAMLLRVAESHIRFGHFEHFYYRQQPKQVQQLADYVIARHWPQWVGHQECYRLWFTDVVERTARLMAHWQTVG
FAHGVMNTDNMSILGITMDYGPFGFLDDYVPGYICNHSDHQGRYAYDNQPAVALWNLHRLGHALSGLMSADQLQLALEAY
EPALMVAYGEQMRAKLGFLERDSQDNDLLTGLLSLMIKEGRDYTRTFRLLSEVEVHSAQSPLRDDFIDRAAFDDWYRRYR
SRLQQESIDDDQRQQSMKAANPKYILRNYLAQQAITQAEKDDIQPLQRLHQALQQPFTDQPEFDDLAALPPDWGKHLEIS
CSS
>Mature_483_residues
MEYAPEFDNSYARQLSGFYTRLQPTPLKGARLLYHSKPLAQELGLDAHWFTEPKTAVWAGEALLPGMEPLAQVYSGHQFG
MWAGQLGDGRGILLGEQRLNDGRYMDWHLKGAGLTPYSRMGDGRAVLRSVIREFLASEALHHLGIPTSRALTIVTSDHPI
YREQTERGAMLLRVAESHIRFGHFEHFYYRQQPKQVQQLADYVIARHWPQWVGHQECYRLWFTDVVERTARLMAHWQTVG
FAHGVMNTDNMSILGITMDYGPFGFLDDYVPGYICNHSDHQGRYAYDNQPAVALWNLHRLGHALSGLMSADQLQLALEAY
EPALMVAYGEQMRAKLGFLERDSQDNDLLTGLLSLMIKEGRDYTRTFRLLSEVEVHSAQSPLRDDFIDRAAFDDWYRRYR
SRLQQESIDDDQRQQSMKAANPKYILRNYLAQQAITQAEKDDIQPLQRLHQALQQPFTDQPEFDDLAALPPDWGKHLEIS
CSS

Specific function: Unknown

COG id: COG0397

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0061 (SELO) family

Homologues:

Organism=Homo sapiens, GI32880229, Length=470, Percent_Identity=41.063829787234, Blast_Score=303, Evalue=3e-82,
Organism=Escherichia coli, GI1787999, Length=477, Percent_Identity=64.9895178197065, Blast_Score=649, Evalue=0.0,
Organism=Saccharomyces cerevisiae, GI6325034, Length=294, Percent_Identity=39.4557823129252, Blast_Score=203, Evalue=5e-53,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1840_YERPY (B1JJ37)

Other databases:

- EMBL:   CP000950
- RefSeq:   YP_001720584.1
- GeneID:   6089298
- GenomeReviews:   CP000950_GR
- KEGG:   ypy:YPK_1840
- HOGENOM:   HBG683993
- OMA:   FGSYNPR
- ProtClustDB:   PRK00029
- HAMAP:   MF_00692
- InterPro:   IPR003846

Pfam domain/function: PF02696 UPF0061

EC number: NA

Molecular weight: Translated: 55517; Mature: 55517

Theoretical pI: Translated: 6.31; Mature: 6.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEYAPEFDNSYARQLSGFYTRLQPTPLKGARLLYHSKPLAQELGLDAHWFTEPKTAVWAG
CCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCHHHHHCCCCEECCCCCHHEEEC
EALLPGMEPLAQVYSGHQFGMWAGQLGDGRGILLGEQRLNDGRYMDWHLKGAGLTPYSRM
CHHCCCHHHHHHHHCCCCCCCCCCCCCCCCEEEEEHHHCCCCCEEEEEECCCCCCCHHHC
GDGRAVLRSVIREFLASEALHHLGIPTSRALTIVTSDHPIYREQTERGAMLLRVAESHIR
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHH
FGHFEHFYYRQQPKQVQQLADYVIARHWPQWVGHQECYRLWFTDVVERTARLMAHWQTVG
HCCHHHHHHHCCHHHHHHHHHHHHHHHCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
FAHGVMNTDNMSILGITMDYGPFGFLDDYVPGYICNHSDHQGRYAYDNQPAVALWNLHRL
HHHCCCCCCCCEEEEEEECCCCCCCHHHCCCCEEECCCCCCCCCEECCCCCEEHHHHHHH
GHALSGLMSADQLQLALEAYEPALMVAYGEQMRAKLGFLERDSQDNDLLTGLLSLMIKEG
HHHHHHHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHCHHHCCCCCHHHHHHHHHHHHHCC
RDYTRTFRLLSEVEVHSAQSPLRDDFIDRAAFDDWYRRYRSRLQQESIDDDQRQQSMKAA
CHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHC
NPKYILRNYLAQQAITQAEKDDIQPLQRLHQALQQPFTDQPEFDDLAALPPDWGKHLEIS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEE
CSS
ECC
>Mature Secondary Structure
MEYAPEFDNSYARQLSGFYTRLQPTPLKGARLLYHSKPLAQELGLDAHWFTEPKTAVWAG
CCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCHHHHHCCCCEECCCCCHHEEEC
EALLPGMEPLAQVYSGHQFGMWAGQLGDGRGILLGEQRLNDGRYMDWHLKGAGLTPYSRM
CHHCCCHHHHHHHHCCCCCCCCCCCCCCCCEEEEEHHHCCCCCEEEEEECCCCCCCHHHC
GDGRAVLRSVIREFLASEALHHLGIPTSRALTIVTSDHPIYREQTERGAMLLRVAESHIR
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHH
FGHFEHFYYRQQPKQVQQLADYVIARHWPQWVGHQECYRLWFTDVVERTARLMAHWQTVG
HCCHHHHHHHCCHHHHHHHHHHHHHHHCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
FAHGVMNTDNMSILGITMDYGPFGFLDDYVPGYICNHSDHQGRYAYDNQPAVALWNLHRL
HHHCCCCCCCCEEEEEEECCCCCCCHHHCCCCEEECCCCCCCCCEECCCCCEEHHHHHHH
GHALSGLMSADQLQLALEAYEPALMVAYGEQMRAKLGFLERDSQDNDLLTGLLSLMIKEG
HHHHHHHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHCHHHCCCCCHHHHHHHHHHHHHCC
RDYTRTFRLLSEVEVHSAQSPLRDDFIDRAAFDDWYRRYRSRLQQESIDDDQRQQSMKAA
CHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHC
NPKYILRNYLAQQAITQAEKDDIQPLQRLHQALQQPFTDQPEFDDLAALPPDWGKHLEIS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEE
CSS
ECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA