| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
Click here to switch to the map view.
The map label for this gene is 153948650
Identifier: 153948650
GI number: 153948650
Start: 2807319
End: 2807942
Strand: Direct
Name: 153948650
Synonym: YpsIP31758_2484
Alternate gene names: NA
Gene position: 2807319-2807942 (Clockwise)
Preceding gene: 153950195
Following gene: 153948602
Centisome position: 59.44
GC content: 33.65
Gene sequence:
>624_bases ATGGGCCTTTCATTGAGCTGTATAAGAACCGTAGACGACTATGTAAAACATTTGGATTGTAATCGTGTTTTACCATCCAA AACCTTGGGTAAATTGAAAATCAACAAAAACATTATAAATGCTGAGACCCAACATACTATTAATGACATTAAACAAAAAT TATCCCTTATTCAAGAACGCTATAACGCCTCAACAACAGCTGAGTTTTATTTTGTCGAAAACCAACTAACCGACATGTAT GTGAGTATTAGTCAAAGGAAAGAGGATTTATACGAACCGGAGGACTATTCTTTGAGTGGGGTACAAGAGAGAGAATTGAA AAAAGGAAAAACGGCACAGGATCGTAATAATTTAGTCAAAGATCTGGTTGCGTTATATCAAATAAAAAATGCCATCAAAG AGATGATCCCAGAAAATAAAACTGAAAAAATTGAAAATCACAGGAGGAATCATCAAAAAGTCATTTATAATGGCAAAGTA TTAGATACCTGCCACCCATTTTACTCTTTGGTTGAAGAAAATAAAAAACTCAAATCATATTCTGATTTACACGCAATTGA AAATAACAGAAAGGTCCCTCACGTCATTTACTCTAACGGATGGGATGAGGTTGATTATAAATAA
Upstream 100 bases:
>100_bases ATAAGCAACTTGATTTATTTGAAAGATTGCTTTCTGTGTTTAATCAATAATATCTCGGTAGCAATCAGTCATCATTTATT AAAACCACCAGGAGAGTAAT
Downstream 100 bases:
>100_bases ATAACATGGCATAAACTGTAGTTAACTAATCCGTATTATTCATTGGTGTTAATACAGTTTAAAGGTCGCGCTCCAGCAGG ATCACCCCGCTGTGAGCGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 207; Mature: 206
Protein sequence:
>207_residues MGLSLSCIRTVDDYVKHLDCNRVLPSKTLGKLKINKNIINAETQHTINDIKQKLSLIQERYNASTTAEFYFVENQLTDMY VSISQRKEDLYEPEDYSLSGVQERELKKGKTAQDRNNLVKDLVALYQIKNAIKEMIPENKTEKIENHRRNHQKVIYNGKV LDTCHPFYSLVEENKKLKSYSDLHAIENNRKVPHVIYSNGWDEVDYK
Sequences:
>Translated_207_residues MGLSLSCIRTVDDYVKHLDCNRVLPSKTLGKLKINKNIINAETQHTINDIKQKLSLIQERYNASTTAEFYFVENQLTDMY VSISQRKEDLYEPEDYSLSGVQERELKKGKTAQDRNNLVKDLVALYQIKNAIKEMIPENKTEKIENHRRNHQKVIYNGKV LDTCHPFYSLVEENKKLKSYSDLHAIENNRKVPHVIYSNGWDEVDYK >Mature_206_residues GLSLSCIRTVDDYVKHLDCNRVLPSKTLGKLKINKNIINAETQHTINDIKQKLSLIQERYNASTTAEFYFVENQLTDMYV SISQRKEDLYEPEDYSLSGVQERELKKGKTAQDRNNLVKDLVALYQIKNAIKEMIPENKTEKIENHRRNHQKVIYNGKVL DTCHPFYSLVEENKKLKSYSDLHAIENNRKVPHVIYSNGWDEVDYK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24223; Mature: 24092
Theoretical pI: Translated: 8.41; Mature: 8.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLSLSCIRTVDDYVKHLDCNRVLPSKTLGKLKINKNIINAETQHTINDIKQKLSLIQER CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCHHCCHHHHHHHHHHHHHHHHHHH YNASTTAEFYFVENQLTDMYVSISQRKEDLYEPEDYSLSGVQERELKKGKTAQDRNNLVK HCCCCCEEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHH DLVALYQIKNAIKEMIPENKTEKIENHRRNHQKVIYNGKVLDTCHPFYSLVEENKKLKSY HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCEEEECCEEHHHHHHHHHHHHHHHHHHHH SDLHAIENNRKVPHVIYSNGWDEVDYK HHHHHHHCCCCCCEEEECCCCCCCCCC >Mature Secondary Structure GLSLSCIRTVDDYVKHLDCNRVLPSKTLGKLKINKNIINAETQHTINDIKQKLSLIQER CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCHHCCHHHHHHHHHHHHHHHHHHH YNASTTAEFYFVENQLTDMYVSISQRKEDLYEPEDYSLSGVQERELKKGKTAQDRNNLVK HCCCCCEEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHH DLVALYQIKNAIKEMIPENKTEKIENHRRNHQKVIYNGKVLDTCHPFYSLVEENKKLKSY HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCEEEECCEEHHHHHHHHHHHHHHHHHHHH SDLHAIENNRKVPHVIYSNGWDEVDYK HHHHHHHCCCCCCEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA