| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is malZ [H]
Identifier: 153948761
GI number: 153948761
Start: 3521452
End: 3523281
Strand: Reverse
Name: malZ [H]
Synonym: YpsIP31758_3131
Alternate gene names: 153948761
Gene position: 3523281-3521452 (Counterclockwise)
Preceding gene: 153950351
Following gene: 153949352
Centisome position: 74.59
GC content: 50.33
Gene sequence:
>1830_bases ATGCTTAGTGGTTGGCACCTTCCGGTCTCGCCTTTTGTTCGTTTGGCAGACGACGCATTACATATCACGCTCTGGTTGCA AGGTGATAGTTTACCTGCGCAAGTCTTTCTGCGTTGTGAGCCAGATAATGAAGAGTGGCTGCTCACTATGGAGGGGCATG AGAGCCATGATCGTTGGCGCTATAGCGTTTCTTTACCGTTATATGAGGGGCAGCCAACCCGGCGCTACTGCTTCAAACTA TTATGGGATGACCACCAACAGTGGTTTGGCCCGTTGGGGTTCTCGGTGATTCTTCCAGCACAGTTGGCACAGTTTGCTGT AGATGTACCCGATAGCGGGCCTGATTGGGTCGCGGACCAAGTTTTTTATCAGATCTTCCCCGATCGCTTTGCCAGTAGTC AGGCAGATCATGGTGTGCAGGAGGGGAGTTATATTCATCACGCGGCCGGTTGCCCGGTATCTCGCCGCGAGTGGCAGCAG CCATTGGATGATGTGCATGCCGCATCGACATTTTATGGTGGCGATCTGGCCGGTATTAGTCAGAAAATCCCTTACTTTCA ACAACTGGGGGTTACGGCGCTGTATTTGAACCCCATTTTTACCGCTCCCAGTGTGCATAAATATGATACTGAAGATTATT ATCAGGTTGATCCCTACTTGGGGGGAGAGCGTGATTTCTTGCAATTGCGAGCCGCCACCCGTGAAGTAGGAATAAAGTTG GTGCTCGATGGCGTGTTTAACCACACGGGTGATTCTCATCGCTGGTTTGATCGCTATCAACAAGGGGAAAACGGCGCCTG CCATCACGAAGATTCGCCTTATCGTGGTTGGTTTACGTTCCTCCCTGATGGACGAGCATTAGATTGGAAAGGTAATGCTA GTTTGCCAAAACTTAATTTTGCCAATGAAGAGGTCGCTGAACGAATCTATCGCAGTGATGACAGCGTCGTGCGTTATTGG TTACGGCCACCATACAGTATTGATGGCTGGCGTCTGGATGTCGTACACATGCTCGGGGAAGATGGCGGCGCTAAAGGGAA TTTGCACCATCTGCACGGTATCTATCAGGCAGCAAAAGAAGAAAATCCGCAGGCTTATATTCTGGGCGAACATTTTGGCG ATGCACGTAATTGGTTGCACGCTGGCGTGGAAGACGCGGCAATGAATTATATGGGTTTTGCTTTGCCGGTCCGCAGTTTT CTAGCCGAGCTAGATGTGGCTTGCCATCCTATAAAATTGGATGCTGCGGATTGCGCCTACTGGATGGATGAGTACCGCGC AGGATTGCCCCATAGCCAGCAACTCCGTTTATTTAATCAATTAGATAGCCATGATACTGCCCGTTTTCTTACCTTATTAA AGGGTGATAAAACCCGTATGCAAATGGCGCTAATATGGTTGTTTAGTTGGATTGGTGTGCCTTGCCTATTTTATGGTGAT GAGATTGGGCTGGATGGCGGGAATGATCCGTTCTGCCGCAAACCGTTCCCGTGGGATGAGGCTCAGTGGGATCATGACCT ATTATCACTGTGCCAACGTATGGCGGCTTTACGCCACAAAAGTATAGCGTTGCGGCGCGGGGGGTGTCAGGTGATCCATG CCAGTGGTGATTCCCTGGTCTTTATTCGTAGTTATCAAACTGAGCGTGTGATGGTGGCGATACAACGTTCCGATGATGCG GATATTTTCCTGCCCGCCTCTCCTTTACTCAATGTGGCTGAGTGGCAGCGTCTGGAAGGTGGAGCAAACCTGGCTGTCAG TGAGACTGGCGTAAACATGGGGCTGGAGGGTAAGAGTGTTACCTTGTGGTGTGGTGTTGGTGAGTGCTAA
Upstream 100 bases:
>100_bases CATCAGGTTAACGTCTGTAGCAGGTTAGTGTTCGCACAAAGTTAATGTCTGCACCAGATAGTCTTCACAGGAATGGTTTT GGTTAAAGCAGGAGAATTTT
Downstream 100 bases:
>100_bases CTTGCAAAAGGCGCGGTGACGGATAACTCACTAGAGCAGCTCAGGGATAACAATTCAGTGATAACTGAGCTGTTTTTTCG CTCCAGTAAGATAATATTTA
Product: maltodextrin glucosidase
Products: NA
Alternate protein names: Alpha-glucosidase [H]
Number of amino acids: Translated: 609; Mature: 609
Protein sequence:
>609_residues MLSGWHLPVSPFVRLADDALHITLWLQGDSLPAQVFLRCEPDNEEWLLTMEGHESHDRWRYSVSLPLYEGQPTRRYCFKL LWDDHQQWFGPLGFSVILPAQLAQFAVDVPDSGPDWVADQVFYQIFPDRFASSQADHGVQEGSYIHHAAGCPVSRREWQQ PLDDVHAASTFYGGDLAGISQKIPYFQQLGVTALYLNPIFTAPSVHKYDTEDYYQVDPYLGGERDFLQLRAATREVGIKL VLDGVFNHTGDSHRWFDRYQQGENGACHHEDSPYRGWFTFLPDGRALDWKGNASLPKLNFANEEVAERIYRSDDSVVRYW LRPPYSIDGWRLDVVHMLGEDGGAKGNLHHLHGIYQAAKEENPQAYILGEHFGDARNWLHAGVEDAAMNYMGFALPVRSF LAELDVACHPIKLDAADCAYWMDEYRAGLPHSQQLRLFNQLDSHDTARFLTLLKGDKTRMQMALIWLFSWIGVPCLFYGD EIGLDGGNDPFCRKPFPWDEAQWDHDLLSLCQRMAALRHKSIALRRGGCQVIHASGDSLVFIRSYQTERVMVAIQRSDDA DIFLPASPLLNVAEWQRLEGGANLAVSETGVNMGLEGKSVTLWCGVGEC
Sequences:
>Translated_609_residues MLSGWHLPVSPFVRLADDALHITLWLQGDSLPAQVFLRCEPDNEEWLLTMEGHESHDRWRYSVSLPLYEGQPTRRYCFKL LWDDHQQWFGPLGFSVILPAQLAQFAVDVPDSGPDWVADQVFYQIFPDRFASSQADHGVQEGSYIHHAAGCPVSRREWQQ PLDDVHAASTFYGGDLAGISQKIPYFQQLGVTALYLNPIFTAPSVHKYDTEDYYQVDPYLGGERDFLQLRAATREVGIKL VLDGVFNHTGDSHRWFDRYQQGENGACHHEDSPYRGWFTFLPDGRALDWKGNASLPKLNFANEEVAERIYRSDDSVVRYW LRPPYSIDGWRLDVVHMLGEDGGAKGNLHHLHGIYQAAKEENPQAYILGEHFGDARNWLHAGVEDAAMNYMGFALPVRSF LAELDVACHPIKLDAADCAYWMDEYRAGLPHSQQLRLFNQLDSHDTARFLTLLKGDKTRMQMALIWLFSWIGVPCLFYGD EIGLDGGNDPFCRKPFPWDEAQWDHDLLSLCQRMAALRHKSIALRRGGCQVIHASGDSLVFIRSYQTERVMVAIQRSDDA DIFLPASPLLNVAEWQRLEGGANLAVSETGVNMGLEGKSVTLWCGVGEC >Mature_609_residues MLSGWHLPVSPFVRLADDALHITLWLQGDSLPAQVFLRCEPDNEEWLLTMEGHESHDRWRYSVSLPLYEGQPTRRYCFKL LWDDHQQWFGPLGFSVILPAQLAQFAVDVPDSGPDWVADQVFYQIFPDRFASSQADHGVQEGSYIHHAAGCPVSRREWQQ PLDDVHAASTFYGGDLAGISQKIPYFQQLGVTALYLNPIFTAPSVHKYDTEDYYQVDPYLGGERDFLQLRAATREVGIKL VLDGVFNHTGDSHRWFDRYQQGENGACHHEDSPYRGWFTFLPDGRALDWKGNASLPKLNFANEEVAERIYRSDDSVVRYW LRPPYSIDGWRLDVVHMLGEDGGAKGNLHHLHGIYQAAKEENPQAYILGEHFGDARNWLHAGVEDAAMNYMGFALPVRSF LAELDVACHPIKLDAADCAYWMDEYRAGLPHSQQLRLFNQLDSHDTARFLTLLKGDKTRMQMALIWLFSWIGVPCLFYGD EIGLDGGNDPFCRKPFPWDEAQWDHDLLSLCQRMAALRHKSIALRRGGCQVIHASGDSLVFIRSYQTERVMVAIQRSDDA DIFLPASPLLNVAEWQRLEGGANLAVSETGVNMGLEGKSVTLWCGVGEC
Specific function: May play a role in regulating the intracellular level of maltotriose. Cleaves glucose from the reducing end of maltotriose and longer maltodextrins with a chain length of up to 7 glucose units [H]
COG id: COG0366
COG function: function code G; Glycosidases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 13 family [H]
Homologues:
Organism=Homo sapiens, GI187423904, Length=377, Percent_Identity=24.6684350132626, Blast_Score=83, Evalue=6e-16, Organism=Escherichia coli, GI1786604, Length=608, Percent_Identity=57.2368421052632, Blast_Score=721, Evalue=0.0, Organism=Escherichia coli, GI1790687, Length=189, Percent_Identity=29.6296296296296, Blast_Score=81, Evalue=2e-16, Organism=Escherichia coli, GI1789995, Length=116, Percent_Identity=31.8965517241379, Blast_Score=65, Evalue=1e-11, Organism=Saccharomyces cerevisiae, GI6322245, Length=202, Percent_Identity=30.6930693069307, Blast_Score=86, Evalue=1e-17, Organism=Saccharomyces cerevisiae, GI6321726, Length=256, Percent_Identity=26.5625, Blast_Score=84, Evalue=9e-17, Organism=Saccharomyces cerevisiae, GI6322241, Length=265, Percent_Identity=25.2830188679245, Blast_Score=81, Evalue=4e-16, Organism=Saccharomyces cerevisiae, GI6322021, Length=265, Percent_Identity=25.2830188679245, Blast_Score=81, Evalue=4e-16, Organism=Saccharomyces cerevisiae, GI6324416, Length=265, Percent_Identity=25.2830188679245, Blast_Score=81, Evalue=4e-16, Organism=Saccharomyces cerevisiae, GI6321731, Length=267, Percent_Identity=24.3445692883895, Blast_Score=75, Evalue=3e-14, Organism=Saccharomyces cerevisiae, GI6319776, Length=267, Percent_Identity=24.3445692883895, Blast_Score=75, Evalue=4e-14, Organism=Drosophila melanogaster, GI24586589, Length=199, Percent_Identity=33.6683417085427, Blast_Score=93, Evalue=7e-19, Organism=Drosophila melanogaster, GI24583747, Length=257, Percent_Identity=29.5719844357977, Blast_Score=90, Evalue=4e-18, Organism=Drosophila melanogaster, GI24583749, Length=257, Percent_Identity=29.5719844357977, Blast_Score=90, Evalue=4e-18, Organism=Drosophila melanogaster, GI24586587, Length=198, Percent_Identity=30.3030303030303, Blast_Score=89, Evalue=9e-18, Organism=Drosophila melanogaster, GI24586599, Length=566, Percent_Identity=22.9681978798587, Blast_Score=88, Evalue=2e-17, Organism=Drosophila melanogaster, GI24583745, Length=433, Percent_Identity=24.0184757505774, Blast_Score=87, Evalue=3e-17, Organism=Drosophila melanogaster, GI24586591, Length=198, Percent_Identity=30.3030303030303, Blast_Score=86, Evalue=5e-17, Organism=Drosophila melanogaster, GI24586593, Length=257, Percent_Identity=28.7937743190661, Blast_Score=86, Evalue=7e-17, Organism=Drosophila melanogaster, GI24586597, Length=250, Percent_Identity=29.2, Blast_Score=85, Evalue=1e-16, Organism=Drosophila melanogaster, GI221330053, Length=254, Percent_Identity=26.7716535433071, Blast_Score=82, Evalue=1e-15, Organism=Drosophila melanogaster, GI45549022, Length=193, Percent_Identity=29.5336787564767, Blast_Score=82, Evalue=2e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013780 - InterPro: IPR006047 - InterPro: IPR004185 - InterPro: IPR006589 - InterPro: IPR017853 - InterPro: IPR013781 - InterPro: IPR013783 - InterPro: IPR014756 - InterPro: IPR017069 [H]
Pfam domain/function: PF00128 Alpha-amylase; PF02903 Alpha-amylase_N [H]
EC number: =3.2.1.20 [H]
Molecular weight: Translated: 69094; Mature: 69094
Theoretical pI: Translated: 5.09; Mature: 5.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSGWHLPVSPFVRLADDALHITLWLQGDSLPAQVFLRCEPDNEEWLLTMEGHESHDRWR CCCCCCCCHHHHHHHCCCEEEEEEEEECCCCCEEEEEEECCCCCCEEEEECCCCCCCCEE YSVSLPLYEGQPTRRYCFKLLWDDHQQWFGPLGFSVILPAQLAQFAVDVPDSGPDWVADQ EEEEEEEECCCCHHHHHHHHHHHCHHHHHCCCCHHEEEHHHHHHHEEECCCCCCCHHHHH VFYQIFPDRFASSQADHGVQEGSYIHHAAGCPVSRREWQQPLDDVHAASTFYGGDLAGIS HHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCHHHHHCCHHHHHHHHHCCCCCHHHHH QKIPYFQQLGVTALYLNPIFTAPSVHKYDTEDYYQVDPYLGGERDFLQLRAATREVGIKL HCCCHHHHCCCEEEEECCCCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHCCEEE VLDGVFNHTGDSHRWFDRYQQGENGACHHEDSPYRGWFTFLPDGRALDWKGNASLPKLNF EEEHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCEECCCCCCCCCCCCC ANEEVAERIYRSDDSVVRYWLRPPYSIDGWRLDVVHMLGEDGGAKGNLHHLHGIYQAAKE CCHHHHHHHHCCCCCEEEEECCCCCCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHC ENPQAYILGEHFGDARNWLHAGVEDAAMNYMGFALPVRSFLAELDVACHPIKLDAADCAY CCCCEEEEECCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHH WMDEYRAGLPHSQQLRLFNQLDSHDTARFLTLLKGDKTRMQMALIWLFSWIGVPCLFYGD HHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCEEEECC EIGLDGGNDPFCRKPFPWDEAQWDHDLLSLCQRMAALRHKSIALRRGGCQVIHASGDSLV EECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEEECCCEEEEEECCCCEE FIRSYQTERVMVAIQRSDDADIFLPASPLLNVAEWQRLEGGANLAVSETGVNMGLEGKSV EEEECCCCEEEEEEECCCCCCEEECCHHHCCHHHHHHHCCCCCEEEEECCCCCCCCCCEE TLWCGVGEC EEEEECCCC >Mature Secondary Structure MLSGWHLPVSPFVRLADDALHITLWLQGDSLPAQVFLRCEPDNEEWLLTMEGHESHDRWR CCCCCCCCHHHHHHHCCCEEEEEEEEECCCCCEEEEEEECCCCCCEEEEECCCCCCCCEE YSVSLPLYEGQPTRRYCFKLLWDDHQQWFGPLGFSVILPAQLAQFAVDVPDSGPDWVADQ EEEEEEEECCCCHHHHHHHHHHHCHHHHHCCCCHHEEEHHHHHHHEEECCCCCCCHHHHH VFYQIFPDRFASSQADHGVQEGSYIHHAAGCPVSRREWQQPLDDVHAASTFYGGDLAGIS HHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCHHHHHCCHHHHHHHHHCCCCCHHHHH QKIPYFQQLGVTALYLNPIFTAPSVHKYDTEDYYQVDPYLGGERDFLQLRAATREVGIKL HCCCHHHHCCCEEEEECCCCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHCCEEE VLDGVFNHTGDSHRWFDRYQQGENGACHHEDSPYRGWFTFLPDGRALDWKGNASLPKLNF EEEHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCEECCCCCCCCCCCCC ANEEVAERIYRSDDSVVRYWLRPPYSIDGWRLDVVHMLGEDGGAKGNLHHLHGIYQAAKE CCHHHHHHHHCCCCCEEEEECCCCCCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHC ENPQAYILGEHFGDARNWLHAGVEDAAMNYMGFALPVRSFLAELDVACHPIKLDAADCAY CCCCEEEEECCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHH WMDEYRAGLPHSQQLRLFNQLDSHDTARFLTLLKGDKTRMQMALIWLFSWIGVPCLFYGD HHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCEEEECC EIGLDGGNDPFCRKPFPWDEAQWDHDLLSLCQRMAALRHKSIALRRGGCQVIHASGDSLV EECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEEECCCEEEEEECCCCEE FIRSYQTERVMVAIQRSDDADIFLPASPLLNVAEWQRLEGGANLAVSETGVNMGLEGKSV EEEECCCCEEEEEEECCCCCCEEECCHHHCCHHHHHHHCCCCCEEEEECCCCCCCCCCEE TLWCGVGEC EEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1918057; 9278503; 1706703 [H]