| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is 153948715
Identifier: 153948715
GI number: 153948715
Start: 706763
End: 707584
Strand: Reverse
Name: 153948715
Synonym: YpsIP31758_0602
Alternate gene names: NA
Gene position: 707584-706763 (Counterclockwise)
Preceding gene: 153949206
Following gene: 153948843
Centisome position: 14.98
GC content: 34.55
Gene sequence:
>822_bases ATGAATCGAAAATTTCTTATATTATTTTCACTCCTGATTGTTGCCATCGGAATCTCCGGTATTCTGTTAAATCCTGATAA GGAGATACCTGAATTACTGGCTCAGACAGAGAAAAGAAAAGAGAAAAACATTGTATTAGCCCAAACACGCCATGACCTTA GCGCCGGTGCTTTAGTCTCCAGACAAGATTATTCATTACAGAATATCACTGTAGATGAATCGAGCGGTCTGGTTAAAAAT GATCTATCACATGGTCATAGAATTGATGGTCATTTATTAAAAAACAATATTTTAGCGGGTTCATATATTACCGATGAAAT GTTAATCTCGCCCAATAGCCATGAATTTTCCCAGTTAAATTTAAAAAACGGAGAGATAATTTATAAATTTTTTATTACGA AAAAAAATGAATACTTACTGAACACCTTAAATCCGGGTGACTTTCTTTCATTCCAATTGCTGACACTTGAAACGAATAAA GCAAAAGGAATGGAAAATGGTATTGCTATTGATAGCAATAGTATGAATAGCAAGCAAAGGCAAAAGTACTCACTTAATAA CGTGATACCTAACATGCCGATATTAAGCATTAAAACGTATTCATCTGAAGAGATATCAGTAAAAAACAACAAAAACAATA AGACTGAAGAGTATTCCCTGGGTTATATTGAAGTGATAATGAAAATACAAGACCTCGAATTTATCCATACGGTGGAGAAA GCCGGTGAGGTGTTTTTAACCCCCAAGAGTGGCGATCACAAACGAATAGATTTGGATGAAATTATCCCTACATTACAGAC AATAAGAGAGCTAAGAGGATGA
Upstream 100 bases:
>100_bases CTACGCCATTGCTATCACTGCTGGATTTCTATTATCTGTATTAATTTAAATGGCTGAAATAAATTGATTTATCACGATAG CATGACAAAAGGTACGAATA
Downstream 100 bases:
>100_bases ATCGACATCAACTAAAAGATAAAAAACAAAATATAATTATATTCTCGGTTATCTTTATTCTCTACTTTTTGTTTGAAAAC ACAGCTACTGCCAAGCAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: Tight Adherance Operon Protein
Number of amino acids: Translated: 273; Mature: 273
Protein sequence:
>273_residues MNRKFLILFSLLIVAIGISGILLNPDKEIPELLAQTEKRKEKNIVLAQTRHDLSAGALVSRQDYSLQNITVDESSGLVKN DLSHGHRIDGHLLKNNILAGSYITDEMLISPNSHEFSQLNLKNGEIIYKFFITKKNEYLLNTLNPGDFLSFQLLTLETNK AKGMENGIAIDSNSMNSKQRQKYSLNNVIPNMPILSIKTYSSEEISVKNNKNNKTEEYSLGYIEVIMKIQDLEFIHTVEK AGEVFLTPKSGDHKRIDLDEIIPTLQTIRELRG
Sequences:
>Translated_273_residues MNRKFLILFSLLIVAIGISGILLNPDKEIPELLAQTEKRKEKNIVLAQTRHDLSAGALVSRQDYSLQNITVDESSGLVKN DLSHGHRIDGHLLKNNILAGSYITDEMLISPNSHEFSQLNLKNGEIIYKFFITKKNEYLLNTLNPGDFLSFQLLTLETNK AKGMENGIAIDSNSMNSKQRQKYSLNNVIPNMPILSIKTYSSEEISVKNNKNNKTEEYSLGYIEVIMKIQDLEFIHTVEK AGEVFLTPKSGDHKRIDLDEIIPTLQTIRELRG >Mature_273_residues MNRKFLILFSLLIVAIGISGILLNPDKEIPELLAQTEKRKEKNIVLAQTRHDLSAGALVSRQDYSLQNITVDESSGLVKN DLSHGHRIDGHLLKNNILAGSYITDEMLISPNSHEFSQLNLKNGEIIYKFFITKKNEYLLNTLNPGDFLSFQLLTLETNK AKGMENGIAIDSNSMNSKQRQKYSLNNVIPNMPILSIKTYSSEEISVKNNKNNKTEEYSLGYIEVIMKIQDLEFIHTVEK AGEVFLTPKSGDHKRIDLDEIIPTLQTIRELRG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30901; Mature: 30901
Theoretical pI: Translated: 6.90; Mature: 6.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRKFLILFSLLIVAIGISGILLNPDKEIPELLAQTEKRKEKNIVLAQTRHDLSAGALVS CCCEEHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHCCEEEEECCCCCCCCEEEE RQDYSLQNITVDESSGLVKNDLSHGHRIDGHLLKNNILAGSYITDEMLISPNSHEFSQLN CCCCCEEEEEEECCCCCHHHHHCCCCCCCCEEEECCEEECCEECCCEEECCCCCCCEEEE LKNGEIIYKFFITKKNEYLLNTLNPGDFLSFQLLTLETNKAKGMENGIAIDSNSMNSKQR CCCCCEEEEEEEECCCCEEEEECCCCCEEEEEEEEEECCCCCCCCCCEEEECCCCCHHHH QKYSLNNVIPNMPILSIKTYSSEEISVKNNKNNKTEEYSLGYIEVIMKIQDLEFIHTVEK HHHHHHHCCCCCCEEEEEECCCCEEEEECCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHH AGEVFLTPKSGDHKRIDLDEIIPTLQTIRELRG CCCEEEECCCCCCCEECHHHHHHHHHHHHHHCC >Mature Secondary Structure MNRKFLILFSLLIVAIGISGILLNPDKEIPELLAQTEKRKEKNIVLAQTRHDLSAGALVS CCCEEHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHCCEEEEECCCCCCCCEEEE RQDYSLQNITVDESSGLVKNDLSHGHRIDGHLLKNNILAGSYITDEMLISPNSHEFSQLN CCCCCEEEEEEECCCCCHHHHHCCCCCCCCEEEECCEEECCEECCCEEECCCCCCCEEEE LKNGEIIYKFFITKKNEYLLNTLNPGDFLSFQLLTLETNKAKGMENGIAIDSNSMNSKQR CCCCCEEEEEEEECCCCEEEEECCCCCEEEEEEEEEECCCCCCCCCCEEEECCCCCHHHH QKYSLNNVIPNMPILSIKTYSSEEISVKNNKNNKTEEYSLGYIEVIMKIQDLEFIHTVEK HHHHHHHCCCCCCEEEEEECCCCEEEEECCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHH AGEVFLTPKSGDHKRIDLDEIIPTLQTIRELRG CCCEEEECCCCCCCEECHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA