| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is yiiQ [H]
Identifier: 153948825
GI number: 153948825
Start: 103625
End: 104239
Strand: Reverse
Name: yiiQ [H]
Synonym: YpsIP31758_0097
Alternate gene names: 153948825
Gene position: 104239-103625 (Counterclockwise)
Preceding gene: 153949807
Following gene: 153950628
Centisome position: 2.21
GC content: 45.53
Gene sequence:
>615_bases ATGCGGATAATATTGTTGCTGGCAGCATTGTTATTAATAACATTTATGTTGATAACAACGATCAACCACGCTCATGCCGA TCCTACCAATGACAGTAGCCCGCCAAAGGAAGGGGCTCCGCCAATTGCGCCCTACCTGCTTTTCAACGCTCCAACGTTTG ATTTGACCTTGGTTAAATTCCGCGAAAGTTATAATCGCGCCAATCCAACGCTGCCAATCAACGAATTTCATGCCATCACG GTAAAAGAAGATTCACCGCCACTGACACGGGCTGCCAGTAAAATTAATGAAAATCTTTATGCCTCAACCGCACTGGAGAA AGGCACAGGTAAGATAAAAACCTTACAAATTACCTACTTACCAATTAAAGGTAATGAAGAGAAAACCGCTAAACTGCTTG CAATCAACTACATGGCAGCCCTGATGCGTCAGTTTGAGCCGACATTGTCAGTAGCGCAAAGTCTCGCCAACGTGCAAAAG CTGCTGACAGAAGGCAAAGGCTCGCCTTTCTATGCCCATACTATTGGCGCAATCCGCTATGTGGTGGCAGATAACGGAGA AAAAGGGCTTACCTTCGCAGTTGAACCGATTAAGCTGTCGCTATCTGAAGCATAA
Upstream 100 bases:
>100_bases ATCTTTGCGGTGAATTTTGACAATGACTACTGATTACCGCTTTAATCCTCTCTATACACTTCTAACGGCGGCCTAAGTCA TGAGAAAAGAAATCGTCTCA
Downstream 100 bases:
>100_bases TCTCACTGCAATTAATGACGAAAAGCAAAGCCATGACGACTAATCATCTCTATACTGTTGGACAGGTAAACTGCCTGTCA GGCAGTCATTATTATTGACC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 204; Mature: 204
Protein sequence:
>204_residues MRIILLLAALLLITFMLITTINHAHADPTNDSSPPKEGAPPIAPYLLFNAPTFDLTLVKFRESYNRANPTLPINEFHAIT VKEDSPPLTRAASKINENLYASTALEKGTGKIKTLQITYLPIKGNEEKTAKLLAINYMAALMRQFEPTLSVAQSLANVQK LLTEGKGSPFYAHTIGAIRYVVADNGEKGLTFAVEPIKLSLSEA
Sequences:
>Translated_204_residues MRIILLLAALLLITFMLITTINHAHADPTNDSSPPKEGAPPIAPYLLFNAPTFDLTLVKFRESYNRANPTLPINEFHAIT VKEDSPPLTRAASKINENLYASTALEKGTGKIKTLQITYLPIKGNEEKTAKLLAINYMAALMRQFEPTLSVAQSLANVQK LLTEGKGSPFYAHTIGAIRYVVADNGEKGLTFAVEPIKLSLSEA >Mature_204_residues MRIILLLAALLLITFMLITTINHAHADPTNDSSPPKEGAPPIAPYLLFNAPTFDLTLVKFRESYNRANPTLPINEFHAIT VKEDSPPLTRAASKINENLYASTALEKGTGKIKTLQITYLPIKGNEEKTAKLLAINYMAALMRQFEPTLSVAQSLANVQK LLTEGKGSPFYAHTIGAIRYVVADNGEKGLTFAVEPIKLSLSEA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1790354, Length=195, Percent_Identity=55.8974358974359, Blast_Score=209, Evalue=8e-56,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009918 [H]
Pfam domain/function: PF07305 DUF1454 [H]
EC number: NA
Molecular weight: Translated: 22292; Mature: 22292
Theoretical pI: Translated: 9.23; Mature: 9.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIILLLAALLLITFMLITTINHAHADPTNDSSPPKEGAPPIAPYLLFNAPTFDLTLVKF CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEHHHHH RESYNRANPTLPINEFHAITVKEDSPPLTRAASKINENLYASTALEKGTGKIKTLQITYL HHHHCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEE PIKGNEEKTAKLLAINYMAALMRQFEPTLSVAQSLANVQKLLTEGKGSPFYAHTIGAIRY EECCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHEEE VVADNGEKGLTFAVEPIKLSLSEA EEECCCCCCCEEEEEEEEEEECCC >Mature Secondary Structure MRIILLLAALLLITFMLITTINHAHADPTNDSSPPKEGAPPIAPYLLFNAPTFDLTLVKF CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEHHHHH RESYNRANPTLPINEFHAITVKEDSPPLTRAASKINENLYASTALEKGTGKIKTLQITYL HHHHCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEE PIKGNEEKTAKLLAINYMAALMRQFEPTLSVAQSLANVQKLLTEGKGSPFYAHTIGAIRY EECCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHEEE VVADNGEKGLTFAVEPIKLSLSEA EEECCCCCCCEEEEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8346018; 9278503 [H]