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The map label for this gene is tsr [H]

Identifier: 153948954

GI number: 153948954

Start: 1153774

End: 1155465

Strand: Direct

Name: tsr [H]

Synonym: YpsIP31758_0967

Alternate gene names: 153948954

Gene position: 1153774-1155465 (Clockwise)

Preceding gene: 153950596

Following gene: 153948332

Centisome position: 24.43

GC content: 44.86

Gene sequence:

>1692_bases
ATGTTTTCACGCATAAATTATATTGTTAAAAAATATTTTGGCTACATTATGAGTAAACTTTCGCTTTCTGAATCTAAATT
GGGAATATTATTTGGTTTTACTTTAGTGATTAGTCTATTTTCTTTATTGCAGATCTTCTCCATAGGTTATTTATCTCATA
TTTTAAAGAGTACTAAAGCAAACGTAGAGATAACGCACCGTAATCATCAACAAGAGGCGTTGATGGATCGTGCGCGGATG
GAACTATTAATTGCCAGTGACAAGCTTAATCGTGCGGGCATTTATTATATGGAAGATAAAGAGACCGGCTCCGAAGGCAG
CTGGCAAAGTCTTCTCAATGAGGCATTGCAGTCATTGCAGCAATCTCAGGACAGCTATCTGCAGTTGCAGGCGGTTTCCG
CCCAAGACAGTAGACAAGAATTGAATGACCTTAAGGAGAGCTACCATCAGTTGTATCAGGGGCTGGCTGAAATAGCGCAG
GGGTTAGCGCAAAAGCACAATATTGACACCTTCTTTGAAGTGCCTATCCAAGGCTTTCAGAGCGACTTCACTGAGAAATA
CTACCGCTATTTACAGGAAAGTGAAAAGGGCAGCAGAGCTATGGATGAGCAGCTCTTGTCTTCACTGTCTTCAGCTAAAC
AGATCATTATTGGGGCACTGGCCATATTGTTGGTACTGGCTTTCTCTGCCTGGCTAGGCGTCACCCGTTGGATGATTGCG
CCCTTAAATCACCTTATCTCACGTATCAATAAGATTGCTGCCGGGGATTTATCACACCGTATTGAAGACACGTCTTTTGC
TTGCCGAGAAATTAGACAACTCACTTATAGCGTACGGCATATGCAAGAGGGGCTAGTTGCATTGGTTAGCCAGGTCCGAG
GAGGGGCTGAGGTGATTCTGACCGGAGTGAACCAGATTACGGCAGATAACCATCGTCTTTCTGAACAAACGCACTCACAA
ACTCAATCATTGGCAGTGACGGCGCAAAGTATGCAGCAGCTTACCGTCAGGGTTAAACAAAACTCCATGAGTGCCGAGCA
GGCGAATCATCTGGTGAATGAGGCTAGAGATACGGCCAGCCAGGGAGGAGAGATGATGTCTAATGTGGTGAGTTCAATGG
CCGATATTTCCACGGGTTCACGGGAGATAAGCGAAATTATTACACTTATTGAGTCGGTTGCTTTTCAGACCAATATTTTG
GCATTAAATGCAGCAATTGAAGCCGCTCATGCGGGTGAACACGGCCGTGGGTTCTCTGTTGTGGCACGTGAGGTCGGTAC
ATTGGCTCACCAAAGTGGCCATTCAGCACAAAATATTAAGCGCCTTATTCAGCATTCTGCCAACTCAGTTTCTACGGGGG
CCTCGCTGGTTAATCGTTCCGGTGAGAATTTACAGGCTATTATTGATGTGGTGAAGAAAGTCACCGATTTAATGGCGGAA
ATAACTACCGCATCACATTATCAAAGCAAAGGAATTGAGGAGATGGCCGCGCAGGTAGAGATGATTAATGGCGCAACAAA
ACAGAATGCAGCATTGGTTGAGCAATCTGCACACGCATCGGAAGTGTTGCAACAGCAGACCTTACAGCTTAATCAGTCGG
TAGCCCGCTTTCATTTACCTGTAGAAAAATACTCTCCTCTACGATTAGCAAAGGAGAGCACGATTGCTGCTATTGATTCA
CGCGTTAGTTAA

Upstream 100 bases:

>100_bases
TTCATTTAACTATCACAGCATAATGCTACTATTGCTGAAATATATCTGTCATAGTGAGCTGCTAGCATGGATATCTCTAT
CATGACCCAATGTGAATAAC

Downstream 100 bases:

>100_bases
CCTGTTGATCCAACCCGGTTGATTACCGAAATAATCGCCTGCAGGTACAACTGTCATCTTGCCTGCAGCATCTTGCAATA
TAAATGTTGGGAAGCCGTGC

Product: methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: MCP-I; Serine chemoreceptor protein [H]

Number of amino acids: Translated: 563; Mature: 563

Protein sequence:

>563_residues
MFSRINYIVKKYFGYIMSKLSLSESKLGILFGFTLVISLFSLLQIFSIGYLSHILKSTKANVEITHRNHQQEALMDRARM
ELLIASDKLNRAGIYYMEDKETGSEGSWQSLLNEALQSLQQSQDSYLQLQAVSAQDSRQELNDLKESYHQLYQGLAEIAQ
GLAQKHNIDTFFEVPIQGFQSDFTEKYYRYLQESEKGSRAMDEQLLSSLSSAKQIIIGALAILLVLAFSAWLGVTRWMIA
PLNHLISRINKIAAGDLSHRIEDTSFACREIRQLTYSVRHMQEGLVALVSQVRGGAEVILTGVNQITADNHRLSEQTHSQ
TQSLAVTAQSMQQLTVRVKQNSMSAEQANHLVNEARDTASQGGEMMSNVVSSMADISTGSREISEIITLIESVAFQTNIL
ALNAAIEAAHAGEHGRGFSVVAREVGTLAHQSGHSAQNIKRLIQHSANSVSTGASLVNRSGENLQAIIDVVKKVTDLMAE
ITTASHYQSKGIEEMAAQVEMINGATKQNAALVEQSAHASEVLQQQTLQLNQSVARFHLPVEKYSPLRLAKESTIAAIDS
RVS

Sequences:

>Translated_563_residues
MFSRINYIVKKYFGYIMSKLSLSESKLGILFGFTLVISLFSLLQIFSIGYLSHILKSTKANVEITHRNHQQEALMDRARM
ELLIASDKLNRAGIYYMEDKETGSEGSWQSLLNEALQSLQQSQDSYLQLQAVSAQDSRQELNDLKESYHQLYQGLAEIAQ
GLAQKHNIDTFFEVPIQGFQSDFTEKYYRYLQESEKGSRAMDEQLLSSLSSAKQIIIGALAILLVLAFSAWLGVTRWMIA
PLNHLISRINKIAAGDLSHRIEDTSFACREIRQLTYSVRHMQEGLVALVSQVRGGAEVILTGVNQITADNHRLSEQTHSQ
TQSLAVTAQSMQQLTVRVKQNSMSAEQANHLVNEARDTASQGGEMMSNVVSSMADISTGSREISEIITLIESVAFQTNIL
ALNAAIEAAHAGEHGRGFSVVAREVGTLAHQSGHSAQNIKRLIQHSANSVSTGASLVNRSGENLQAIIDVVKKVTDLMAE
ITTASHYQSKGIEEMAAQVEMINGATKQNAALVEQSAHASEVLQQQTLQLNQSVARFHLPVEKYSPLRLAKESTIAAIDS
RVS
>Mature_563_residues
MFSRINYIVKKYFGYIMSKLSLSESKLGILFGFTLVISLFSLLQIFSIGYLSHILKSTKANVEITHRNHQQEALMDRARM
ELLIASDKLNRAGIYYMEDKETGSEGSWQSLLNEALQSLQQSQDSYLQLQAVSAQDSRQELNDLKESYHQLYQGLAEIAQ
GLAQKHNIDTFFEVPIQGFQSDFTEKYYRYLQESEKGSRAMDEQLLSSLSSAKQIIIGALAILLVLAFSAWLGVTRWMIA
PLNHLISRINKIAAGDLSHRIEDTSFACREIRQLTYSVRHMQEGLVALVSQVRGGAEVILTGVNQITADNHRLSEQTHSQ
TQSLAVTAQSMQQLTVRVKQNSMSAEQANHLVNEARDTASQGGEMMSNVVSSMADISTGSREISEIITLIESVAFQTNIL
ALNAAIEAAHAGEHGRGFSVVAREVGTLAHQSGHSAQNIKRLIQHSANSVSTGASLVNRSGENLQAIIDVVKKVTDLMAE
ITTASHYQSKGIEEMAAQVEMINGATKQNAALVEQSAHASEVLQQQTLQLNQSVARFHLPVEKYSPLRLAKESTIAAIDS
RVS

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI2367378, Length=537, Percent_Identity=39.8510242085661, Blast_Score=336, Evalue=2e-93,
Organism=Escherichia coli, GI1788195, Length=545, Percent_Identity=33.9449541284404, Blast_Score=268, Evalue=5e-73,
Organism=Escherichia coli, GI1788194, Length=518, Percent_Identity=36.2934362934363, Blast_Score=248, Evalue=7e-67,
Organism=Escherichia coli, GI1787690, Length=324, Percent_Identity=43.5185185185185, Blast_Score=239, Evalue=5e-64,
Organism=Escherichia coli, GI1789453, Length=328, Percent_Identity=35.0609756097561, Blast_Score=183, Evalue=3e-47,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR003122
- InterPro:   IPR004091
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 62169; Mature: 62169

Theoretical pI: Translated: 6.65; Mature: 6.65

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFSRINYIVKKYFGYIMSKLSLSESKLGILFGFTLVISLFSLLQIFSIGYLSHILKSTKA
CCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
NVEITHRNHQQEALMDRARMELLIASDKLNRAGIYYMEDKETGSEGSWQSLLNEALQSLQ
CEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHH
QSQDSYLQLQAVSAQDSRQELNDLKESYHQLYQGLAEIAQGLAQKHNIDTFFEVPIQGFQ
HCHHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHH
SDFTEKYYRYLQESEKGSRAMDEQLLSSLSSAKQIIIGALAILLVLAFSAWLGVTRWMIA
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PLNHLISRINKIAAGDLSHRIEDTSFACREIRQLTYSVRHMQEGLVALVSQVRGGAEVIL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEE
TGVNQITADNHRLSEQTHSQTQSLAVTAQSMQQLTVRVKQNSMSAEQANHLVNEARDTAS
ECCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
QGGEMMSNVVSSMADISTGSREISEIITLIESVAFQTNILALNAAIEAAHAGEHGRGFSV
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH
VAREVGTLAHQSGHSAQNIKRLIQHSANSVSTGASLVNRSGENLQAIIDVVKKVTDLMAE
HHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
ITTASHYQSKGIEEMAAQVEMINGATKQNAALVEQSAHASEVLQQQTLQLNQSVARFHLP
HHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
VEKYSPLRLAKESTIAAIDSRVS
HHHCCCHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MFSRINYIVKKYFGYIMSKLSLSESKLGILFGFTLVISLFSLLQIFSIGYLSHILKSTKA
CCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
NVEITHRNHQQEALMDRARMELLIASDKLNRAGIYYMEDKETGSEGSWQSLLNEALQSLQ
CEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHH
QSQDSYLQLQAVSAQDSRQELNDLKESYHQLYQGLAEIAQGLAQKHNIDTFFEVPIQGFQ
HCHHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHH
SDFTEKYYRYLQESEKGSRAMDEQLLSSLSSAKQIIIGALAILLVLAFSAWLGVTRWMIA
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PLNHLISRINKIAAGDLSHRIEDTSFACREIRQLTYSVRHMQEGLVALVSQVRGGAEVIL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEE
TGVNQITADNHRLSEQTHSQTQSLAVTAQSMQQLTVRVKQNSMSAEQANHLVNEARDTAS
ECCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
QGGEMMSNVVSSMADISTGSREISEIITLIESVAFQTNILALNAAIEAAHAGEHGRGFSV
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH
VAREVGTLAHQSGHSAQNIKRLIQHSANSVSTGASLVNRSGENLQAIIDVVKKVTDLMAE
HHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
ITTASHYQSKGIEEMAAQVEMINGATKQNAALVEQSAHASEVLQQQTLQLNQSVARFHLP
HHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
VEKYSPLRLAKESTIAAIDSRVS
HHHCCCHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 6402709; 7610040; 9278503; 8384293; 6213619; 2033064; 10466731 [H]