| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is glgP [H]
Identifier: 153948760
GI number: 153948760
Start: 4490410
End: 4492857
Strand: Reverse
Name: glgP [H]
Synonym: YpsIP31758_4002
Alternate gene names: 153948760
Gene position: 4492857-4490410 (Counterclockwise)
Preceding gene: 153947505
Following gene: 153948329
Centisome position: 95.12
GC content: 47.96
Gene sequence:
>2448_bases ATGACATCACCGTTTAGCTATACCTCACCCGTTGTCAGTGTGGATGCACTGAAACACTCTATTGCCTATAAGCTAATGTT TATTGTTGGCAAAGATCCCACCATTGCGACGCAACATGATTGGTTGAATGCGACTCTATTTGCGGTACGTGATCGCATGG TTGAACGTTGGTTACGTTCTAACCGCGCTCAATTATCACAGGACGTTCGGCAGGTTTATTATCTATCGATGGAGTTTTTA CTGGGTAGAACATTATCTAACGCGCTGTTATCGATGGGGATTTATGATGAGATCGAGCAGGCGCTGGATGAAATGGGCCT CAGTTTGTCAGAGTTACTGGAGGAGGAGAACGATCCCGGTTTAGGTAATGGTGGTTTAGGCCGTCTGGCGGCGTGTTTCC TCGATTCATTGGCCACCCTCGCGCTACCGGGGCGGGGCTACGGCATTCGTTATGAATATGGCATGTTCAGCCAGAAAATT GTTAACGGCCAACAGATGGAGTCGCCGGATAACTGGTTGGAATATGGCAATGCATGGGAGTTTCCACGGCACAACACCCG CTATAAAGTCCGGTTCGGTGGCCGTATTCAGCAAGAAGGCAGCAAGATTCGCTGGTTAGAAACCGAAGAAATCCTCGCGT GTGCGTATGATCAAATTATTCCTGGTTTTGATACTGATGCCACCAATACATTGCGCTTATGGTCTGCGCAGGCCAGTAAT GAAATTAATCTGGGCAAATTTAATCAAGGCGATTACTTCGCCGCAGTTGAAGATAAAAACCATTCAGAGAACGTCTCACG AGTCCTATACCCCGATGATTCCACCTATTCCGGGCGTGAATTACGCTTGCGGCAAGAGTACTTTTTAGTCTCAGCGACGG TGCAGGATATTCTGAGCCGCCATTGGGCGATGCATCAGACATTCAATAACTTAGCCGATAAAATTGCTATTCATCTGAAT GATACGCACCCGGTGCTTTCCATTCCTGAAATGATGCGTTTACTGATCGACGAGCATAAATTTACCTGGATGGACGCATG GGATGTGGTGCAGCAAGTGTTTTCCTACACCAACCATACGTTGATGAGTGAGGCGCTGGAGACCTGGCCTGTCGATATGA TCGGTAAGATTTTGCCACGCCATCTGCAAATCATCTTTGATATCAATGATCATTTCCTCAAGCTGGTGGAGGAACAATAT CCTGACGACAAAGAGCTGCTCTCAAGAGTATCGGTCATTGACGAGAACAACGGCCGACGGATACGCATGGCCTGGCTGGC GGTGATTGCCAGCCACAAAGTGAACGGCGTTTCTGCGTTACATTCTGAGCTGATGGTGCAATCGTTGTTTGCTGATTTTG CCCGTATCTTCCCTAATCGCTTCTGCAATAAAACCAATGGTGTGACACCACGGCGCTGGTTGGGGTTAGCCAACCGGCCT TTGGCGGCAGTGTTGGATGGCAGTATTGGCCAGACCTGGCGTACTGACCTGAGCCAACTTAGCGAGCTGGAAAAGAACCT TGATTACCCCAGTTTCTTACTGGCCTTACAAAAGGCCAAGCTGGAAAACAAAAAACGGCTGGCGGGTTATATCGCTGAAA AACTCAATATCGTGGTCAATCCGGCAGCGTTGTTTGACGTACAAATTAAACGTATTCACGAGTACAAGCGGCAATTGCTG AATGTGTTACATGTGATAACGCGTTATAACCGCATTATTGACGCGCCTGACGATAACTGGGTGCCGCGGGTGGTGATTTT TGCCGGTAAAGCCGCCTCGGCTTATTATAATGCCAAGCAAATTATTCACCTGATCAACGACGTAGCGAAGGTTATCAACA ACGATCCACGGATCAATAATTTATTGAAAGTGGTCTTTATTCCTAACTACAGTGTGAGCTTGGCGCAGTTGATCATTCCG GCGGCCGACTTGTCCGAACAGATCTCGTTGGCGGGTACAGAAGCGTCGGGGACCAGTAATATGAAGTTTGCGCTAAACGG AGCGCTAACCATTGGTACATTAGACGGTGCTAATGTGGAGATCCGCGAGCATGTCGGTGAAGAGAATATATTTATCTTCG GGAATACGACTGAGCAGGTTGAAGCATTGCGTAAGAGTGGCTATAACCCACGGAAATATTACGACGAGGACCCTGAGTTA CATCAGGTACTGACACAGATAGCGACAGGCACGTTCAGCCCAGAAGAGCCTCATCGCTATACCAACCTGTTTGATTCGCT GGTCAATTTGGGGGATCACTACCAGCTATTGGCGGATTATCGCAGCTATGTGGACACTCAAGAGCAAGTCGATGCGCTGT ATCGCAACCGGGATGAATGGTCGCGTAAAACCTTACTGAATATTGCCAATATGGGTTATTTCTCTTCAGACCGGACGATT AAGGAGTATGCCGATGAGATTTGGCATATTAAGCCTATCCGGCTGTAG
Upstream 100 bases:
>100_bases TGAAACTGATAATCGTTGAAACTGGTAATCGTTAGCGCTCGTCATTGTTGGCGCTCGTCATTGTCGACTCGTTGTAGCCA TTAAACTTGGGAAAAACGTT
Downstream 100 bases:
>100_bases TGTGCGGTAATGGCATATTCAACCGCCAGTGCCACCGTAAAAAACCCTCTTCGCGGTTATCCGATGAAGAGGGTTTTTAA ATTTCTTGAGATGCTTGAAC
Product: glycogen phosphorylase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 815; Mature: 814
Protein sequence:
>815_residues MTSPFSYTSPVVSVDALKHSIAYKLMFIVGKDPTIATQHDWLNATLFAVRDRMVERWLRSNRAQLSQDVRQVYYLSMEFL LGRTLSNALLSMGIYDEIEQALDEMGLSLSELLEEENDPGLGNGGLGRLAACFLDSLATLALPGRGYGIRYEYGMFSQKI VNGQQMESPDNWLEYGNAWEFPRHNTRYKVRFGGRIQQEGSKIRWLETEEILACAYDQIIPGFDTDATNTLRLWSAQASN EINLGKFNQGDYFAAVEDKNHSENVSRVLYPDDSTYSGRELRLRQEYFLVSATVQDILSRHWAMHQTFNNLADKIAIHLN DTHPVLSIPEMMRLLIDEHKFTWMDAWDVVQQVFSYTNHTLMSEALETWPVDMIGKILPRHLQIIFDINDHFLKLVEEQY PDDKELLSRVSVIDENNGRRIRMAWLAVIASHKVNGVSALHSELMVQSLFADFARIFPNRFCNKTNGVTPRRWLGLANRP LAAVLDGSIGQTWRTDLSQLSELEKNLDYPSFLLALQKAKLENKKRLAGYIAEKLNIVVNPAALFDVQIKRIHEYKRQLL NVLHVITRYNRIIDAPDDNWVPRVVIFAGKAASAYYNAKQIIHLINDVAKVINNDPRINNLLKVVFIPNYSVSLAQLIIP AADLSEQISLAGTEASGTSNMKFALNGALTIGTLDGANVEIREHVGEENIFIFGNTTEQVEALRKSGYNPRKYYDEDPEL HQVLTQIATGTFSPEEPHRYTNLFDSLVNLGDHYQLLADYRSYVDTQEQVDALYRNRDEWSRKTLLNIANMGYFSSDRTI KEYADEIWHIKPIRL
Sequences:
>Translated_815_residues MTSPFSYTSPVVSVDALKHSIAYKLMFIVGKDPTIATQHDWLNATLFAVRDRMVERWLRSNRAQLSQDVRQVYYLSMEFL LGRTLSNALLSMGIYDEIEQALDEMGLSLSELLEEENDPGLGNGGLGRLAACFLDSLATLALPGRGYGIRYEYGMFSQKI VNGQQMESPDNWLEYGNAWEFPRHNTRYKVRFGGRIQQEGSKIRWLETEEILACAYDQIIPGFDTDATNTLRLWSAQASN EINLGKFNQGDYFAAVEDKNHSENVSRVLYPDDSTYSGRELRLRQEYFLVSATVQDILSRHWAMHQTFNNLADKIAIHLN DTHPVLSIPEMMRLLIDEHKFTWMDAWDVVQQVFSYTNHTLMSEALETWPVDMIGKILPRHLQIIFDINDHFLKLVEEQY PDDKELLSRVSVIDENNGRRIRMAWLAVIASHKVNGVSALHSELMVQSLFADFARIFPNRFCNKTNGVTPRRWLGLANRP LAAVLDGSIGQTWRTDLSQLSELEKNLDYPSFLLALQKAKLENKKRLAGYIAEKLNIVVNPAALFDVQIKRIHEYKRQLL NVLHVITRYNRIIDAPDDNWVPRVVIFAGKAASAYYNAKQIIHLINDVAKVINNDPRINNLLKVVFIPNYSVSLAQLIIP AADLSEQISLAGTEASGTSNMKFALNGALTIGTLDGANVEIREHVGEENIFIFGNTTEQVEALRKSGYNPRKYYDEDPEL HQVLTQIATGTFSPEEPHRYTNLFDSLVNLGDHYQLLADYRSYVDTQEQVDALYRNRDEWSRKTLLNIANMGYFSSDRTI KEYADEIWHIKPIRL >Mature_814_residues TSPFSYTSPVVSVDALKHSIAYKLMFIVGKDPTIATQHDWLNATLFAVRDRMVERWLRSNRAQLSQDVRQVYYLSMEFLL GRTLSNALLSMGIYDEIEQALDEMGLSLSELLEEENDPGLGNGGLGRLAACFLDSLATLALPGRGYGIRYEYGMFSQKIV NGQQMESPDNWLEYGNAWEFPRHNTRYKVRFGGRIQQEGSKIRWLETEEILACAYDQIIPGFDTDATNTLRLWSAQASNE INLGKFNQGDYFAAVEDKNHSENVSRVLYPDDSTYSGRELRLRQEYFLVSATVQDILSRHWAMHQTFNNLADKIAIHLND THPVLSIPEMMRLLIDEHKFTWMDAWDVVQQVFSYTNHTLMSEALETWPVDMIGKILPRHLQIIFDINDHFLKLVEEQYP DDKELLSRVSVIDENNGRRIRMAWLAVIASHKVNGVSALHSELMVQSLFADFARIFPNRFCNKTNGVTPRRWLGLANRPL AAVLDGSIGQTWRTDLSQLSELEKNLDYPSFLLALQKAKLENKKRLAGYIAEKLNIVVNPAALFDVQIKRIHEYKRQLLN VLHVITRYNRIIDAPDDNWVPRVVIFAGKAASAYYNAKQIIHLINDVAKVINNDPRINNLLKVVFIPNYSVSLAQLIIPA ADLSEQISLAGTEASGTSNMKFALNGALTIGTLDGANVEIREHVGEENIFIFGNTTEQVEALRKSGYNPRKYYDEDPELH QVLTQIATGTFSPEEPHRYTNLFDSLVNLGDHYQLLADYRSYVDTQEQVDALYRNRDEWSRKTLLNIANMGYFSSDRTIK EYADEIWHIKPIRL
Specific function: Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties [
COG id: COG0058
COG function: function code G; Glucan phosphorylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycogen phosphorylase family [H]
Homologues:
Organism=Homo sapiens, GI21361370, Length=807, Percent_Identity=50.9293680297398, Blast_Score=810, Evalue=0.0, Organism=Homo sapiens, GI5032009, Length=815, Percent_Identity=49.6932515337423, Blast_Score=801, Evalue=0.0, Organism=Homo sapiens, GI71037379, Length=813, Percent_Identity=50.1845018450184, Blast_Score=799, Evalue=0.0, Organism=Homo sapiens, GI255653002, Length=813, Percent_Identity=48.8314883148831, Blast_Score=750, Evalue=0.0, Organism=Homo sapiens, GI257900462, Length=668, Percent_Identity=50.1497005988024, Blast_Score=692, Evalue=0.0, Organism=Escherichia coli, GI2367228, Length=815, Percent_Identity=79.3865030674847, Blast_Score=1353, Evalue=0.0, Organism=Escherichia coli, GI48994936, Length=768, Percent_Identity=47.1354166666667, Blast_Score=728, Evalue=0.0, Organism=Caenorhabditis elegans, GI17564550, Length=811, Percent_Identity=49.9383477188656, Blast_Score=821, Evalue=0.0, Organism=Caenorhabditis elegans, GI32566204, Length=813, Percent_Identity=49.8154981549816, Blast_Score=821, Evalue=0.0, Organism=Saccharomyces cerevisiae, GI6325418, Length=812, Percent_Identity=47.1674876847291, Blast_Score=722, Evalue=0.0, Organism=Drosophila melanogaster, GI78706832, Length=810, Percent_Identity=50.6172839506173, Blast_Score=823, Evalue=0.0, Organism=Drosophila melanogaster, GI24581010, Length=810, Percent_Identity=50.6172839506173, Blast_Score=823, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011833 - InterPro: IPR000811 [H]
Pfam domain/function: PF00343 Phosphorylase [H]
EC number: =2.4.1.1 [H]
Molecular weight: Translated: 93232; Mature: 93101
Theoretical pI: Translated: 5.80; Mature: 5.80
Prosite motif: PS00102 PHOSPHORYLASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSPFSYTSPVVSVDALKHSIAYKLMFIVGKDPTIATQHDWLNATLFAVRDRMVERWLRS CCCCCCCCCCHHHHHHHHHHHHEEEEEEECCCCCEEECCCHHHHHHHHHHHHHHHHHHHH NRAQLSQDVRQVYYLSMEFLLGRTLSNALLSMGIYDEIEQALDEMGLSLSELLEEENDPG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHCCCCCC LGNGGLGRLAACFLDSLATLALPGRGYGIRYEYGMFSQKIVNGQQMESPDNWLEYGNAWE CCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCHHHHHCCCCCCCCCHHHHHCCCCCC FPRHNTRYKVRFGGRIQQEGSKIRWLETEEILACAYDQIIPGFDTDATNTLRLWSAQASN CCCCCCEEEEEECCEECCCCCEEEEECHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCC EINLGKFNQGDYFAAVEDKNHSENVSRVLYPDDSTYSGRELRLRQEYFLVSATVQDILSR CCCCCCCCCCCEEEEECCCCCCCCCCEEECCCCCCCCCCCEEEHHHHHHHHHHHHHHHHH HWAMHQTFNNLADKIAIHLNDTHPVLSIPEMMRLLIDEHKFTWMDAWDVVQQVFSYTNHT HHHHHHHHHHHHHEEEEEECCCCCCCCHHHHHHHHHHCCCCEEECHHHHHHHHHHHHHHH LMSEALETWPVDMIGKILPRHLQIIFDINDHFLKLVEEQYPDDKELLSRVSVIDENNGRR HHHHHHHHCCHHHHHHHHHHHEEEEEECCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCE IRMAWLAVIASHKVNGVSALHSELMVQSLFADFARIFPNRFCNKTNGVTPRRWLGLANRP EHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCC LAAVLDGSIGQTWRTDLSQLSELEKNLDYPSFLLALQKAKLENKKRLAGYIAEKLNIVVN HHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEC PAALFDVQIKRIHEYKRQLLNVLHVITRYNRIIDAPDDNWVPRVVIFAGKAASAYYNAKQ CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCHHHHHHHHHH IIHLINDVAKVINNDPRINNLLKVVFIPNYSVSLAQLIIPAADLSEQISLAGTEASGTSN HHHHHHHHHHHHCCCCCCCCEEEEEEECCCCHHHHHHHHCHHHHHHHHHCCCCCCCCCCC MKFALNGALTIGTLDGANVEIREHVGEENIFIFGNTTEQVEALRKSGYNPRKYYDEDPEL EEEEEECEEEEEECCCCCCHHHHHCCCCCEEEECCCHHHHHHHHHCCCCCCCCCCCCHHH HQVLTQIATGTFSPEEPHRYTNLFDSLVNLGDHYQLLADYRSYVDTQEQVDALYRNRDEW HHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHCHHHH SRKTLLNIANMGYFSSDRTIKEYADEIWHIKPIRL HHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCC >Mature Secondary Structure TSPFSYTSPVVSVDALKHSIAYKLMFIVGKDPTIATQHDWLNATLFAVRDRMVERWLRS CCCCCCCCCHHHHHHHHHHHHEEEEEEECCCCCEEECCCHHHHHHHHHHHHHHHHHHHH NRAQLSQDVRQVYYLSMEFLLGRTLSNALLSMGIYDEIEQALDEMGLSLSELLEEENDPG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHCCCCCC LGNGGLGRLAACFLDSLATLALPGRGYGIRYEYGMFSQKIVNGQQMESPDNWLEYGNAWE CCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCHHHHHCCCCCCCCCHHHHHCCCCCC FPRHNTRYKVRFGGRIQQEGSKIRWLETEEILACAYDQIIPGFDTDATNTLRLWSAQASN CCCCCCEEEEEECCEECCCCCEEEEECHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCC EINLGKFNQGDYFAAVEDKNHSENVSRVLYPDDSTYSGRELRLRQEYFLVSATVQDILSR CCCCCCCCCCCEEEEECCCCCCCCCCEEECCCCCCCCCCCEEEHHHHHHHHHHHHHHHHH HWAMHQTFNNLADKIAIHLNDTHPVLSIPEMMRLLIDEHKFTWMDAWDVVQQVFSYTNHT HHHHHHHHHHHHHEEEEEECCCCCCCCHHHHHHHHHHCCCCEEECHHHHHHHHHHHHHHH LMSEALETWPVDMIGKILPRHLQIIFDINDHFLKLVEEQYPDDKELLSRVSVIDENNGRR HHHHHHHHCCHHHHHHHHHHHEEEEEECCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCE IRMAWLAVIASHKVNGVSALHSELMVQSLFADFARIFPNRFCNKTNGVTPRRWLGLANRP EHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCC LAAVLDGSIGQTWRTDLSQLSELEKNLDYPSFLLALQKAKLENKKRLAGYIAEKLNIVVN HHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEC PAALFDVQIKRIHEYKRQLLNVLHVITRYNRIIDAPDDNWVPRVVIFAGKAASAYYNAKQ CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCHHHHHHHHHH IIHLINDVAKVINNDPRINNLLKVVFIPNYSVSLAQLIIPAADLSEQISLAGTEASGTSN HHHHHHHHHHHHCCCCCCCCEEEEEEECCCCHHHHHHHHCHHHHHHHHHCCCCCCCCCCC MKFALNGALTIGTLDGANVEIREHVGEENIFIFGNTTEQVEALRKSGYNPRKYYDEDPEL EEEEEECEEEEEECCCCCCHHHHHCCCCCEEEECCCHHHHHHHHHCCCCCCCCCCCCHHH HQVLTQIATGTFSPEEPHRYTNLFDSLVNLGDHYQLLADYRSYVDTQEQVDALYRNRDEW HHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHCHHHH SRKTLLNIANMGYFSSDRTIKEYADEIWHIKPIRL HHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2645169; 3047129; 9278503; 2975249; 3097003 [H]