| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is feoB [H]
Identifier: 153948842
GI number: 153948842
Start: 4470381
End: 4472696
Strand: Direct
Name: feoB [H]
Synonym: YpsIP31758_3985
Alternate gene names: 153948842
Gene position: 4470381-4472696 (Clockwise)
Preceding gene: 153948898
Following gene: 153948337
Centisome position: 94.65
GC content: 51.08
Gene sequence:
>2316_bases ATGAAAGCACTCACTATCGGCCTTATCGGCAACCCGAATGCGGGTAAAACCACGCTGTTTAACCAGTTAACCGGCGCCCG TCAGCGGGTGGGTAACTGGGCCGGGGTCACGGTGGAACGCAAAGAAGGCCACTTCAACACCGCCCAACATCAGGTGACAT TAGTTGACCTGCCAGGGACTTACTCTCTGACTACTATTTCTGAGCAAACGTCGCTGGATGAGCAAATTGCCTGTCACTAT ATTTTGAGTGGCGAAGCTGACCTGCTGATCAACGTGATTGATGCTGTCAACCTGGAGCGCAATCTCTACCTGACACTGCA ACTGTTGGAGTTAGGTATCCCGTGCATCGTGGCGCTGAATATGCTGGATATCGCCGAAAGCCAGCATATCGAAATTGATA TCAACACATTATCTAAAAAACTGGGTTGCCCGGTCATTCCATTGGTATCGACCCGTGGGCGTGGTATCGATGAATTAAAA AACAGTATTGATCAGTTTCAACCCGCCACTTGCCGTGCGCTGGTGAGCTATCCCCCCATTCTGCTAAGTGAAGTGGATAA ACTGGTCGCCGCGATGTCCGACGCCTTACCCATACAGCAACGCCGCTGGTTAGCGCTGCAAATTTTGGAAGGGGACATCT ACAGCCTGAACCGGGCGGGTGTCGCGCCCTCAATGGTTGAACAAGCCCGCCAACAGCTACGTGAACAGCAGCACGAAGAT CCGGCGCTGATTATCGCAGATGCCCGTTATCAAAGCATTGCTCACCTGTGTGAGGCCGTGGGTAATTCACAGCAGGCAGA GCCTAACCGCCTGACACAAGCGCTGGATAGCGTGATCCTTAACCGTTGGTTAGGGGTACCAATATTCCTGTTTGTGATGT ATTTGATGTTTGTATTGGCAATCAATATTGGCGGAGCGCTGCAACCCATCTTTGATATCGGTTCTGCCGCTATCTTTATC CAGGGTTTGCAATGGGTCGGCCATACGTTGCACTTCCCACCATGGCTGACTATTTTCCTCGCACAAGGTGTTGGCGGTGG GATTAACACCGTACTGCCATTAGTGCCACAGATCGGCATGATGTATCTGTTTCTCTCATTTCTGGAGGACTCGGGCTATA TGGCCCGCGCCGCGTTTGTGATGGACCGCTTAATGCAAGCGCTGGGATTGCCTGGTAAATCCTTTGTACCGCTGATTGTC GGTTTCGGCTGCAATGTCCCCTCAATCATGGGGGCACGTACCTTAGATGCCCAACGCGAGCGGTTAATCACCATCATGAT GGCCCCGTTTATGTCCTGTGGTGCGCGATTGGCTATTTTTGCGGTCTTCGCCGCAGCATTCTTCGGGCAGGACGGAGCGA GTATCGTCTTCTCACTCTATCTGTTAGGGATTGCGGTCGCCATTCTCACCGGTCTGGTTCTGAAATACACCATTATGCGT GGTGAAGCCTCGCCGTTCGTGATGGAGCTGCCGGTTTATCATGTGCCACACCTAAAGAGTTTGTTATTACAAACCTGGCA ACGATTAAAAGGTTTTGTGCTACGGGCCGGGAAAGTGATTGTAATTGCCAGTATTTTCATTGGCGGCCTGAATAGTTTCT CTTTCAACGGCAAACCCGTGGACAGTATCAATGACTCAGCATTGGCCTCAGTCAGTAAAGTGCTTACGCCATTGCTGATG CCCATGGGTATCCATGCCGATAACTGGCAGGCGACCGTCGGGCTAGTCACTGGAGCCATGGCAAAAGAAGTCGTGGTAGG GACGTTAAATACCCTTTATACCGCCGAGCAAATTAACAATGATCCCTTTGATGCAGAAAACTTTAATTTACTGGATGAGT TAGCAGGTGCCGTTGATGAAACCTGGCAGGGCTTAAAGGACACCTTTAGTCTTAGCGTGCTTGCTAACCCCATTGAAGCC AGTAAAGGTGACGGCGAGATGACTACCGGTTCAATGGGCATGATGAGCAGTAAGTTCGGTTCTAGTATCTCTGCCTATAG CTACCTGATTTTCGTGCTGCTGTATGTGCCTTGTGTCTCCGTGATGGGGGCGATAGCGCGCGAAACCAGCCGTGGCTGGA TGACCTTCTCCATATTGTGGGGGTTGAATGTGGCCTACTCGTTGGCCACCTTGTTCTATCAGGGGGCCACCCTCCGCGAT CATCCACAGGAGAGCCTGAGTATTATTGCGTTAGTCATTGTGGTTAATGCGTTGATCTTATTTGGTTTACGCCGTGCCCG TAGCCGGGTCACCGTCAGATTACAAAACAGTGAACCTACTAATTGCTGCCGAAGTAGTGGCAGCAACTGCCATTGA
Upstream 100 bases:
>100_bases CCCCAATAACTCAGGTCTGCGCCCTATTTCTATCTGCGCTGCGGTTTGAAAAAATAGCCTCGCGCAGTTTGATTTTAATT TATTGATATCACGTTGGATC
Downstream 100 bases:
>100_bases TCACCCATTAGCCAGCCGTAAAAAGAGGGGGAACGATGGCCAGCCTACTGCAACTACGTGATGCGATTGCCCTCAACGGC AGCGCTGAAGCCAGCCAGCT
Product: ferrous iron transport protein B
Products: Fe (II) [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 771; Mature: 771
Protein sequence:
>771_residues MKALTIGLIGNPNAGKTTLFNQLTGARQRVGNWAGVTVERKEGHFNTAQHQVTLVDLPGTYSLTTISEQTSLDEQIACHY ILSGEADLLINVIDAVNLERNLYLTLQLLELGIPCIVALNMLDIAESQHIEIDINTLSKKLGCPVIPLVSTRGRGIDELK NSIDQFQPATCRALVSYPPILLSEVDKLVAAMSDALPIQQRRWLALQILEGDIYSLNRAGVAPSMVEQARQQLREQQHED PALIIADARYQSIAHLCEAVGNSQQAEPNRLTQALDSVILNRWLGVPIFLFVMYLMFVLAINIGGALQPIFDIGSAAIFI QGLQWVGHTLHFPPWLTIFLAQGVGGGINTVLPLVPQIGMMYLFLSFLEDSGYMARAAFVMDRLMQALGLPGKSFVPLIV GFGCNVPSIMGARTLDAQRERLITIMMAPFMSCGARLAIFAVFAAAFFGQDGASIVFSLYLLGIAVAILTGLVLKYTIMR GEASPFVMELPVYHVPHLKSLLLQTWQRLKGFVLRAGKVIVIASIFIGGLNSFSFNGKPVDSINDSALASVSKVLTPLLM PMGIHADNWQATVGLVTGAMAKEVVVGTLNTLYTAEQINNDPFDAENFNLLDELAGAVDETWQGLKDTFSLSVLANPIEA SKGDGEMTTGSMGMMSSKFGSSISAYSYLIFVLLYVPCVSVMGAIARETSRGWMTFSILWGLNVAYSLATLFYQGATLRD HPQESLSIIALVIVVNALILFGLRRARSRVTVRLQNSEPTNCCRSSGSNCH
Sequences:
>Translated_771_residues MKALTIGLIGNPNAGKTTLFNQLTGARQRVGNWAGVTVERKEGHFNTAQHQVTLVDLPGTYSLTTISEQTSLDEQIACHY ILSGEADLLINVIDAVNLERNLYLTLQLLELGIPCIVALNMLDIAESQHIEIDINTLSKKLGCPVIPLVSTRGRGIDELK NSIDQFQPATCRALVSYPPILLSEVDKLVAAMSDALPIQQRRWLALQILEGDIYSLNRAGVAPSMVEQARQQLREQQHED PALIIADARYQSIAHLCEAVGNSQQAEPNRLTQALDSVILNRWLGVPIFLFVMYLMFVLAINIGGALQPIFDIGSAAIFI QGLQWVGHTLHFPPWLTIFLAQGVGGGINTVLPLVPQIGMMYLFLSFLEDSGYMARAAFVMDRLMQALGLPGKSFVPLIV GFGCNVPSIMGARTLDAQRERLITIMMAPFMSCGARLAIFAVFAAAFFGQDGASIVFSLYLLGIAVAILTGLVLKYTIMR GEASPFVMELPVYHVPHLKSLLLQTWQRLKGFVLRAGKVIVIASIFIGGLNSFSFNGKPVDSINDSALASVSKVLTPLLM PMGIHADNWQATVGLVTGAMAKEVVVGTLNTLYTAEQINNDPFDAENFNLLDELAGAVDETWQGLKDTFSLSVLANPIEA SKGDGEMTTGSMGMMSSKFGSSISAYSYLIFVLLYVPCVSVMGAIARETSRGWMTFSILWGLNVAYSLATLFYQGATLRD HPQESLSIIALVIVVNALILFGLRRARSRVTVRLQNSEPTNCCRSSGSNCH >Mature_771_residues MKALTIGLIGNPNAGKTTLFNQLTGARQRVGNWAGVTVERKEGHFNTAQHQVTLVDLPGTYSLTTISEQTSLDEQIACHY ILSGEADLLINVIDAVNLERNLYLTLQLLELGIPCIVALNMLDIAESQHIEIDINTLSKKLGCPVIPLVSTRGRGIDELK NSIDQFQPATCRALVSYPPILLSEVDKLVAAMSDALPIQQRRWLALQILEGDIYSLNRAGVAPSMVEQARQQLREQQHED PALIIADARYQSIAHLCEAVGNSQQAEPNRLTQALDSVILNRWLGVPIFLFVMYLMFVLAINIGGALQPIFDIGSAAIFI QGLQWVGHTLHFPPWLTIFLAQGVGGGINTVLPLVPQIGMMYLFLSFLEDSGYMARAAFVMDRLMQALGLPGKSFVPLIV GFGCNVPSIMGARTLDAQRERLITIMMAPFMSCGARLAIFAVFAAAFFGQDGASIVFSLYLLGIAVAILTGLVLKYTIMR GEASPFVMELPVYHVPHLKSLLLQTWQRLKGFVLRAGKVIVIASIFIGGLNSFSFNGKPVDSINDSALASVSKVLTPLLM PMGIHADNWQATVGLVTGAMAKEVVVGTLNTLYTAEQINNDPFDAENFNLLDELAGAVDETWQGLKDTFSLSVLANPIEA SKGDGEMTTGSMGMMSSKFGSSISAYSYLIFVLLYVPCVSVMGAIARETSRGWMTFSILWGLNVAYSLATLFYQGATLRD HPQESLSIIALVIVVNALILFGLRRARSRVTVRLQNSEPTNCCRSSGSNCH
Specific function: GTP-driven Fe(2+) uptake system [H]
COG id: COG0370
COG function: function code P; Fe2+ transport system protein B
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the feoB (TC 9.A.8) family [H]
Homologues:
Organism=Escherichia coli, GI1789813, Length=774, Percent_Identity=74.4186046511628, Blast_Score=1144, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003373 - InterPro: IPR011640 - InterPro: IPR011619 - InterPro: IPR011642 - InterPro: IPR005225 [H]
Pfam domain/function: PF07664 FeoB_C; PF02421 FeoB_N; PF07670 Gate [H]
EC number: NA
Molecular weight: Translated: 83920; Mature: 83920
Theoretical pI: Translated: 6.20; Mature: 6.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKALTIGLIGNPNAGKTTLFNQLTGARQRVGNWAGVTVERKEGHFNTAQHQVTLVDLPGT CCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCEEEEEECCCC YSLTTISEQTSLDEQIACHYILSGEADLLINVIDAVNLERNLYLTLQLLELGIPCIVALN EEEEEECHHHCCHHHHHEEEEECCCHHHHHHHHHHHCCCCCCEEEEEHHHHCCHHHHHHH MLDIAESQHIEIDINTLSKKLGCPVIPLVSTRGRGIDELKNSIDQFQPATCRALVSYPPI HHHHCCCCEEEEEHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHCCCHHHHHHHHCCCH LLSEVDKLVAAMSDALPIQQRRWLALQILEGDIYSLNRAGVAPSMVEQARQQLREQQHED HHHHHHHHHHHHHHCCCCHHCCEEEEEEECCCHHCCCCCCCCHHHHHHHHHHHHHHCCCC PALIIADARYQSIAHLCEAVGNSQQAEPNRLTQALDSVILNRWLGVPIFLFVMYLMFVLA CEEEEECHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH INIGGALQPIFDIGSAAIFIQGLQWVGHTLHFPPWLTIFLAQGVGGGINTVLPLVPQIGM HCCCCCHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHH MYLFLSFLEDSGYMARAAFVMDRLMQALGLPGKSFVPLIVGFGCNVPSIMGARTLDAQRE HHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHEECCCCCCHHHCCHHHHHHHH RLITIMMAPFMSCGARLAIFAVFAAAFFGQDGASIVFSLYLLGIAVAILTGLVLKYTIMR HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC GEASPFVMELPVYHVPHLKSLLLQTWQRLKGFVLRAGKVIVIASIFIGGLNSFSFNGKPV CCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHCCCCCCCCCCCCC DSINDSALASVSKVLTPLLMPMGIHADNWQATVGLVTGAMAKEVVVGTLNTLYTAEQINN CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC DPFDAENFNLLDELAGAVDETWQGLKDTFSLSVLANPIEASKGDGEMTTGSMGMMSSKFG CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCHHHHHHHHC SSISAYSYLIFVLLYVPCVSVMGAIARETSRGWMTFSILWGLNVAYSLATLFYQGATLRD CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHCCCCCCC HPQESLSIIALVIVVNALILFGLRRARSRVTVRLQNSEPTNCCRSSGSNCH CCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCHHHHCCCCCCC >Mature Secondary Structure MKALTIGLIGNPNAGKTTLFNQLTGARQRVGNWAGVTVERKEGHFNTAQHQVTLVDLPGT CCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCEEEEEECCCC YSLTTISEQTSLDEQIACHYILSGEADLLINVIDAVNLERNLYLTLQLLELGIPCIVALN EEEEEECHHHCCHHHHHEEEEECCCHHHHHHHHHHHCCCCCCEEEEEHHHHCCHHHHHHH MLDIAESQHIEIDINTLSKKLGCPVIPLVSTRGRGIDELKNSIDQFQPATCRALVSYPPI HHHHCCCCEEEEEHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHCCCHHHHHHHHCCCH LLSEVDKLVAAMSDALPIQQRRWLALQILEGDIYSLNRAGVAPSMVEQARQQLREQQHED HHHHHHHHHHHHHHCCCCHHCCEEEEEEECCCHHCCCCCCCCHHHHHHHHHHHHHHCCCC PALIIADARYQSIAHLCEAVGNSQQAEPNRLTQALDSVILNRWLGVPIFLFVMYLMFVLA CEEEEECHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH INIGGALQPIFDIGSAAIFIQGLQWVGHTLHFPPWLTIFLAQGVGGGINTVLPLVPQIGM HCCCCCHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHH MYLFLSFLEDSGYMARAAFVMDRLMQALGLPGKSFVPLIVGFGCNVPSIMGARTLDAQRE HHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHEECCCCCCHHHCCHHHHHHHH RLITIMMAPFMSCGARLAIFAVFAAAFFGQDGASIVFSLYLLGIAVAILTGLVLKYTIMR HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC GEASPFVMELPVYHVPHLKSLLLQTWQRLKGFVLRAGKVIVIASIFIGGLNSFSFNGKPV CCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHCCCCCCCCCCCCC DSINDSALASVSKVLTPLLMPMGIHADNWQATVGLVTGAMAKEVVVGTLNTLYTAEQINN CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC DPFDAENFNLLDELAGAVDETWQGLKDTFSLSVLANPIEASKGDGEMTTGSMGMMSSKFG CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCHHHHHHHHC SSISAYSYLIFVLLYVPCVSVMGAIARETSRGWMTFSILWGLNVAYSLATLFYQGATLRD CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHCCCCCCC HPQESLSIIALVIVVNALILFGLRRARSRVTVRLQNSEPTNCCRSSGSNCH CCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Fe (II) [Periplasm] [C]
Specific reaction: Fe (II) [Periplasm] = Fe (II) [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]