| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is yyaM [H]
Identifier: 153948488
GI number: 153948488
Start: 1656060
End: 1656977
Strand: Reverse
Name: yyaM [H]
Synonym: YpsIP31758_1415
Alternate gene names: 153948488
Gene position: 1656977-1656060 (Counterclockwise)
Preceding gene: 153949979
Following gene: 153949972
Centisome position: 35.08
GC content: 49.24
Gene sequence:
>918_bases ATGAATGTTTTATTTCCATTGTTTGCGGTGATTATTTGGTCAGTCAATGCCGTGGTGAGTAAAATCTCCGCCACCGCCAT TGATCCGGCAGCAATCTCCTTCTACCGCTGGTTACTGGCACTGCTGACATTATCCCCATTTCTGCTGCTCGGTGTGGTCC GCAATTGGCAGGCGATACGTGACTATTGGTGGAAATTAATGATCCTGGGAATGCTGGGCATGGTGCTGTACCAAAGCCTG GCTTACTATGCCGCCCACAGTGTCAGCGCACTGTTTATGGGGATCCTAAGCTCATTAATTCCGCTGTTGACGGTGCTTAT CAGTATTGTGTTGTTACGCGTGGCACCAACCGTTGGGATTGCTCTAGGTAGCCTGCTGTCCTTAGGGGGATTAGTTTGGT TGGTCAGTGCGGGCAACCCGGCTCAACTGCTGCAACATGGGATCGGTAAAGGCGAATTAATGATGCTTGGTGCGTCAGCC TCCTATGCGCTGTATGGGGTATTAACAAAGCGCTGGGCCATTCAACTGCCGAATTGGCAATCTCTTTATATGCAAATCGT TTTTGGTGTCGTGCTGCTATTACCTGGCTTCCTGATGACCCCAGACGTGCAGCTAACGGCACAGAATATTCCTTTGGTTC TCTTTGCTGGTATTCCAGCCTCAATTCTTGCACCTTATTTATGGATTCAGGGCGTGATGCGACTGGGTGCCAACAAGGCT TCTATCTTTATGAATCTGACACCCGTCTTTACTGCAATCATTGCCGTAGCCTTCTTGCATGAGCAGTTGCACCGCTATCA CTTGATTGGTGGCGGCATTACCCTTGCTGGAGTGGTGCTGGCCCAACGTCTACGCAGACCATTGCGGCGCAATTTAGATC GTGATGGACATATCCCAAACAATAAAAACAGTAGATAA
Upstream 100 bases:
>100_bases ATTGTCTTAATCACCCAAGTCATTGTCTGATTATCGTTATATAGAATAAATCAGACAGCTGTAGACTACACCGCATATTT TTTAGTTAAGAATTATTATC
Downstream 100 bases:
>100_bases CGGCGAGACGCCTGGTAGGACCCCAAGTGAGTATAAATATATATACCCAAAATAATTCGAGTGGCAGGAAGGTGGCAACT GCGTCAGTCCCCAGGAGATT
Product: integral membrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 305; Mature: 305
Protein sequence:
>305_residues MNVLFPLFAVIIWSVNAVVSKISATAIDPAAISFYRWLLALLTLSPFLLLGVVRNWQAIRDYWWKLMILGMLGMVLYQSL AYYAAHSVSALFMGILSSLIPLLTVLISIVLLRVAPTVGIALGSLLSLGGLVWLVSAGNPAQLLQHGIGKGELMMLGASA SYALYGVLTKRWAIQLPNWQSLYMQIVFGVVLLLPGFLMTPDVQLTAQNIPLVLFAGIPASILAPYLWIQGVMRLGANKA SIFMNLTPVFTAIIAVAFLHEQLHRYHLIGGGITLAGVVLAQRLRRPLRRNLDRDGHIPNNKNSR
Sequences:
>Translated_305_residues MNVLFPLFAVIIWSVNAVVSKISATAIDPAAISFYRWLLALLTLSPFLLLGVVRNWQAIRDYWWKLMILGMLGMVLYQSL AYYAAHSVSALFMGILSSLIPLLTVLISIVLLRVAPTVGIALGSLLSLGGLVWLVSAGNPAQLLQHGIGKGELMMLGASA SYALYGVLTKRWAIQLPNWQSLYMQIVFGVVLLLPGFLMTPDVQLTAQNIPLVLFAGIPASILAPYLWIQGVMRLGANKA SIFMNLTPVFTAIIAVAFLHEQLHRYHLIGGGITLAGVVLAQRLRRPLRRNLDRDGHIPNNKNSR >Mature_305_residues MNVLFPLFAVIIWSVNAVVSKISATAIDPAAISFYRWLLALLTLSPFLLLGVVRNWQAIRDYWWKLMILGMLGMVLYQSL AYYAAHSVSALFMGILSSLIPLLTVLISIVLLRVAPTVGIALGSLLSLGGLVWLVSAGNPAQLLQHGIGKGELMMLGASA SYALYGVLTKRWAIQLPNWQSLYMQIVFGVVLLLPGFLMTPDVQLTAQNIPLVLFAGIPASILAPYLWIQGVMRLGANKA SIFMNLTPVFTAIIAVAFLHEQLHRYHLIGGGITLAGVVLAQRLRRPLRRNLDRDGHIPNNKNSR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 DUF6 domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000620 [H]
Pfam domain/function: PF00892 DUF6 [H]
EC number: NA
Molecular weight: Translated: 33433; Mature: 33433
Theoretical pI: Translated: 10.86; Mature: 10.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNVLFPLFAVIIWSVNAVVSKISATAIDPAAISFYRWLLALLTLSPFLLLGVVRNWQAIR CCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DYWWKLMILGMLGMVLYQSLAYYAAHSVSALFMGILSSLIPLLTVLISIVLLRVAPTVGI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALGSLLSLGGLVWLVSAGNPAQLLQHGIGKGELMMLGASASYALYGVLTKRWAIQLPNWQ HHHHHHHHHHHEEEEECCCHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHEECCCHH SLYMQIVFGVVLLLPGFLMTPDVQLTAQNIPLVLFAGIPASILAPYLWIQGVMRLGANKA HHHHHHHHHHHHHHCCHHCCCCCEEEECCCCEEEECCCCHHHHHHHHHHHHHHHHCCCHH SIFMNLTPVFTAIIAVAFLHEQLHRYHLIGGGITLAGVVLAQRLRRPLRRNLDRDGHIPN HHEEEHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC NKNSR CCCCC >Mature Secondary Structure MNVLFPLFAVIIWSVNAVVSKISATAIDPAAISFYRWLLALLTLSPFLLLGVVRNWQAIR CCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DYWWKLMILGMLGMVLYQSLAYYAAHSVSALFMGILSSLIPLLTVLISIVLLRVAPTVGI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALGSLLSLGGLVWLVSAGNPAQLLQHGIGKGELMMLGASASYALYGVLTKRWAIQLPNWQ HHHHHHHHHHHEEEEECCCHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHEECCCHH SLYMQIVFGVVLLLPGFLMTPDVQLTAQNIPLVLFAGIPASILAPYLWIQGVMRLGANKA HHHHHHHHHHHHHHCCHHCCCCCEEEECCCCEEEECCCCHHHHHHHHHHHHHHHHCCCHH SIFMNLTPVFTAIIAVAFLHEQLHRYHLIGGGITLAGVVLAQRLRRPLRRNLDRDGHIPN HHEEEHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC NKNSR CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7584024; 9384377 [H]