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The map label for this gene is yhjV [H]

Identifier: 153948413

GI number: 153948413

Start: 4292298

End: 4293584

Strand: Reverse

Name: yhjV [H]

Synonym: YpsIP31758_3807

Alternate gene names: 153948413

Gene position: 4293584-4292298 (Counterclockwise)

Preceding gene: 153949748

Following gene: 153947968

Centisome position: 90.9

GC content: 39.24

Gene sequence:

>1287_bases
ATGTCTGAAATCTCGTCTTCAAAATCTGAATTAAAAAAGCTCTATAAATCGGTTCCCTTTACACAGTATGATGTCGGTTG
GGTCATATTATGTATCGGGATGGCTATCGGATCAGGTATCGTATTTATGCCTGTACAGGTTGGTATTAAGGGGATTTGGG
TCTTTATTGCTGCGGTTATTATTTCGTATCCTGCAATTTATTTACTGCAGAATCTCTATCTGCGTACACTTTCTGAATCT
GATAACTGTACTGATTATACCAGTGTCATTACGCAATATTTAGGTAAGAACTGGGGGGTAGGTCTCGGTATTGCTTATTT
TTTAATGTTATTGCACGGGATGTTTTCTTATTCCCTGGCCGTCACCTTTGATAGTGCCTCTTACATCAAAACATTTGGAT
TAACTGAAGGCTTATTATCAGATTCAATATGGTACGGGTTAATTATCTTGACAGTTTTGGTTGCCATTGCTGCACAAGGT
GAAAAAATTCTATTTAAAGTTTCGGGACCCATGGTTTGTGTGAAGTTTGGCATCATTGTGGTGTTGGGTGTTGTAATGGT
TCCTTATTGGGATTTTAACAATATCTCCGCTTTTCCTGAACTCTTCTCCTTTTTACGCGATGTCCTGTTAACACTACCGT
TCACATTATTCTCTATCTTATTTGTTCAAATTCTTAGCCCAATGAATATTGCTTATCGTAAAGTGGAAAGCGATAAAAGA
ATTGCCACCTACCGGGCCATCAGAGCAAACCGTGTTGCTTATATCATTTTGGCTGTTGCAGTGCTGTTCTTTGCCTTCTC
TTTTACTTTCTCGATTAGCCATGAGCAGGCTGTCTCGGCGTTTGAACAAAATATCTCTGCCCTGGCGATTGCCGCTCAGG
TTATTCCCGGTTCGATTGTCCGTATCATGACTGCATTATTAAATATTTTTGCTATCTTGACGGCGTTCTTGGGGATCTAT
TTAGGATTTCAGGAGGCGATTAAAGGTATTGTCGTTAATATTATCAGTCGCTTTATCCCTGAAGAGAATATTAATCAGAA
AGTGCTACACATCGGGGTCTGTGTCGGTGTGATATTAACGTTATGGCTATGGGTCTCAACCCGGTTCTCTATTCTTTTCT
TCTTACAACTTGGCGGCCCGTTATTCGGGGTGGTCTCTTGTTTAATTCCTTGCTACCTGGTTTATAAAGTTCCTGTTTTA
CATAAATTAAAAGGGCCAACTATTTGGTTTATCAGCTTTTTCGGTATTCTTCTTTGTCTTTCCCCATTCTTTAAATTCTT
TGAGTAA

Upstream 100 bases:

>100_bases
CTTTTTTGTAGATAGTCAAACGGTTTTATTTTTCGATTTTACGCCAGGAAGGTAGTTAACTTAATGTAATTAAAGTAAAA
ATAAAATAAGAGGGTGAAGT

Downstream 100 bases:

>100_bases
CGTGGCTAAAAACAGGAATGAATCTGGTTTAATAAGAGGTAGGTAATGAATAAAAAAGATATTTCTAGTTTTGGTATTAG
TACTCAAATAACACAACTGG

Product: serine transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 428; Mature: 427

Protein sequence:

>428_residues
MSEISSSKSELKKLYKSVPFTQYDVGWVILCIGMAIGSGIVFMPVQVGIKGIWVFIAAVIISYPAIYLLQNLYLRTLSES
DNCTDYTSVITQYLGKNWGVGLGIAYFLMLLHGMFSYSLAVTFDSASYIKTFGLTEGLLSDSIWYGLIILTVLVAIAAQG
EKILFKVSGPMVCVKFGIIVVLGVVMVPYWDFNNISAFPELFSFLRDVLLTLPFTLFSILFVQILSPMNIAYRKVESDKR
IATYRAIRANRVAYIILAVAVLFFAFSFTFSISHEQAVSAFEQNISALAIAAQVIPGSIVRIMTALLNIFAILTAFLGIY
LGFQEAIKGIVVNIISRFIPEENINQKVLHIGVCVGVILTLWLWVSTRFSILFFLQLGGPLFGVVSCLIPCYLVYKVPVL
HKLKGPTIWFISFFGILLCLSPFFKFFE

Sequences:

>Translated_428_residues
MSEISSSKSELKKLYKSVPFTQYDVGWVILCIGMAIGSGIVFMPVQVGIKGIWVFIAAVIISYPAIYLLQNLYLRTLSES
DNCTDYTSVITQYLGKNWGVGLGIAYFLMLLHGMFSYSLAVTFDSASYIKTFGLTEGLLSDSIWYGLIILTVLVAIAAQG
EKILFKVSGPMVCVKFGIIVVLGVVMVPYWDFNNISAFPELFSFLRDVLLTLPFTLFSILFVQILSPMNIAYRKVESDKR
IATYRAIRANRVAYIILAVAVLFFAFSFTFSISHEQAVSAFEQNISALAIAAQVIPGSIVRIMTALLNIFAILTAFLGIY
LGFQEAIKGIVVNIISRFIPEENINQKVLHIGVCVGVILTLWLWVSTRFSILFFLQLGGPLFGVVSCLIPCYLVYKVPVL
HKLKGPTIWFISFFGILLCLSPFFKFFE
>Mature_427_residues
SEISSSKSELKKLYKSVPFTQYDVGWVILCIGMAIGSGIVFMPVQVGIKGIWVFIAAVIISYPAIYLLQNLYLRTLSESD
NCTDYTSVITQYLGKNWGVGLGIAYFLMLLHGMFSYSLAVTFDSASYIKTFGLTEGLLSDSIWYGLIILTVLVAIAAQGE
KILFKVSGPMVCVKFGIIVVLGVVMVPYWDFNNISAFPELFSFLRDVLLTLPFTLFSILFVQILSPMNIAYRKVESDKRI
ATYRAIRANRVAYIILAVAVLFFAFSFTFSISHEQAVSAFEQNISALAIAAQVIPGSIVRIMTALLNIFAILTAFLGIYL
GFQEAIKGIVVNIISRFIPEENINQKVLHIGVCVGVILTLWLWVSTRFSILFFLQLGGPLFGVVSCLIPCYLVYKVPVLH
KLKGPTIWFISFFGILLCLSPFFKFFE

Specific function: Unknown

COG id: COG0814

COG function: function code E; Amino acid permeases

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid/polyamine transporter 2 family. SdaC/TdcC subfamily [H]

Homologues:

Organism=Escherichia coli, GI1789961, Length=410, Percent_Identity=61.9512195121951, Blast_Score=524, Evalue=1e-150,
Organism=Escherichia coli, GI145693183, Length=423, Percent_Identity=51.5366430260047, Blast_Score=437, Evalue=1e-124,
Organism=Escherichia coli, GI1789160, Length=415, Percent_Identity=26.0240963855422, Blast_Score=117, Evalue=2e-27,
Organism=Escherichia coli, GI1789504, Length=460, Percent_Identity=23.9130434782609, Blast_Score=92, Evalue=4e-20,
Organism=Escherichia coli, GI1789211, Length=392, Percent_Identity=20.1530612244898, Blast_Score=70, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004694
- InterPro:   IPR018227 [H]

Pfam domain/function: PF03222 Trp_Tyr_perm [H]

EC number: NA

Molecular weight: Translated: 47690; Mature: 47558

Theoretical pI: Translated: 8.91; Mature: 8.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEISSSKSELKKLYKSVPFTQYDVGWVILCIGMAIGSGIVFMPVQVGIKGIWVFIAAVI
CCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHH
ISYPAIYLLQNLYLRTLSESDNCTDYTSVITQYLGKNWGVGLGIAYFLMLLHGMFSYSLA
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHE
VTFDSASYIKTFGLTEGLLSDSIWYGLIILTVLVAIAAQGEKILFKVSGPMVCVKFGIIV
EEECCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHH
VLGVVMVPYWDFNNISAFPELFSFLRDVLLTLPFTLFSILFVQILSPMNIAYRKVESDKR
HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCH
IATYRAIRANRVAYIILAVAVLFFAFSFTFSISHEQAVSAFEQNISALAIAAQVIPGSIV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHH
RIMTALLNIFAILTAFLGIYLGFQEAIKGIVVNIISRFIPEENINQKVLHIGVCVGVILT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
LWLWVSTRFSILFFLQLGGPLFGVVSCLIPCYLVYKVPVLHKLKGPTIWFISFFGILLCL
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHH
SPFFKFFE
HHHHHHCC
>Mature Secondary Structure 
SEISSSKSELKKLYKSVPFTQYDVGWVILCIGMAIGSGIVFMPVQVGIKGIWVFIAAVI
CCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHH
ISYPAIYLLQNLYLRTLSESDNCTDYTSVITQYLGKNWGVGLGIAYFLMLLHGMFSYSLA
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHE
VTFDSASYIKTFGLTEGLLSDSIWYGLIILTVLVAIAAQGEKILFKVSGPMVCVKFGIIV
EEECCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHH
VLGVVMVPYWDFNNISAFPELFSFLRDVLLTLPFTLFSILFVQILSPMNIAYRKVESDKR
HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCH
IATYRAIRANRVAYIILAVAVLFFAFSFTFSISHEQAVSAFEQNISALAIAAQVIPGSIV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHH
RIMTALLNIFAILTAFLGIYLGFQEAIKGIVVNIISRFIPEENINQKVLHIGVCVGVILT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
LWLWVSTRFSILFFLQLGGPLFGVVSCLIPCYLVYKVPVLHKLKGPTIWFISFFGILLCL
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHH
SPFFKFFE
HHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503 [H]