| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is cusS [H]
Identifier: 153948780
GI number: 153948780
Start: 2394700
End: 2396085
Strand: Direct
Name: cusS [H]
Synonym: YpsIP31758_2085
Alternate gene names: 153948780
Gene position: 2394700-2396085 (Clockwise)
Preceding gene: 153947115
Following gene: 153948427
Centisome position: 50.7
GC content: 51.37
Gene sequence:
>1386_bases ATGATTAAGCGTTCTATCTCTGGGCGGCTGGCGCTAATGTTTGCCTTGGCCTCCATACTGATAGTTTCGGCTCTCGGTAT TGTACTGCGAAGCTCCTTGCATAATTCATTGCAAAAGCAGATGCATAACGAATTGCAATTCAGGGAGTCGCTGATGGCAC CGTGGATCCTCTCCCGTACCACGCTGGACGGCTGGCAAACGTTGGCGACCAAATTCACCGATTTGGCCGCTGCTGAGGGC GGCCGCGTACAATACTGGGTCCTCAGTGATGACCCCCAGCTTCAGGTAGGCGGCCCGGCACCCCGTGGTGTAACCTGGGC TTCGTTAAGCAAAGGATTCAGCAAAGTACCCGGTGCGACAGACGAGTCATGCTCCCTATTTCTACTGATGTCGGAAATTC CTGCCCAAGGTGAGCGCCCCGCTCTGCGCTATGTGGTCGCTATCGATTCCACGCCGTATATGGGTACTCTGAATGAATTT ACCCGCACGCTGATCGTCATTACTGCGATTAGCGTCTTATTCGTGGCACTGCTGGGGTTCGTGATTGCCAGAATAGGTAT GCGCCCTGTTAATAAACTCAGCGAACAGGCCCAGCACCTTGCGCCAGGAAATCACGGGCAGCGTCTGGATACCTTAACTC TGCCGGATGAACTGCAAAAACTGGCCGTCGCATTCAACGGCGTGCTCGAACGGCAGGAAATCGCCTGGCGGCAACTTGAA AGTTTTAATGCTGATGTCGCACATGAACTGAGAACCCCGTTGACCAATCTGATGGGGCAAACGCAATTAGGTCTATCTCG TAAACGTGAAACGCATGAGCTCGAAGATTTACTGGAGTCCAATCTGGAAGAACTCGAGAGAATGACCTCTATTGTTAACG ATATGCTGTTCCTCTCCCATGCTCAAGCTGGGGAGCACGCAACCCAGTTAACCGACGTGTCTCTTCGGGAAGAGACCTAT AAGACCACGGAGTATGTAGAACCTTCATTTGCCGAAAAAAATTTGTCTATTCATGTTGAGGGAGATATCACTGTACGCAT TGATCGGCGGCTTTTCCACCGCTCACTGGCGAATCTGCTAGAAAACAGCGCCCGCCATGCTGTTACTGGTACTACCGTGA AAGTGACGATCTCCAGAGAAAATAATCTGGCATCCATCGCGGTAGCCAACATTGGAGCTCCCATTGCGGCGGAACATCTA AACCGTTTGTTTGAGCGTTTTTATCGTGTTGATTCTTCCCGTGCACGCAGTGACACACACCATGGACTCGGGCTCTCCAT CGTCAGGGCGGTGGCGATAATGCATCGTGGAGATGTGTTTGCCAGTAGCCAGAATGGGATTAATACCTTTGGTCTGACCC TTGCAATAACTGACCCTTATATATAG
Upstream 100 bases:
>100_bases TAGATACGCCCTACCCGGTCAAACTGCTGCATACAGTGCGAGGCATGGGGTATGTCCTTGAAACTCGCCCCGAACGCCAG ACTAAATAGAGAGAGTGATC
Downstream 100 bases:
>100_bases ACAGTGAGTCCGTTGAAAAAGAAATGAGTCGTTATGTGAAGTCTGGCCTGGCTGAGCGAGGGTAACGTCTATGACAGTGT ATTTTTGCATACAGGTTTAA
Product: heavy metal sensor histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 461; Mature: 461
Protein sequence:
>461_residues MIKRSISGRLALMFALASILIVSALGIVLRSSLHNSLQKQMHNELQFRESLMAPWILSRTTLDGWQTLATKFTDLAAAEG GRVQYWVLSDDPQLQVGGPAPRGVTWASLSKGFSKVPGATDESCSLFLLMSEIPAQGERPALRYVVAIDSTPYMGTLNEF TRTLIVITAISVLFVALLGFVIARIGMRPVNKLSEQAQHLAPGNHGQRLDTLTLPDELQKLAVAFNGVLERQEIAWRQLE SFNADVAHELRTPLTNLMGQTQLGLSRKRETHELEDLLESNLEELERMTSIVNDMLFLSHAQAGEHATQLTDVSLREETY KTTEYVEPSFAEKNLSIHVEGDITVRIDRRLFHRSLANLLENSARHAVTGTTVKVTISRENNLASIAVANIGAPIAAEHL NRLFERFYRVDSSRARSDTHHGLGLSIVRAVAIMHRGDVFASSQNGINTFGLTLAITDPYI
Sequences:
>Translated_461_residues MIKRSISGRLALMFALASILIVSALGIVLRSSLHNSLQKQMHNELQFRESLMAPWILSRTTLDGWQTLATKFTDLAAAEG GRVQYWVLSDDPQLQVGGPAPRGVTWASLSKGFSKVPGATDESCSLFLLMSEIPAQGERPALRYVVAIDSTPYMGTLNEF TRTLIVITAISVLFVALLGFVIARIGMRPVNKLSEQAQHLAPGNHGQRLDTLTLPDELQKLAVAFNGVLERQEIAWRQLE SFNADVAHELRTPLTNLMGQTQLGLSRKRETHELEDLLESNLEELERMTSIVNDMLFLSHAQAGEHATQLTDVSLREETY KTTEYVEPSFAEKNLSIHVEGDITVRIDRRLFHRSLANLLENSARHAVTGTTVKVTISRENNLASIAVANIGAPIAAEHL NRLFERFYRVDSSRARSDTHHGLGLSIVRAVAIMHRGDVFASSQNGINTFGLTLAITDPYI >Mature_461_residues MIKRSISGRLALMFALASILIVSALGIVLRSSLHNSLQKQMHNELQFRESLMAPWILSRTTLDGWQTLATKFTDLAAAEG GRVQYWVLSDDPQLQVGGPAPRGVTWASLSKGFSKVPGATDESCSLFLLMSEIPAQGERPALRYVVAIDSTPYMGTLNEF TRTLIVITAISVLFVALLGFVIARIGMRPVNKLSEQAQHLAPGNHGQRLDTLTLPDELQKLAVAFNGVLERQEIAWRQLE SFNADVAHELRTPLTNLMGQTQLGLSRKRETHELEDLLESNLEELERMTSIVNDMLFLSHAQAGEHATQLTDVSLREETY KTTEYVEPSFAEKNLSIHVEGDITVRIDRRLFHRSLANLLENSARHAVTGTTVKVTISRENNLASIAVANIGAPIAAEHL NRLFERFYRVDSSRARSDTHHGLGLSIVRAVAIMHRGDVFASSQNGINTFGLTLAITDPYI
Specific function: Member of the two-component regulatory system CusS/CusR. Copper ion sensor. Could also be a silver ion sensor. Probably activates CusR by phosphorylation [H]
COG id: COG0642
COG function: function code T; Signal transduction histidine kinase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI1786783, Length=322, Percent_Identity=35.4037267080745, Blast_Score=209, Evalue=3e-55, Organism=Escherichia coli, GI1788279, Length=316, Percent_Identity=30.379746835443, Blast_Score=146, Evalue=3e-36, Organism=Escherichia coli, GI1788393, Length=259, Percent_Identity=31.6602316602317, Blast_Score=104, Evalue=1e-23, Organism=Escherichia coli, GI1786600, Length=250, Percent_Identity=28.4, Blast_Score=91, Evalue=2e-19, Organism=Escherichia coli, GI1787894, Length=305, Percent_Identity=27.5409836065574, Blast_Score=88, Evalue=1e-18, Organism=Escherichia coli, GI1790346, Length=262, Percent_Identity=27.8625954198473, Blast_Score=87, Evalue=3e-18, Organism=Escherichia coli, GI145693157, Length=212, Percent_Identity=27.8301886792453, Blast_Score=75, Evalue=9e-15, Organism=Escherichia coli, GI1789403, Length=289, Percent_Identity=26.2975778546713, Blast_Score=73, Evalue=3e-14, Organism=Escherichia coli, GI1790551, Length=310, Percent_Identity=27.741935483871, Blast_Score=69, Evalue=7e-13, Organism=Escherichia coli, GI1786912, Length=254, Percent_Identity=26.7716535433071, Blast_Score=69, Evalue=7e-13, Organism=Escherichia coli, GI1790861, Length=231, Percent_Identity=25.974025974026, Blast_Score=65, Evalue=7e-12, Organism=Escherichia coli, GI1788713, Length=231, Percent_Identity=25.974025974026, Blast_Score=63, Evalue=5e-11, Organism=Escherichia coli, GI1789808, Length=195, Percent_Identity=28.7179487179487, Blast_Score=62, Evalue=6e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR003660 - InterPro: IPR004358 - InterPro: IPR006290 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 51039; Mature: 51039
Theoretical pI: Translated: 6.81; Mature: 6.81
Prosite motif: PS50885 HAMP ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKRSISGRLALMFALASILIVSALGIVLRSSLHNSLQKQMHNELQFRESLMAPWILSRT CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHC TLDGWQTLATKFTDLAAAEGGRVQYWVLSDDPQLQVGGPAPRGVTWASLSKGFSKVPGAT CHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCEEECCCCCCCCCHHHHHCCHHHCCCCC DESCSLFLLMSEIPAQGERPALRYVVAIDSTPYMGTLNEFTRTLIVITAISVLFVALLGF CCCCEEEEEEECCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH VIARIGMRPVNKLSEQAQHLAPGNHGQRLDTLTLPDELQKLAVAFNGVLERQEIAWRQLE HHHHHCCCHHHHHHHHHHHCCCCCCCCEECEECCHHHHHHHHHHHHHHHHHHHHHHHHHH SFNADVAHELRTPLTNLMGQTQLGLSRKRETHELEDLLESNLEELERMTSIVNDMLFLSH HCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AQAGEHATQLTDVSLREETYKTTEYVEPSFAEKNLSIHVEGDITVRIDRRLFHRSLANLL HCCCCHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCEEEEECCEEEEEHHHHHHHHHHHHH ENSARHAVTGTTVKVTISRENNLASIAVANIGAPIAAEHLNRLFERFYRVDSSRARSDTH HCCCCCEEECCEEEEEEECCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHCCCCC HGLGLSIVRAVAIMHRGDVFASSQNGINTFGLTLAITDPYI CCCHHHHHHHHHHHHCCCEEECCCCCCEEEEEEEEEECCCC >Mature Secondary Structure MIKRSISGRLALMFALASILIVSALGIVLRSSLHNSLQKQMHNELQFRESLMAPWILSRT CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHC TLDGWQTLATKFTDLAAAEGGRVQYWVLSDDPQLQVGGPAPRGVTWASLSKGFSKVPGAT CHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCEEECCCCCCCCCHHHHHCCHHHCCCCC DESCSLFLLMSEIPAQGERPALRYVVAIDSTPYMGTLNEFTRTLIVITAISVLFVALLGF CCCCEEEEEEECCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH VIARIGMRPVNKLSEQAQHLAPGNHGQRLDTLTLPDELQKLAVAFNGVLERQEIAWRQLE HHHHHCCCHHHHHHHHHHHCCCCCCCCEECEECCHHHHHHHHHHHHHHHHHHHHHHHHHH SFNADVAHELRTPLTNLMGQTQLGLSRKRETHELEDLLESNLEELERMTSIVNDMLFLSH HCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AQAGEHATQLTDVSLREETYKTTEYVEPSFAEKNLSIHVEGDITVRIDRRLFHRSLANLL HCCCCHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCEEEEECCEEEEEHHHHHHHHHHHHH ENSARHAVTGTTVKVTISRENNLASIAVANIGAPIAAEHLNRLFERFYRVDSSRARSDTH HCCCCCEEECCEEEEEEECCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHCCCCC HGLGLSIVRAVAIMHRGDVFASSQNGINTFGLTLAITDPYI CCCHHHHHHHHHHHHCCCEEECCCCCCEEEEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]