| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is 153948460
Identifier: 153948460
GI number: 153948460
Start: 927592
End: 928482
Strand: Direct
Name: 153948460
Synonym: YpsIP31758_0771
Alternate gene names: NA
Gene position: 927592-928482 (Clockwise)
Preceding gene: 153947997
Following gene: 153946885
Centisome position: 19.64
GC content: 36.48
Gene sequence:
>891_bases ATGACCACTGAAAAAGTAGAAATGATAGACATATGCAAAATCATGGTTAGTAATCCAAGAGACCGGGATGTGTTTACTCA TAATGAAATAAAAGAAAACATTAACCAGATTGGCCTTAAACGGCCCATCACGGTGAGAAGGATGGTTCATGATCACTTTG AATATGCACTGATTTGCGGGCAAGGTCGACTGGAAGCGTATCAAGAGTATAAAGAAACCATGATCCCAGCAATAGTTAAA AATGTCGATGAAGAAACAGGACATTTAATGAGTCTGGCTGAAAATATAGCTCGTAGAAAACCGAGAGCAGGAGAGCTTCT TGGCTGTGTAAGACAATTAAAAATGCAGGGTCTGACAGATAAAGAAATCGGGTATCGGCTAGGTTATACAACCAGTTGGG TTCATGGTGTCATGAATCTCATTGAAAGAGGGGAAAAAAAACTGCTCATTGCATTTGAATCAGGTTATATCCCATTATAT CTGGCCGTAGAAATATCAAGAGCTGACGATAATGAAACCCAAAAGTCACTTACTGAAGCTCTTCTCAACGGACAGATAAA AGGAAATCAAATAAACCGCATCAAACGTATTCTTGACAGACGAAAAGAAGGAAGCAAAGGTGCTATTAACAATACATATA CAAATGGTCGTCCTCAGAAAAAGTTGAGTCCAGAAGAATTATCAAAAATATATCAGAAAAATGTCAATGAACATAAAGAT ATCCTTGTTAAATCTAACTACGTCAATGAAACCATATTGGCCGTCAAGGAGATATTCAAGCAATTAATAGAAGATGATGA CTTCTGTTCAGTATTGCGGAATAACAATATCACCAATATGCCTGAGGCTCTGCTTGATAAAAATTTTAATAAGGATAAAA ATTATGATTAA
Upstream 100 bases:
>100_bases AAGAGAAAAATACATTCGGTCTCGAATTGTATAATTTTAATACACTTAATCCATTTTACCATTTAGTGAGAAGAACAACA TTTATAGAGAAAATAAAACG
Downstream 100 bases:
>100_bases GCAATGTTTTAATCAGCAGTTTCAAACATTCACGATAGCAAGCCTTGTGCATTCTAAGTCACTGCCAATCAATGTGAAAT CCAGTATAAAGTATAAGCAA
Product: ParB family protein
Products: NA
Alternate protein names: Partitioning Protein; ParB-Like Partition Protein; RepB Plasmid Partition; Nuclease; Stage 0 Sporulation Protein J; ParB-Like Partioning Protein; Partitioning Protein ParB; Parb-Like Nuclease Protein; Transcriptional Regulator; Parb-Like Partition Protein; ParB-Like Protein; Chromosome Partitionning Protein ParB; Plasmid Partitioning Protein; ParB Domain Protein Nuclease
Number of amino acids: Translated: 296; Mature: 295
Protein sequence:
>296_residues MTTEKVEMIDICKIMVSNPRDRDVFTHNEIKENINQIGLKRPITVRRMVHDHFEYALICGQGRLEAYQEYKETMIPAIVK NVDEETGHLMSLAENIARRKPRAGELLGCVRQLKMQGLTDKEIGYRLGYTTSWVHGVMNLIERGEKKLLIAFESGYIPLY LAVEISRADDNETQKSLTEALLNGQIKGNQINRIKRILDRRKEGSKGAINNTYTNGRPQKKLSPEELSKIYQKNVNEHKD ILVKSNYVNETILAVKEIFKQLIEDDDFCSVLRNNNITNMPEALLDKNFNKDKNYD
Sequences:
>Translated_296_residues MTTEKVEMIDICKIMVSNPRDRDVFTHNEIKENINQIGLKRPITVRRMVHDHFEYALICGQGRLEAYQEYKETMIPAIVK NVDEETGHLMSLAENIARRKPRAGELLGCVRQLKMQGLTDKEIGYRLGYTTSWVHGVMNLIERGEKKLLIAFESGYIPLY LAVEISRADDNETQKSLTEALLNGQIKGNQINRIKRILDRRKEGSKGAINNTYTNGRPQKKLSPEELSKIYQKNVNEHKD ILVKSNYVNETILAVKEIFKQLIEDDDFCSVLRNNNITNMPEALLDKNFNKDKNYD >Mature_295_residues TTEKVEMIDICKIMVSNPRDRDVFTHNEIKENINQIGLKRPITVRRMVHDHFEYALICGQGRLEAYQEYKETMIPAIVKN VDEETGHLMSLAENIARRKPRAGELLGCVRQLKMQGLTDKEIGYRLGYTTSWVHGVMNLIERGEKKLLIAFESGYIPLYL AVEISRADDNETQKSLTEALLNGQIKGNQINRIKRILDRRKEGSKGAINNTYTNGRPQKKLSPEELSKIYQKNVNEHKDI LVKSNYVNETILAVKEIFKQLIEDDDFCSVLRNNNITNMPEALLDKNFNKDKNYD
Specific function: Unknown
COG id: COG1475
COG function: function code K; Predicted transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34159; Mature: 34028
Theoretical pI: Translated: 8.55; Mature: 8.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTEKVEMIDICKIMVSNPRDRDVFTHNEIKENINQIGLKRPITVRRMVHDHFEYALICG CCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHEEEEEC QGRLEAYQEYKETMIPAIVKNVDEETGHLMSLAENIARRKPRAGELLGCVRQLKMQGLTD CCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCC KEIGYRLGYTTSWVHGVMNLIERGEKKLLIAFESGYIPLYLAVEISRADDNETQKSLTEA HHHCEECCCHHHHHHHHHHHHHCCCCEEEEEEECCCEEEEEEEEEECCCCCHHHHHHHHH LLNGQIKGNQINRIKRILDRRKEGSKGAINNTYTNGRPQKKLSPEELSKIYQKNVNEHKD HHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHH ILVKSNYVNETILAVKEIFKQLIEDDDFCSVLRNNNITNMPEALLDKNFNKDKNYD EEEECCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCHHHHCCCCCCCCCCC >Mature Secondary Structure TTEKVEMIDICKIMVSNPRDRDVFTHNEIKENINQIGLKRPITVRRMVHDHFEYALICG CCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHEEEEEC QGRLEAYQEYKETMIPAIVKNVDEETGHLMSLAENIARRKPRAGELLGCVRQLKMQGLTD CCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCC KEIGYRLGYTTSWVHGVMNLIERGEKKLLIAFESGYIPLYLAVEISRADDNETQKSLTEA HHHCEECCCHHHHHHHHHHHHHCCCCEEEEEEECCCEEEEEEEEEECCCCCHHHHHHHHH LLNGQIKGNQINRIKRILDRRKEGSKGAINNTYTNGRPQKKLSPEELSKIYQKNVNEHKD HHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHH ILVKSNYVNETILAVKEIFKQLIEDDDFCSVLRNNNITNMPEALLDKNFNKDKNYD EEEECCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA