Click here to switch to the map view.

The map label for this gene is ssuA [H]

Identifier: 153948409

GI number: 153948409

Start: 412629

End: 413750

Strand: Direct

Name: ssuA [H]

Synonym: YpsIP31758_0353

Alternate gene names: 153948409

Gene position: 412629-413750 (Clockwise)

Preceding gene: 153947954

Following gene: 153950813

Centisome position: 8.74

GC content: 51.16

Gene sequence:

>1122_bases
ATGTCGCTATCTTTCTTCTTTCGTCGTGGGTTCAACGTTCACCGCTGGCTCAATATCGGGGCAATGGCCGCTATTATTAC
GTTAGCGTTTACTAATACAGTGATTGCACAGGATAGCGCCCCGGCCCAGTTCCGCATTGGGTACCAAAAAGGCTCGGTGA
ATCTGGTGTTGGCGAAAACTCACCAATTGCTGGAAAAACGCTTTCCTGATACCCAAATTAGCTGGATTGAATTCCCGGCA
GGCCCGCAAATGCTCGAAGCGTTGAACGTCAACAGCATCGATTTGGGCAGTACTGGCGATATTCCCCCCATTTTTGCTCA
GGCTGCTGGCGCTGATCTGCTGTATGTCGGCATGGAGCCGCCGAAACCGAAGGCAGAAGTGATTTTGGTGCCGGAAAACA
GCGCAATTAGCAGCGTTGCTGAACTGAAAGGCCATAAAGTGGCTTTCCAGAAAGGTTCCAGCTCACACAACCTGCTCTTG
CAGGCACTGCAAAAAGCGGGGCTAAAATTTACCGATATCCAACCTGTCTACCTCACGCCTGCTGATGCACGAGCGGCTTT
CCAACAGGGCAATGTTGATGCTTGGGTCATTTGGGATCCCTACTATTCCGCCGCCTTGTTGCAAGGGGGCATACGGGTAC
TGATAGATGGCAGCCAATTAAATCAGACGGGCTCTTTTTATCTGGCTTCTCGTCCTTATACCGAAGCTAACGGCCCATTT
ATTCAGCAGGTGCTGGAGGTGCTGACGCAGGCTGATGCGTTGACGCTTAGCGATCGAGCACAAAGTATCACGCTACTAGC
CAACGCGATGGGGCTACCAGAGGCCGTGATTGCCAGCTATCTGGATCATCGTCCCCCCACGGCTATCCAGCCTTTGAGTC
AGGCGACGGTTGCTGCCCAACAAAGAACGGCCGATCTGTTTTTCGCCAACCGGCTGTTACCGGTCAAAGTGGATATTTCG
CAACGTGTTTGGCAGCCAGCCGGGCAATTATCCTCAAAGCCACCATCTTCAAAGCCATCATCTTCAAAGCCATCATCTCC
AAGCCAATTACCTACAGATCAACCGTCTATAGCGCAGACATCTATAGAGCAATCATCTACAGCAAAATCACAGACCAAAT
AA

Upstream 100 bases:

>100_bases
AAAGCTTCTATCTGGCACTCGGTCGCCGTAAACCCTTGGCGTCTAACGCTGTGTCATCTTCGTTGGTTCAGCAAACGGCT
GCCTAATAAAGGGAATCATT

Downstream 100 bases:

>100_bases
TGATAAGGAGAGCCTGCTATGAGCATTAACGTATTCTGGTTTTTACCTACCCATGGCGATGGCCACTATCTGGGCAGTTC
TGAAGGGGCACGCGCGGTCG

Product: alkanesulfonate transporter substrate-binding subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 373; Mature: 372

Protein sequence:

>373_residues
MSLSFFFRRGFNVHRWLNIGAMAAIITLAFTNTVIAQDSAPAQFRIGYQKGSVNLVLAKTHQLLEKRFPDTQISWIEFPA
GPQMLEALNVNSIDLGSTGDIPPIFAQAAGADLLYVGMEPPKPKAEVILVPENSAISSVAELKGHKVAFQKGSSSHNLLL
QALQKAGLKFTDIQPVYLTPADARAAFQQGNVDAWVIWDPYYSAALLQGGIRVLIDGSQLNQTGSFYLASRPYTEANGPF
IQQVLEVLTQADALTLSDRAQSITLLANAMGLPEAVIASYLDHRPPTAIQPLSQATVAAQQRTADLFFANRLLPVKVDIS
QRVWQPAGQLSSKPPSSKPSSSKPSSPSQLPTDQPSIAQTSIEQSSTAKSQTK

Sequences:

>Translated_373_residues
MSLSFFFRRGFNVHRWLNIGAMAAIITLAFTNTVIAQDSAPAQFRIGYQKGSVNLVLAKTHQLLEKRFPDTQISWIEFPA
GPQMLEALNVNSIDLGSTGDIPPIFAQAAGADLLYVGMEPPKPKAEVILVPENSAISSVAELKGHKVAFQKGSSSHNLLL
QALQKAGLKFTDIQPVYLTPADARAAFQQGNVDAWVIWDPYYSAALLQGGIRVLIDGSQLNQTGSFYLASRPYTEANGPF
IQQVLEVLTQADALTLSDRAQSITLLANAMGLPEAVIASYLDHRPPTAIQPLSQATVAAQQRTADLFFANRLLPVKVDIS
QRVWQPAGQLSSKPPSSKPSSSKPSSPSQLPTDQPSIAQTSIEQSSTAKSQTK
>Mature_372_residues
SLSFFFRRGFNVHRWLNIGAMAAIITLAFTNTVIAQDSAPAQFRIGYQKGSVNLVLAKTHQLLEKRFPDTQISWIEFPAG
PQMLEALNVNSIDLGSTGDIPPIFAQAAGADLLYVGMEPPKPKAEVILVPENSAISSVAELKGHKVAFQKGSSSHNLLLQ
ALQKAGLKFTDIQPVYLTPADARAAFQQGNVDAWVIWDPYYSAALLQGGIRVLIDGSQLNQTGSFYLASRPYTEANGPFI
QQVLEVLTQADALTLSDRAQSITLLANAMGLPEAVIASYLDHRPPTAIQPLSQATVAAQQRTADLFFANRLLPVKVDISQ
RVWQPAGQLSSKPPSSKPSSSKPSSPSQLPTDQPSIAQTSIEQSSTAKSQTK

Specific function: Part of a binding-protein-dependent transport system for aliphatic sulfonates. Putative binding protein [H]

COG id: COG0715

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein ssuA/tauA family [H]

Homologues:

Organism=Escherichia coli, GI87081803, Length=316, Percent_Identity=73.4177215189873, Blast_Score=481, Evalue=1e-137,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010067
- InterPro:   IPR015168
- InterPro:   IPR001638 [H]

Pfam domain/function: PF09084 NMT1 [H]

EC number: NA

Molecular weight: Translated: 40278; Mature: 40147

Theoretical pI: Translated: 9.17; Mature: 9.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLSFFFRRGFNVHRWLNIGAMAAIITLAFTNTVIAQDSAPAQFRIGYQKGSVNLVLAKT
CCCEEHHHCCCCCHHHHHHHHHHHHHHHHHHHHEEECCCCCCEEEEEEECCCEEEEEHHH
HQLLEKRFPDTQISWIEFPAGPQMLEALNVNSIDLGSTGDIPPIFAQAAGADLLYVGMEP
HHHHHHHCCCCCEEEEECCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCEEEECCCC
PKPKAEVILVPENSAISSVAELKGHKVAFQKGSSSHNLLLQALQKAGLKFTDIQPVYLTP
CCCCCCEEEEECCHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHCCCEEECCCEEEECC
ADARAAFQQGNVDAWVIWDPYYSAALLQGGIRVLIDGSQLNQTGSFYLASRPYTEANGPF
CHHHHHHHCCCCCEEEEECCHHHHHHHHCCEEEEEECCCCCCCCCEEEEECCCCCCCCHH
IQQVLEVLTQADALTLSDRAQSITLLANAMGLPEAVIASYLDHRPPTAIQPLSQATVAAQ
HHHHHHHHHHCCCEEECHHHHEEEEHHHHCCCCHHHHHHHHHCCCCHHHCCHHHHHHHHH
QRTADLFFANRLLPVKVDISQRVWQPAGQLSSKPPSSKPSSSKPSSPSQLPTDQPSIAQT
HHHHHHHHHCCEEEEEECHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH
SIEQSSTAKSQTK
HHHHHHCCCCCCC
>Mature Secondary Structure 
SLSFFFRRGFNVHRWLNIGAMAAIITLAFTNTVIAQDSAPAQFRIGYQKGSVNLVLAKT
CCEEHHHCCCCCHHHHHHHHHHHHHHHHHHHHEEECCCCCCEEEEEEECCCEEEEEHHH
HQLLEKRFPDTQISWIEFPAGPQMLEALNVNSIDLGSTGDIPPIFAQAAGADLLYVGMEP
HHHHHHHCCCCCEEEEECCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCEEEECCCC
PKPKAEVILVPENSAISSVAELKGHKVAFQKGSSSHNLLLQALQKAGLKFTDIQPVYLTP
CCCCCCEEEEECCHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHCCCEEECCCEEEECC
ADARAAFQQGNVDAWVIWDPYYSAALLQGGIRVLIDGSQLNQTGSFYLASRPYTEANGPF
CHHHHHHHCCCCCEEEEECCHHHHHHHHCCEEEEEECCCCCCCCCEEEEECCCCCCCCHH
IQQVLEVLTQADALTLSDRAQSITLLANAMGLPEAVIASYLDHRPPTAIQPLSQATVAAQ
HHHHHHHHHHCCCEEECHHHHEEEEHHHHCCCCHHHHHHHHHCCCCHHHCCHHHHHHHHH
QRTADLFFANRLLPVKVDISQRVWQPAGQLSSKPPSSKPSSSKPSSPSQLPTDQPSIAQT
HHHHHHHHHCCEEEEEECHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH
SIEQSSTAKSQTK
HHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10506196; 8905232; 9278503 [H]