| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is 153948858
Identifier: 153948858
GI number: 153948858
Start: 3857702
End: 3858067
Strand: Reverse
Name: 153948858
Synonym: YpsIP31758_3425
Alternate gene names: NA
Gene position: 3858067-3857702 (Counterclockwise)
Preceding gene: 153947713
Following gene: 153948671
Centisome position: 81.68
GC content: 52.19
Gene sequence:
>366_bases ATGACAGCAGCCAATACTCGCGCAGGTGGGATCAGCTTTATCGGCAGTGACCCGATGATCCCGATATCTGCTCCCAACAC CGCGCCCAACGCCAATGGTATTCCTAATGTCAGCAACTATTTTTGCTGTGGGGGTAACGAACAGAATCTCAACACCATCC GTCCAGCCACGATAGACGGCGGATCTGTGATGGGGGCGGCCTCGGGGACACATTCGGCCAAGATGGACCCTATGCAGGGA TCAGGAAAGTATTTCATTCAGGGAAGCCCAGCAACACGTTTAGGAGATATGAGTATGACCAATAATTACAACGCGCCTTC GACGCAAATTGCGCCCAGCCAGACCAAGTATTTTGTCAATGCGTAG
Upstream 100 bases:
>100_bases TAGCGGATCAAAGCTTAATGATTAATAGCCGTATCGGATCATTAAATGCCTCTGCCGTGCTCAAAATCGACGGCGGACAG GTTCATATGGGGTAATCACG
Downstream 100 bases:
>100_bases CCTCTTTCGTGTGTTGCCTATTTTTATCCTGACAGGTTGCGTCCTGCTCAGCGGCTGTAGCTGGTTTTCCTCATCCTCAG AAGCGGCGCTACAGAAACGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 121; Mature: 120
Protein sequence:
>121_residues MTAANTRAGGISFIGSDPMIPISAPNTAPNANGIPNVSNYFCCGGNEQNLNTIRPATIDGGSVMGAASGTHSAKMDPMQG SGKYFIQGSPATRLGDMSMTNNYNAPSTQIAPSQTKYFVNA
Sequences:
>Translated_121_residues MTAANTRAGGISFIGSDPMIPISAPNTAPNANGIPNVSNYFCCGGNEQNLNTIRPATIDGGSVMGAASGTHSAKMDPMQG SGKYFIQGSPATRLGDMSMTNNYNAPSTQIAPSQTKYFVNA >Mature_120_residues TAANTRAGGISFIGSDPMIPISAPNTAPNANGIPNVSNYFCCGGNEQNLNTIRPATIDGGSVMGAASGTHSAKMDPMQGS GKYFIQGSPATRLGDMSMTNNYNAPSTQIAPSQTKYFVNA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12451; Mature: 12320
Theoretical pI: Translated: 8.20; Mature: 8.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 5.8 %Met (Translated Protein) 7.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 5.0 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAANTRAGGISFIGSDPMIPISAPNTAPNANGIPNVSNYFCCGGNEQNLNTIRPATIDG CCCCCCCCCCEEEECCCCEEEEECCCCCCCCCCCCCCCCEEEECCCCCCCCEECCEEECC GSVMGAASGTHSAKMDPMQGSGKYFIQGSPATRLGDMSMTNNYNAPSTQIAPSQTKYFVN CCEEECCCCCCCCCCCCCCCCCEEEEECCCCCEECCCCCCCCCCCCCCEECCCCCEEEEE A C >Mature Secondary Structure TAANTRAGGISFIGSDPMIPISAPNTAPNANGIPNVSNYFCCGGNEQNLNTIRPATIDG CCCCCCCCCEEEECCCCEEEEECCCCCCCCCCCCCCCCEEEECCCCCCCCEECCEEECC GSVMGAASGTHSAKMDPMQGSGKYFIQGSPATRLGDMSMTNNYNAPSTQIAPSQTKYFVN CCEEECCCCCCCCCCCCCCCCCEEEEECCCCCEECCCCCCCCCCCCCCEECCCCCEEEEE A C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA