| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is trpG
Identifier: 153948928
GI number: 153948928
Start: 2237617
End: 2238195
Strand: Direct
Name: trpG
Synonym: YpsIP31758_1933
Alternate gene names: 153948928
Gene position: 2237617-2238195 (Clockwise)
Preceding gene: 153947463
Following gene: 153948782
Centisome position: 47.37
GC content: 51.81
Gene sequence:
>579_bases ATGGCCGATATCCTACTGCTCGATAATATCGACTCCTTTACCTACAACCTGGTGGACCAACTTCGTTCCAGTGGTCATCG CGTCGTGATTTACCGTAACCACATTGCCGCCGATAACATTATTGAACGCTTGCAACAACTCGAACAACCGGTACTGATGT TGTCACCTGGCCCTGGAACACCAGCACAGGCAGGCTGTATGCCTGAGCTATTGCAACGCTTACAGGGCCAGTTACCGATG ATTGGTATTTGTCTGGGTCATCAAGCCATTATCGAAGCCTATGGCGGCCATGTTGGTCAAGCGGGTGAGATATTGCATGG TAAGGCCTCGGCGATTGAACATGATGGGCAAGGTATGTTTGCCGGTATGCCAAACCCATTACCGGTCGCCCGCTACCACT CCTTAGTCGGCAGTAATCTCCCCGCAGAATTAACCGTTAACGCCCGTTTTGGCGAGATGGTCATGGCGGTTCGTCATGAT GCTCACCGCGTTTGTGGCTACCAATTCCACCCGGAATCGATTTTAACCACCCACGGTGCGCGTTTACTTGAACAAACACT GGCCTGGGCGTTAGCGTAA
Upstream 100 bases:
>100_bases TGGACTCAGTTCCACAAGCAGAAGCTGATGAAACTCGGAATAAAGCCAGAGCCGTACTGCGCGCCATTGCCACTGCCCAT CATGCCAAGGAGATTTTCTA
Downstream 100 bases:
>100_bases TTAAGGAGTTTATGATGCAACATTTATTCGAAAAACTGTTCCGGGCTGAGTCAATGAGCCAAGAAGAAAGCCAACAACTG TTTGCGGCGATTGTACGTGG
Product: anthranilate synthase component II
Products: NA
Alternate protein names: Glutamine amido-transferase
Number of amino acids: Translated: 192; Mature: 191
Protein sequence:
>192_residues MADILLLDNIDSFTYNLVDQLRSSGHRVVIYRNHIAADNIIERLQQLEQPVLMLSPGPGTPAQAGCMPELLQRLQGQLPM IGICLGHQAIIEAYGGHVGQAGEILHGKASAIEHDGQGMFAGMPNPLPVARYHSLVGSNLPAELTVNARFGEMVMAVRHD AHRVCGYQFHPESILTTHGARLLEQTLAWALA
Sequences:
>Translated_192_residues MADILLLDNIDSFTYNLVDQLRSSGHRVVIYRNHIAADNIIERLQQLEQPVLMLSPGPGTPAQAGCMPELLQRLQGQLPM IGICLGHQAIIEAYGGHVGQAGEILHGKASAIEHDGQGMFAGMPNPLPVARYHSLVGSNLPAELTVNARFGEMVMAVRHD AHRVCGYQFHPESILTTHGARLLEQTLAWALA >Mature_191_residues ADILLLDNIDSFTYNLVDQLRSSGHRVVIYRNHIAADNIIERLQQLEQPVLMLSPGPGTPAQAGCMPELLQRLQGQLPMI GICLGHQAIIEAYGGHVGQAGEILHGKASAIEHDGQGMFAGMPNPLPVARYHSLVGSNLPAELTVNARFGEMVMAVRHDA HRVCGYQFHPESILTTHGARLLEQTLAWALA
Specific function: Tryptophan biosynthesis; first step. Tryptophan biosynthesis; second step. [C]
COG id: COG0512
COG function: function code EH; Anthranilate/para-aminobenzoate synthases component II
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutamine amidotransferase type-1 domain
Homologues:
Organism=Escherichia coli, GI1787517, Length=190, Percent_Identity=82.1052631578947, Blast_Score=332, Evalue=1e-92, Organism=Escherichia coli, GI1789760, Length=188, Percent_Identity=43.0851063829787, Blast_Score=149, Evalue=1e-37, Organism=Saccharomyces cerevisiae, GI6322638, Length=188, Percent_Identity=40.9574468085106, Blast_Score=150, Evalue=2e-37, Organism=Saccharomyces cerevisiae, GI6324361, Length=209, Percent_Identity=26.3157894736842, Blast_Score=66, Evalue=3e-12,
Paralogues:
None
Copy number: 945 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 900 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): TRPG_YERPE (Q8ZEG6)
Other databases:
- EMBL: AL590842 - EMBL: AE009952 - EMBL: AE017042 - PIR: AI0268 - RefSeq: NP_993344.1 - RefSeq: YP_002347178.1 - ProteinModelPortal: Q8ZEG6 - SMR: Q8ZEG6 - GeneID: 1175040 - GeneID: 2766189 - GenomeReviews: AE009952_GR - GenomeReviews: AE017042_GR - GenomeReviews: AL590842_GR - KEGG: ype:YPO2207 - KEGG: ypm:YP_2005 - HOGENOM: HBG292341 - OMA: YGGKVER - ProtClustDB: PRK05670 - BioCyc: YPES214092:YPO2207-MONOMER - BRENDA: 4.1.3.27 - InterPro: IPR006220 - InterPro: IPR001317 - InterPro: IPR011702 - InterPro: IPR017926 - InterPro: IPR000991 - InterPro: IPR006221 - PRINTS: PR00097 - PRINTS: PR00099 - PRINTS: PR00096 - TIGRFAMs: TIGR00566
Pfam domain/function: PF00117 GATase
EC number: =4.1.3.27
Molecular weight: Translated: 20882; Mature: 20751
Theoretical pI: Translated: 6.43; Mature: 6.43
Prosite motif: PS51273 GATASE_TYPE_1; PS00442 GATASE_TYPE_I
Important sites: ACT_SITE 84-84 ACT_SITE 170-170 ACT_SITE 172-172
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADILLLDNIDSFTYNLVDQLRSSGHRVVIYRNHIAADNIIERLQQLEQPVLMLSPGPGT CCCEEEECCCCHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHCCCEEEEECCCCC PAQAGCMPELLQRLQGQLPMIGICLGHQAIIEAYGGHVGQAGEILHGKASAIEHDGQGMF CCCCCCHHHHHHHHCCCCCEEEEEHHHHHHHHHHCCCCCCCCCCCCCCHHHEEECCCEEE AGMPNPLPVARYHSLVGSNLPAELTVNARFGEMVMAVRHDAHRVCGYQFHPESILTTHGA CCCCCCCCHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHHHHCCCEECCHHHHHHHHH RLLEQTLAWALA HHHHHHHHHHCC >Mature Secondary Structure ADILLLDNIDSFTYNLVDQLRSSGHRVVIYRNHIAADNIIERLQQLEQPVLMLSPGPGT CCEEEECCCCHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHCCCEEEEECCCCC PAQAGCMPELLQRLQGQLPMIGICLGHQAIIEAYGGHVGQAGEILHGKASAIEHDGQGMF CCCCCCHHHHHHHHCCCCCEEEEEHHHHHHHHHHCCCCCCCCCCCCCCHHHEEECCCEEE AGMPNPLPVARYHSLVGSNLPAELTVNARFGEMVMAVRHDAHRVCGYQFHPESILTTHGA CCCCCCCCHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHHHHCCCEECCHHHHHHHHH RLLEQTLAWALA HHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11586360; 12142430