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The map label for this gene is yebS [H]

Identifier: 153948601

GI number: 153948601

Start: 1939119

End: 1940366

Strand: Reverse

Name: yebS [H]

Synonym: YpsIP31758_1669

Alternate gene names: 153948601

Gene position: 1940366-1939119 (Counterclockwise)

Preceding gene: 153950000

Following gene: 153946854

Centisome position: 41.08

GC content: 50.8

Gene sequence:

>1248_bases
ATGAAAATACACGCAATTCAACGCCCATTATCCACCGCTCGAGCCCAACGATGCTGCGAGTGCGATGCCCTATTCACCTT
GCCACCATTGGGGGGCAACCAAACAGCCTATTGCCCACGCTGCAACGCCCAAATAACCAGTGGGCGTGACTGGTCGCTGA
CCCGGTTGACCGCCATGGCTTGCGCCATGTTGCTGTTAATACCGTTCGCCTTCACTGAACCCCTGATCAGTATTCGCTTA
CTTGGCACACGTATTGATGCCAGTCTGTTAGCCGGGATTTGGCAAATGAGCCGTCAAGGCGACCCCATCACAGCCAGCAT
GGTGGCATTTTGTGTCCTCGCGGCACCGGTAACCTTAACCTTCTCTATTCTATATCTGCGTATTGGTAGCCGGATTGGCA
TAAATCTGCGCCCGATACTGCTTATATTGGAGCGACTGAAAGAGTGGGTCATGCTGGATATCTATTTAATCGGCATGGCC
GTCGCCTGCATTAAAGTCAAAGAATACGCTGACATCATGCCGGGTACAGGTCTGATAGCCTACCTGGCCTTGACATTACT
GAGTATTCTGACCTTGGTTCATCTGAATCTGGAGCAACTTTGGGAACGGTTTTATCCGCAAGAACAGCCTCCAGGCCCGC
AGGAAACACTGCGCGTTTGCTTATCGTGCCACTACACTGGACACCCCGATAGCCATGGCCGTTGTCCGCGTTGCCATACA
CCTCTCCGACACCGCCGGCGTCATAGCCTACAGAAAACCTGGGCCGCATTGATTGCCGCTATCGTTTTGTTATTGCCCGC
CAACCTCCTCCCAATATCAATCGTTTATGCCAACGGCGCACGGATAGAGGATACCATTTTCTCCGGTGTGGTTTCTTTGG
CGTCATCGGGTAATTTCCCTATTGCTGCCGTGGTCTTCATCGCCAGTGTATTGGTGCCGTTTACTAAAGTGATCGTGTTA
ATCACGTTGCTGCTCAGTATTCACCTAAAGACACAACACAGCCTGAAAACCCGGATGCGTTTGCTGCGGTTGATCACCTG
GATTGGTCGCTGGTCAATGCTGGATCTCTTTGTTATCGCATTAATGATGTCGCTAATTAATCGCGATCAGCTTTTTTCCT
TCACTATGGGGCCAGCAGCCTTCTATTTTGGGTCTGCGGTTATTTTGACTATTCTTGCTGTTGAGTGGCTAGATAGCCGA
TTGATTTGGGATGCATATGCAACAGGAAACACCGAGTACACCGACTGA

Upstream 100 bases:

>100_bases
TTCACCTGTTTCGCCCGATTACGCCATCATGAACCGTGCTATTTTTTACAAAACGATACGATATACTGATGACATCCTAT
GTAGAGCTACCCTCTATCCC

Downstream 100 bases:

>100_bases
GGCTCATGTAAAACATAAACGCCGGTTCTCCCCCTTCTGGCTACTGCCTTTTATTGCGCTACTGATCACGGGCTGGCTGA
TTTATAACAATTGGCAAGAA

Product: PqiA family integral membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 415; Mature: 415

Protein sequence:

>415_residues
MKIHAIQRPLSTARAQRCCECDALFTLPPLGGNQTAYCPRCNAQITSGRDWSLTRLTAMACAMLLLIPFAFTEPLISIRL
LGTRIDASLLAGIWQMSRQGDPITASMVAFCVLAAPVTLTFSILYLRIGSRIGINLRPILLILERLKEWVMLDIYLIGMA
VACIKVKEYADIMPGTGLIAYLALTLLSILTLVHLNLEQLWERFYPQEQPPGPQETLRVCLSCHYTGHPDSHGRCPRCHT
PLRHRRRHSLQKTWAALIAAIVLLLPANLLPISIVYANGARIEDTIFSGVVSLASSGNFPIAAVVFIASVLVPFTKVIVL
ITLLLSIHLKTQHSLKTRMRLLRLITWIGRWSMLDLFVIALMMSLINRDQLFSFTMGPAAFYFGSAVILTILAVEWLDSR
LIWDAYATGNTEYTD

Sequences:

>Translated_415_residues
MKIHAIQRPLSTARAQRCCECDALFTLPPLGGNQTAYCPRCNAQITSGRDWSLTRLTAMACAMLLLIPFAFTEPLISIRL
LGTRIDASLLAGIWQMSRQGDPITASMVAFCVLAAPVTLTFSILYLRIGSRIGINLRPILLILERLKEWVMLDIYLIGMA
VACIKVKEYADIMPGTGLIAYLALTLLSILTLVHLNLEQLWERFYPQEQPPGPQETLRVCLSCHYTGHPDSHGRCPRCHT
PLRHRRRHSLQKTWAALIAAIVLLLPANLLPISIVYANGARIEDTIFSGVVSLASSGNFPIAAVVFIASVLVPFTKVIVL
ITLLLSIHLKTQHSLKTRMRLLRLITWIGRWSMLDLFVIALMMSLINRDQLFSFTMGPAAFYFGSAVILTILAVEWLDSR
LIWDAYATGNTEYTD
>Mature_415_residues
MKIHAIQRPLSTARAQRCCECDALFTLPPLGGNQTAYCPRCNAQITSGRDWSLTRLTAMACAMLLLIPFAFTEPLISIRL
LGTRIDASLLAGIWQMSRQGDPITASMVAFCVLAAPVTLTFSILYLRIGSRIGINLRPILLILERLKEWVMLDIYLIGMA
VACIKVKEYADIMPGTGLIAYLALTLLSILTLVHLNLEQLWERFYPQEQPPGPQETLRVCLSCHYTGHPDSHGRCPRCHT
PLRHRRRHSLQKTWAALIAAIVLLLPANLLPISIVYANGARIEDTIFSGVVSLASSGNFPIAAVVFIASVLVPFTKVIVL
ITLLLSIHLKTQHSLKTRMRLLRLITWIGRWSMLDLFVIALMMSLINRDQLFSFTMGPAAFYFGSAVILTILAVEWLDSR
LIWDAYATGNTEYTD

Specific function: Unknown

COG id: COG2995

COG function: function code S; Uncharacterized paraquat-inducible protein A

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pqiA family [H]

Homologues:

Organism=Escherichia coli, GI1788137, Length=415, Percent_Identity=66.7469879518072, Blast_Score=581, Evalue=1e-167,
Organism=Escherichia coli, GI1787183, Length=406, Percent_Identity=30.7881773399015, Blast_Score=176, Evalue=3e-45,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005219
- InterPro:   IPR011031
- InterPro:   IPR007498 [H]

Pfam domain/function: PF04403 PqiA [H]

EC number: NA

Molecular weight: Translated: 46302; Mature: 46302

Theoretical pI: Translated: 9.03; Mature: 9.03

Prosite motif: PS51008 MULTIHEME_CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIHAIQRPLSTARAQRCCECDALFTLPPLGGNQTAYCPRCNAQITSGRDWSLTRLTAMA
CCCHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCEECCCCCCHHHHHHHHH
CAMLLLIPFAFTEPLISIRLLGTRIDASLLAGIWQMSRQGDPITASMVAFCVLAAPVTLT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
FSILYLRIGSRIGINLRPILLILERLKEWVMLDIYLIGMAVACIKVKEYADIMPGTGLIA
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
YLALTLLSILTLVHLNLEQLWERFYPQEQPPGPQETLRVCLSCHYTGHPDSHGRCPRCHT
HHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCC
PLRHRRRHSLQKTWAALIAAIVLLLPANLLPISIVYANGARIEDTIFSGVVSLASSGNFP
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCC
IAAVVFIASVLVPFTKVIVLITLLLSIHLKTQHSLKTRMRLLRLITWIGRWSMLDLFVIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LMMSLINRDQLFSFTMGPAAFYFGSAVILTILAVEWLDSRLIWDAYATGNTEYTD
HHHHHHCHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCC
>Mature Secondary Structure
MKIHAIQRPLSTARAQRCCECDALFTLPPLGGNQTAYCPRCNAQITSGRDWSLTRLTAMA
CCCHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCEECCCCCCHHHHHHHHH
CAMLLLIPFAFTEPLISIRLLGTRIDASLLAGIWQMSRQGDPITASMVAFCVLAAPVTLT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
FSILYLRIGSRIGINLRPILLILERLKEWVMLDIYLIGMAVACIKVKEYADIMPGTGLIA
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
YLALTLLSILTLVHLNLEQLWERFYPQEQPPGPQETLRVCLSCHYTGHPDSHGRCPRCHT
HHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCC
PLRHRRRHSLQKTWAALIAAIVLLLPANLLPISIVYANGARIEDTIFSGVVSLASSGNFP
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCC
IAAVVFIASVLVPFTKVIVLITLLLSIHLKTQHSLKTRMRLLRLITWIGRWSMLDLFVIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LMMSLINRDQLFSFTMGPAAFYFGSAVILTILAVEWLDSRLIWDAYATGNTEYTD
HHHHHHCHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]