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The map label for this gene is clpS [H]

Identifier: 153948682

GI number: 153948682

Start: 2963088

End: 2963408

Strand: Reverse

Name: clpS [H]

Synonym: YpsIP31758_2607

Alternate gene names: 153948682

Gene position: 2963408-2963088 (Counterclockwise)

Preceding gene: 153950400

Following gene: 153949196

Centisome position: 62.74

GC content: 41.74

Gene sequence:

>321_bases
ATGGGCAAGAACAACGACTGGCTGAATTTTGAACATTTAGTCAAAGATAAACAAATCGAGGCGCTTCAACCGCCTTCGAT
GTATAAAGTGATACTTAACAACGACGATTACACACCGATGGAATTTGTGATTGACGTTCTGCAAAAGTTCTTTTCTTATG
ATATTGAACGTGCAACACAGTTGATGCTCAATGTGCATTATCAAGGAAAGGCGATTTGTGGTGTTTTTACTGCTGAAGTG
GCAGAGACAAAAGTCGCCCATGTAAATCAATACGCCAGGGAGAACGAGCATCCACTGCTTTGTACGCTGGAAAAAGCCTG
A

Upstream 100 bases:

>100_bases
ATAAGTGATGTTAAAATAATGATAGATATCTGTATGAAATGGTCTTATAACCGGAGTGAGGTATTGCTCCTGTGGGGTTC
AGTAAAACGATGGGCAGGCA

Downstream 100 bases:

>100_bases
TTAAGGCAATTATTGGGAGGTGCCTATGCTCAATCAAGAACTTGAACTCAGTCTTAATATGGCTTTCGCCAGAGCGCGTG
AGCACAGACACGAGTTTATG

Product: ATP-dependent Clp protease adaptor protein ClpS

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 106; Mature: 105

Protein sequence:

>106_residues
MGKNNDWLNFEHLVKDKQIEALQPPSMYKVILNNDDYTPMEFVIDVLQKFFSYDIERATQLMLNVHYQGKAICGVFTAEV
AETKVAHVNQYARENEHPLLCTLEKA

Sequences:

>Translated_106_residues
MGKNNDWLNFEHLVKDKQIEALQPPSMYKVILNNDDYTPMEFVIDVLQKFFSYDIERATQLMLNVHYQGKAICGVFTAEV
AETKVAHVNQYARENEHPLLCTLEKA
>Mature_105_residues
GKNNDWLNFEHLVKDKQIEALQPPSMYKVILNNDDYTPMEFVIDVLQKFFSYDIERATQLMLNVHYQGKAICGVFTAEVA
ETKVAHVNQYARENEHPLLCTLEKA

Specific function: Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation [H]

COG id: COG2127

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ClpS family [H]

Homologues:

Organism=Escherichia coli, GI1787108, Length=106, Percent_Identity=84.9056603773585, Blast_Score=192, Evalue=3e-51,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022935
- InterPro:   IPR003769
- InterPro:   IPR014719 [H]

Pfam domain/function: PF02617 ClpS [H]

EC number: NA

Molecular weight: Translated: 12305; Mature: 12174

Theoretical pI: Translated: 5.12; Mature: 5.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKNNDWLNFEHLVKDKQIEALQPPSMYKVILNNDDYTPMEFVIDVLQKFFSYDIERATQ
CCCCCCCCCHHHHHCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHH
LMLNVHYQGKAICGVFTAEVAETKVAHVNQYARENEHPLLCTLEKA
HHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECC
>Mature Secondary Structure 
GKNNDWLNFEHLVKDKQIEALQPPSMYKVILNNDDYTPMEFVIDVLQKFFSYDIERATQ
CCCCCCCCHHHHHCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHH
LMLNVHYQGKAICGVFTAEVAETKVAHVNQYARENEHPLLCTLEKA
HHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA