| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is ureH [H]
Identifier: 153948871
GI number: 153948871
Start: 1289228
End: 1290286
Strand: Direct
Name: ureH [H]
Synonym: YpsIP31758_1085
Alternate gene names: 153948871
Gene position: 1289228-1290286 (Clockwise)
Preceding gene: 153948186
Following gene: 153949502
Centisome position: 27.3
GC content: 41.27
Gene sequence:
>1059_bases ATGACGACAATAATCGCCAGCAGCAGCGCCTTTGGTAATCAGCAAACAAAGCGCAGAGCCATCTACCTGCTAATCGGCCT GTTGGTGGTGAATGGGTTAGCTTGGGTCTGGGCTTTTGCTGAATTTAATGATAATGCCGTGCTGATGGGAATGGCTTTCC TGGCCTACAGTTTTGGTTTGCGCCATGCGGTTGATGCGGATCATATTGCGGCTATTGATAACGTCACGCGTAAACTCATG CAACAAGGTAAAACACCGATTGCTGTTGGGACTTTTTTCTCACTCGGCCATTCAACTATTGTGATCTTAGCTTCACTGGC AATTGCTGCGACCGCCATGGCATTTAAGAATAATATGGCGTGGTTTCACGAAACCGGTGGTTTAATCGGGACGTTGGTGT CATCCATTTTTTTATTGTTATTTGCTTTTCTCAATTTAACGATCCTGATTTCAGTGTATAAAAAATTCAAACAAGTTAAA GCTGGGCATATTTATAAAGATGAAGAGCTTGACCTTCTGGTCGTGAATAATGGTGGTCTGTTATCCAGAATGTTTAAACG TGTCTTTAATATGGTTAATAAAAGCTGGCATATGTATCCAGTTGGTTTTTTGTTTGGTTTAGGTTTTGATACCGCAACTG AAATTGGTGTTTTGGGGATATCAGCGGCCAGCGCCACTCACGGTATGAATTTGTGGTCGATAATGGTGTTTCCGATTTTA TTTGCGGCCGGAATGGCATTGATCGATTCACTGGATAATTTTGTGATGATTGGTGCTTATGGCTGGGCATTTTCTAAACC TGTTCGTAAACTTTATTACAATATCACTATCACCGCCGCGTCGGTGATTATTGCTTTCTTTATCGGTGGCATTGAAGCCT TGGGTTTGATTGCCGATAAGTTAAATTTAACTGGTGGTATCTGGACGCCAATTAATAATATCAGCGAGAACTTAGGTCAG ATCGGTTACTGGATTATAGGGATGTTTATATGTTGCTGGTTAGTTTCTATTATTAATTACTATGTCCGTGGTTATGACAA GCTAAATATAAGCCGCTAA
Upstream 100 bases:
>100_bases TTTATCGATCATATAGACCTCAAATTATTGGCGTTATCGTGTTGTCAGCGATAACGCCAGGTCAGAACGGGTAGGGTTGA AAATAATCTGGAGTGCGAAT
Downstream 100 bases:
>100_bases GTCATATTTGTTGCGAGTGAATTATTAGACCCGCTGACACAATAATTTGTAATTGCGTTGGTTAGGGAAGGCTAACAAAT AGAGACACTCATTAACCGAT
Product: high-affinity nickel transport protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 352; Mature: 351
Protein sequence:
>352_residues MTTIIASSSAFGNQQTKRRAIYLLIGLLVVNGLAWVWAFAEFNDNAVLMGMAFLAYSFGLRHAVDADHIAAIDNVTRKLM QQGKTPIAVGTFFSLGHSTIVILASLAIAATAMAFKNNMAWFHETGGLIGTLVSSIFLLLFAFLNLTILISVYKKFKQVK AGHIYKDEELDLLVVNNGGLLSRMFKRVFNMVNKSWHMYPVGFLFGLGFDTATEIGVLGISAASATHGMNLWSIMVFPIL FAAGMALIDSLDNFVMIGAYGWAFSKPVRKLYYNITITAASVIIAFFIGGIEALGLIADKLNLTGGIWTPINNISENLGQ IGYWIIGMFICCWLVSIINYYVRGYDKLNISR
Sequences:
>Translated_352_residues MTTIIASSSAFGNQQTKRRAIYLLIGLLVVNGLAWVWAFAEFNDNAVLMGMAFLAYSFGLRHAVDADHIAAIDNVTRKLM QQGKTPIAVGTFFSLGHSTIVILASLAIAATAMAFKNNMAWFHETGGLIGTLVSSIFLLLFAFLNLTILISVYKKFKQVK AGHIYKDEELDLLVVNNGGLLSRMFKRVFNMVNKSWHMYPVGFLFGLGFDTATEIGVLGISAASATHGMNLWSIMVFPIL FAAGMALIDSLDNFVMIGAYGWAFSKPVRKLYYNITITAASVIIAFFIGGIEALGLIADKLNLTGGIWTPINNISENLGQ IGYWIIGMFICCWLVSIINYYVRGYDKLNISR >Mature_351_residues TTIIASSSAFGNQQTKRRAIYLLIGLLVVNGLAWVWAFAEFNDNAVLMGMAFLAYSFGLRHAVDADHIAAIDNVTRKLMQ QGKTPIAVGTFFSLGHSTIVILASLAIAATAMAFKNNMAWFHETGGLIGTLVSSIFLLLFAFLNLTILISVYKKFKQVKA GHIYKDEELDLLVVNNGGLLSRMFKRVFNMVNKSWHMYPVGFLFGLGFDTATEIGVLGISAASATHGMNLWSIMVFPILF AAGMALIDSLDNFVMIGAYGWAFSKPVRKLYYNITITAASVIIAFFIGGIEALGLIADKLNLTGGIWTPINNISENLGQI GYWIIGMFICCWLVSIINYYVRGYDKLNISR
Specific function: High-affinity nickel transporter responsible for nickel uptake. Necessary for high levels of activity of hydrogenase and urease [H]
COG id: COG3376
COG function: function code P; High-affinity nickel permease
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the NiCoT transporter (TC 2.A.52) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004688 - InterPro: IPR011541 [H]
Pfam domain/function: PF03824 NicO [H]
EC number: NA
Molecular weight: Translated: 38694; Mature: 38563
Theoretical pI: Translated: 9.53; Mature: 9.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTIIASSSAFGNQQTKRRAIYLLIGLLVVNGLAWVWAFAEFNDNAVLMGMAFLAYSFGL CCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH RHAVDADHIAAIDNVTRKLMQQGKTPIAVGTFFSLGHSTIVILASLAIAATAMAFKNNMA HHCCCHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCC WFHETGGLIGTLVSSIFLLLFAFLNLTILISVYKKFKQVKAGHIYKDEELDLLVVNNGGL EEHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCH LSRMFKRVFNMVNKSWHMYPVGFLFGLGFDTATEIGVLGISAASATHGMNLWSIMVFPIL HHHHHHHHHHHHCCCCCEEHHHHHHHCCCCCHHHHHEEEEEHHHHHCCCHHHHHHHHHHH FAAGMALIDSLDNFVMIGAYGWAFSKPVRKLYYNITITAASVIIAFFIGGIEALGLIADK HHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LNLTGGIWTPINNISENLGQIGYWIIGMFICCWLVSIINYYVRGYDKLNISR HCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure TTIIASSSAFGNQQTKRRAIYLLIGLLVVNGLAWVWAFAEFNDNAVLMGMAFLAYSFGL CEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH RHAVDADHIAAIDNVTRKLMQQGKTPIAVGTFFSLGHSTIVILASLAIAATAMAFKNNMA HHCCCHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCC WFHETGGLIGTLVSSIFLLLFAFLNLTILISVYKKFKQVKAGHIYKDEELDLLVVNNGGL EEHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCH LSRMFKRVFNMVNKSWHMYPVGFLFGLGFDTATEIGVLGISAASATHGMNLWSIMVFPIL HHHHHHHHHHHHCCCCCEEHHHHHHHCCCCCHHHHHEEEEEHHHHHCCCHHHHHHHHHHH FAAGMALIDSLDNFVMIGAYGWAFSKPVRKLYYNITITAASVIIAFFIGGIEALGLIADK HHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LNLTGGIWTPINNISENLGQIGYWIIGMFICCWLVSIINYYVRGYDKLNISR HCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 1847142; 7896709; 12948488; 7934894 [H]