| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is 153948529
Identifier: 153948529
GI number: 153948529
Start: 2532759
End: 2533916
Strand: Reverse
Name: 153948529
Synonym: YpsIP31758_2218
Alternate gene names: NA
Gene position: 2533916-2532759 (Counterclockwise)
Preceding gene: 153947877
Following gene: 153948558
Centisome position: 53.65
GC content: 46.72
Gene sequence:
>1158_bases ATGGCTTATCCGGTTGATAATATTATTCCCGTCAATATTATTCTGACGGCAGCAGGACTCGGGTACGGTGATTTCTCCAG TGCCCTGACGTTTGCTGACCCGTCTGATTTAGCTGAAGGGGTGAAGTTTGGTGCTGATTCATTTCGTGACTATGCATCAC TTCCAGAGCTTGGGGCTGATTTCAAAACAACCAGCCCGATTTATCACATAGCCACCCGCTATTTTGCGCAGATCCCCAAA CCGCCACAAATCACGGTCTGGATGAAGAATACCAAAGATCTGTTGATGGAAATGGTAAACAGCGCAACAGATCGCATTTG GCGCTATCACTACTTTTTCAAAACCAGTGATGTCACCACTAATGAGATTATTCTCCAGTTAGCCGACTGGTCTGATGCCA ATAGCCATCCGGTATGGTGGACATTTAGCGACGTCGATATAGCTGATCAAAACAAAGATAATGATGTCATTTCTCTACTG AAAAGCAAAGGTAATCGGCATGTGTTTGTCGGGTATAAAACGGCTGGATCCGTTACTGCCGACCCGACACAAGCCTATTC AATGGTGCAATTGGCGGCGGCATTCCATAAGTTCAGGCCAACCGGGCTAGATACCGCCATTACTGGTGAGTATCAGGTGT TGCCAGGTGTCATGGGCGATGATATGGCGACCAGCGCCTACAATGCGTTAAAAGCCAAAAATGCGGTCTTTTTTACCAAA ATTGAATTGGCCGGTCAAATTGATAGCAGCCGTGTGATTAACAGTAAGTCGATGTCGTCCTACGGTGAATTTATCGATGA TGTGCTCAATCTGGATGTGTTGAAAAATCATATTCAGGTGGACGGTTACAACTACATTGCCAATGTTGGCACCAAACGGG CACTAACCCCACGGGACTACGACGGGTTACTGTCTACAGTCGCTACCACTTGTAAGCGTTTTTTCGATAATGGCGTGTTG GGTACTGGCTCCTATATTGATCCGGAAGATGGTGTGACTAAAGTGGCTGATTTTGGTTTTGTCATCCGGTCACGTCCTGA GGATGTGCTTTCACTGACGGCGGACCAACGCAAAAAACGTGTTTACCCGTTAACCACCTTGTTAGTGATTTTAGGCCGTG CGGGTCATGTTGCTGAAATCAATGCTACCGTGGAGTGA
Upstream 100 bases:
>100_bases TATCAGGCTGATATCCATCTATTCATTGAGAAAACCGTATCCTACGCGCTGTTACGCGCCGCAGGGTTTGACATTCAAAT TAGAGAAAGAGACGGTACTT
Downstream 100 bases:
>100_bases TCCTTTATGACAATGCACAGATACGGCGCTGACGGTTCTAATCTAACGGTCTTCGGGATCCCTATTGATGACTTTGGTGA TACCGATCCACCCATTACCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 385; Mature: 384
Protein sequence:
>385_residues MAYPVDNIIPVNIILTAAGLGYGDFSSALTFADPSDLAEGVKFGADSFRDYASLPELGADFKTTSPIYHIATRYFAQIPK PPQITVWMKNTKDLLMEMVNSATDRIWRYHYFFKTSDVTTNEIILQLADWSDANSHPVWWTFSDVDIADQNKDNDVISLL KSKGNRHVFVGYKTAGSVTADPTQAYSMVQLAAAFHKFRPTGLDTAITGEYQVLPGVMGDDMATSAYNALKAKNAVFFTK IELAGQIDSSRVINSKSMSSYGEFIDDVLNLDVLKNHIQVDGYNYIANVGTKRALTPRDYDGLLSTVATTCKRFFDNGVL GTGSYIDPEDGVTKVADFGFVIRSRPEDVLSLTADQRKKRVYPLTTLLVILGRAGHVAEINATVE
Sequences:
>Translated_385_residues MAYPVDNIIPVNIILTAAGLGYGDFSSALTFADPSDLAEGVKFGADSFRDYASLPELGADFKTTSPIYHIATRYFAQIPK PPQITVWMKNTKDLLMEMVNSATDRIWRYHYFFKTSDVTTNEIILQLADWSDANSHPVWWTFSDVDIADQNKDNDVISLL KSKGNRHVFVGYKTAGSVTADPTQAYSMVQLAAAFHKFRPTGLDTAITGEYQVLPGVMGDDMATSAYNALKAKNAVFFTK IELAGQIDSSRVINSKSMSSYGEFIDDVLNLDVLKNHIQVDGYNYIANVGTKRALTPRDYDGLLSTVATTCKRFFDNGVL GTGSYIDPEDGVTKVADFGFVIRSRPEDVLSLTADQRKKRVYPLTTLLVILGRAGHVAEINATVE >Mature_384_residues AYPVDNIIPVNIILTAAGLGYGDFSSALTFADPSDLAEGVKFGADSFRDYASLPELGADFKTTSPIYHIATRYFAQIPKP PQITVWMKNTKDLLMEMVNSATDRIWRYHYFFKTSDVTTNEIILQLADWSDANSHPVWWTFSDVDIADQNKDNDVISLLK SKGNRHVFVGYKTAGSVTADPTQAYSMVQLAAAFHKFRPTGLDTAITGEYQVLPGVMGDDMATSAYNALKAKNAVFFTKI ELAGQIDSSRVINSKSMSSYGEFIDDVLNLDVLKNHIQVDGYNYIANVGTKRALTPRDYDGLLSTVATTCKRFFDNGVLG TGSYIDPEDGVTKVADFGFVIRSRPEDVLSLTADQRKKRVYPLTTLLVILGRAGHVAEINATVE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42456; Mature: 42325
Theoretical pI: Translated: 5.22; Mature: 5.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAYPVDNIIPVNIILTAAGLGYGDFSSALTFADPSDLAEGVKFGADSFRDYASLPELGAD CCCCCCCEEEEEEEEEECCCCCCCHHCCEECCCHHHHHHHHHHCHHHHHHHHCCHHHCCC FKTTSPIYHIATRYFAQIPKPPQITVWMKNTKDLLMEMVNSATDRIWRYHYFFKTSDVTT CCCCCHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHEEEEEEEEECCCCH NEIILQLADWSDANSHPVWWTFSDVDIADQNKDNDVISLLKSKGNRHVFVGYKTAGSVTA HHEEEEEECCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHCCCCEEEEEEEECCCCCCC DPTQAYSMVQLAAAFHKFRPTGLDTAITGEYQVLPGVMGDDMATSAYNALKAKNAVFFTK CHHHHHHHHHHHHHHHHCCCCCCCEEECCCEEECCCCCCCCHHHHHHHHHHHCCCEEEEE IELAGQIDSSRVINSKSMSSYGEFIDDVLNLDVLKNHIQVDGYNYIANVGTKRALTPRDY EEEECCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHEEECCCCEEECCCCCCCCCCCCH DGLLSTVATTCKRFFDNGVLGTGSYIDPEDGVTKVADFGFVIRSRPEDVLSLTADQRKKR HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHCHHHHHCC VYPLTTLLVILGRAGHVAEINATVE CCHHHHHHHHHCCCCCEEEEEEECC >Mature Secondary Structure AYPVDNIIPVNIILTAAGLGYGDFSSALTFADPSDLAEGVKFGADSFRDYASLPELGAD CCCCCCEEEEEEEEEECCCCCCCHHCCEECCCHHHHHHHHHHCHHHHHHHHCCHHHCCC FKTTSPIYHIATRYFAQIPKPPQITVWMKNTKDLLMEMVNSATDRIWRYHYFFKTSDVTT CCCCCHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHEEEEEEEEECCCCH NEIILQLADWSDANSHPVWWTFSDVDIADQNKDNDVISLLKSKGNRHVFVGYKTAGSVTA HHEEEEEECCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHCCCCEEEEEEEECCCCCCC DPTQAYSMVQLAAAFHKFRPTGLDTAITGEYQVLPGVMGDDMATSAYNALKAKNAVFFTK CHHHHHHHHHHHHHHHHCCCCCCCEEECCCEEECCCCCCCCHHHHHHHHHHHCCCEEEEE IELAGQIDSSRVINSKSMSSYGEFIDDVLNLDVLKNHIQVDGYNYIANVGTKRALTPRDY EEEECCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHEEECCCCEEECCCCCCCCCCCCH DGLLSTVATTCKRFFDNGVLGTGSYIDPEDGVTKVADFGFVIRSRPEDVLSLTADQRKKR HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHCHHHHHCC VYPLTTLLVILGRAGHVAEINATVE CCHHHHHHHHHCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA