Click here to switch to the map view.

The map label for this gene is arpB [C]

Identifier: 153948798

GI number: 153948798

Start: 3684851

End: 3686134

Strand: Reverse

Name: arpB [C]

Synonym: YpsIP31758_3275

Alternate gene names: 153948798

Gene position: 3686134-3684851 (Counterclockwise)

Preceding gene: 153948499

Following gene: 153947188

Centisome position: 78.04

GC content: 39.8

Gene sequence:

>1284_bases
ATGCATATTGATCACTACAGCTTGCCCGTTTACGACAAAAACAATGGTGATAGCACCCTGAAGGAAACCGAATTATTTAA
AGAAGTCCCTTATTTATCTGCTCGGTTAGGGGAGCAGGCTTATGAGTATAGTGGTGGTGACATCAGTAATTATCATTTAT
CTATTCAATATATCATGGACGTTCTGGCTGATCAGGCTAAGGGTAAAGTGGATTTAAGCCATTTTTCCAGTGAGGAAACG
CTCTCTTCTCATGTTTCTCTTGAGAAAAATGAGCATAACTATCATTGCTTTAATCAGCATGCCAGTACTGTTTATCATAT
TAATAATAATGATTTTGGCCGCACGCTGGTTGATCTTTTTGAGCAGATGAACAATTCGGGTGAAAATGTTCGAGCATTAA
AAATTGATAGTTCTCAACATTCAATGGCTGCGCGTCTTTATATTAAAAACACGGAGCAAGGGCAGCGTTTCGTTGTTAAT
TTTTATGACCCTAATATCACGGATAAAACTGTGCGTTGTGAGGTGGATGACGCATTAAAATTGAATGGCTACTCATTAAG
AAATTTCATTAGTAACCAGACTTACTTATCCAGCTATGTTGATGCAGAGATATCATCAATTATTGTTTGTGATCAAGCCG
ATATCCATGATCAACATAAGGTGAAAGAGAACCGAGCGTTAACGCCATTATCACAGAGTTCACCTCTTCCTTTATCGGCA
GCACGATTGGATCTGTTGTTAACAGATAATTTTGCTGTGGGTATACAAAAAATGGCAGAAGAAGTTAAGAATCTATCAGA
ATCCGAGCGTAAGGTGTTTTTTAATCAGTTATTACAACCGAGGGCGAAGGATGACGTCCCTGGGTTGCAATGTGCTTTCA
TTCATCAGTGTTTTGAGGCGCTGGAAGCCTACGGTGAATTGTTGGCGCTTGCACCGCCAGAACAACGAGCAGATTTATTA
ACAGCAGAAAGCGAAAATGGTTATATCACTATGCCTTGGGTCATATCATCAGGGAATCCTGAGCTGGTGGATGCATTCTT
TACGTTGTCACGACTCCTTCCCTTGAACGATATGAATACGCTTATAGAGCAATACGTTAGTCTCATAGGAGAAGGTTCTG
AGTTGTTTGTAGAATTAGCTGAAATATATGAACAACAATCTGAGTTATTTACAAAAGAAGCTAAATTACATGCACAACAA
TCAGAAGTCGTTACACCATCGTCTGATGAGGAAGCTCCCGATGCACTTACATTGGTCAGTGATTCGGTGATTGAGCAGCG
CTAA

Upstream 100 bases:

>100_bases
TAATGGCTTAATCTCATTATTTTACCTTATACCGCTTGGCGTAAATGAACGGCATGATATGTAGATTGCTAACAAACAAG
ACTCTTCTATAAGGTAAAAT

Downstream 100 bases:

>100_bases
TACATCTGCAGACAACCCCCGATGACGCGATCTTGAATGGTGATGATAGGCCGAAGGGTAAAACGTCCGCGCCAGAGGTG
GCGCGGCTTGAATGGCATTC

Product: enterotoxin

Products: NA

Alternate protein names: ShET2 Enterotoxin Domain-Containing Protein

Number of amino acids: Translated: 427; Mature: 427

Protein sequence:

>427_residues
MHIDHYSLPVYDKNNGDSTLKETELFKEVPYLSARLGEQAYEYSGGDISNYHLSIQYIMDVLADQAKGKVDLSHFSSEET
LSSHVSLEKNEHNYHCFNQHASTVYHINNNDFGRTLVDLFEQMNNSGENVRALKIDSSQHSMAARLYIKNTEQGQRFVVN
FYDPNITDKTVRCEVDDALKLNGYSLRNFISNQTYLSSYVDAEISSIIVCDQADIHDQHKVKENRALTPLSQSSPLPLSA
ARLDLLLTDNFAVGIQKMAEEVKNLSESERKVFFNQLLQPRAKDDVPGLQCAFIHQCFEALEAYGELLALAPPEQRADLL
TAESENGYITMPWVISSGNPELVDAFFTLSRLLPLNDMNTLIEQYVSLIGEGSELFVELAEIYEQQSELFTKEAKLHAQQ
SEVVTPSSDEEAPDALTLVSDSVIEQR

Sequences:

>Translated_427_residues
MHIDHYSLPVYDKNNGDSTLKETELFKEVPYLSARLGEQAYEYSGGDISNYHLSIQYIMDVLADQAKGKVDLSHFSSEET
LSSHVSLEKNEHNYHCFNQHASTVYHINNNDFGRTLVDLFEQMNNSGENVRALKIDSSQHSMAARLYIKNTEQGQRFVVN
FYDPNITDKTVRCEVDDALKLNGYSLRNFISNQTYLSSYVDAEISSIIVCDQADIHDQHKVKENRALTPLSQSSPLPLSA
ARLDLLLTDNFAVGIQKMAEEVKNLSESERKVFFNQLLQPRAKDDVPGLQCAFIHQCFEALEAYGELLALAPPEQRADLL
TAESENGYITMPWVISSGNPELVDAFFTLSRLLPLNDMNTLIEQYVSLIGEGSELFVELAEIYEQQSELFTKEAKLHAQQ
SEVVTPSSDEEAPDALTLVSDSVIEQR
>Mature_427_residues
MHIDHYSLPVYDKNNGDSTLKETELFKEVPYLSARLGEQAYEYSGGDISNYHLSIQYIMDVLADQAKGKVDLSHFSSEET
LSSHVSLEKNEHNYHCFNQHASTVYHINNNDFGRTLVDLFEQMNNSGENVRALKIDSSQHSMAARLYIKNTEQGQRFVVN
FYDPNITDKTVRCEVDDALKLNGYSLRNFISNQTYLSSYVDAEISSIIVCDQADIHDQHKVKENRALTPLSQSSPLPLSA
ARLDLLLTDNFAVGIQKMAEEVKNLSESERKVFFNQLLQPRAKDDVPGLQCAFIHQCFEALEAYGELLALAPPEQRADLL
TAESENGYITMPWVISSGNPELVDAFFTLSRLLPLNDMNTLIEQYVSLIGEGSELFVELAEIYEQQSELFTKEAKLHAQQ
SEVVTPSSDEEAPDALTLVSDSVIEQR

Specific function: Unknown

COG id: COG0666

COG function: function code R; FOG: Ankyrin repeat

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790447, Length=349, Percent_Identity=24.6418338108883, Blast_Score=62, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48152; Mature: 48152

Theoretical pI: Translated: 4.38; Mature: 4.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHIDHYSLPVYDKNNGDSTLKETELFKEVPYLSARLGEQAYEYSGGDISNYHLSIQYIMD
CCCCCCCCCEEECCCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCEEEHHHHHHH
VLADQAKGKVDLSHFSSEETLSSHVSLEKNEHNYHCFNQHASTVYHINNNDFGRTLVDLF
HHHHHCCCCEEHHHCCCHHHHHHHCEEECCCCCCEEECCCCCEEEEECCCCHHHHHHHHH
EQMNNSGENVRALKIDSSQHSMAARLYIKNTEQGQRFVVNFYDPNITDKTVRCEVDDALK
HHHCCCCCCEEEEEECCCCCCEEEEEEEECCCCCCEEEEEEECCCCCCCEEEEECCCCEE
LNGYSLRNFISNQTYLSSYVDAEISSIIVCDQADIHDQHKVKENRALTPLSQSSPLPLSA
ECCHHHHHHHCCCHHHHHHHHHHHHEEEEECCCCCCHHHHHHHCCCCCCCCCCCCCCCHH
ARLDLLLTDNFAVGIQKMAEEVKNLSESERKVFFNQLLQPRAKDDVPGLQCAFIHQCFEA
HHEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH
LEAYGELLALAPPEQRADLLTAESENGYITMPWVISSGNPELVDAFFTLSRLLPLNDMNT
HHHHHHHEECCCCHHHCCEEEEECCCCEEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHH
LIEQYVSLIGEGSELFVELAEIYEQQSELFTKEAKLHAQQSEVVTPSSDEEAPDALTLVS
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHH
DSVIEQR
HHHHCCC
>Mature Secondary Structure
MHIDHYSLPVYDKNNGDSTLKETELFKEVPYLSARLGEQAYEYSGGDISNYHLSIQYIMD
CCCCCCCCCEEECCCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCEEEHHHHHHH
VLADQAKGKVDLSHFSSEETLSSHVSLEKNEHNYHCFNQHASTVYHINNNDFGRTLVDLF
HHHHHCCCCEEHHHCCCHHHHHHHCEEECCCCCCEEECCCCCEEEEECCCCHHHHHHHHH
EQMNNSGENVRALKIDSSQHSMAARLYIKNTEQGQRFVVNFYDPNITDKTVRCEVDDALK
HHHCCCCCCEEEEEECCCCCCEEEEEEEECCCCCCEEEEEEECCCCCCCEEEEECCCCEE
LNGYSLRNFISNQTYLSSYVDAEISSIIVCDQADIHDQHKVKENRALTPLSQSSPLPLSA
ECCHHHHHHHCCCHHHHHHHHHHHHEEEEECCCCCCHHHHHHHCCCCCCCCCCCCCCCHH
ARLDLLLTDNFAVGIQKMAEEVKNLSESERKVFFNQLLQPRAKDDVPGLQCAFIHQCFEA
HHEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH
LEAYGELLALAPPEQRADLLTAESENGYITMPWVISSGNPELVDAFFTLSRLLPLNDMNT
HHHHHHHEECCCCHHHCCEEEEECCCCEEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHH
LIEQYVSLIGEGSELFVELAEIYEQQSELFTKEAKLHAQQSEVVTPSSDEEAPDALTLVS
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHH
DSVIEQR
HHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA