| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is 153948345
Identifier: 153948345
GI number: 153948345
Start: 2505022
End: 2506098
Strand: Reverse
Name: 153948345
Synonym: YpsIP31758_2180
Alternate gene names: NA
Gene position: 2506098-2505022 (Counterclockwise)
Preceding gene: 153948927
Following gene: 153950155
Centisome position: 53.06
GC content: 36.95
Gene sequence:
>1077_bases ATGGCAAGCTGCATCCCCCCAAAGGTTCCCGGATACTTACAAAGAATTCGGGAACAATATAAGGAAAGTGAACCTGTTAT TTATAAAGTTCTTAGCCATGCAAAAGTATTTGTTCGCGAAGATTACCATACAGATCATAATTATGATGCTGTTGGTCATG ATATCTGTCTTTTCTTGCCAATGGAGATATTGATAGATATACATATTTCTAAACAGGAAGCATATACAAATTTAATTAAA AACGACCTCAATATTTTGACAAGATCTGTGCATGATGAATGGATAGGTGAAGTTGCATTAGAACTGAATTCTGAGATAGA TCCTGAATATCAACAAGCTATCAGTATCAATGAAATAGTCAACGAGGTGCTGAATCCTGATGAGTTATCCATCTGGAAGC CAAATTTAATTCGAGTTTTTATTAGCCATAGAGACAAATATAAGCGTGAAGCACAAGAATTAGCTAACTCCTTAGAGGAG TACGGCTTCAGTTGTTTTGTTGCCCATGAGACTATCGAACCACTCAAAGAGTGGAGAAATGAGATCGTTAACGGGCTGAA AACAATGGAAGTGATGCTGGTTTTACTAACGGATGATTTCAATGACAGTATCTGGACGTGCCAAGAGGTTGGCTATGCTC TCGGTGCAAATAAACCAGTTGTAACCCTAAAAGTTGGCAAGGTCGATCCCGCTGGTTTTATCAGTCATTTACAAGCGGTT AAAGGGAGCCTCGATAATCCTACGCATAATGCCGAGTTGTTAAATATGCTCTTAGCTGAAAGCATTGGTAAAGCATCAAG AATACAACAAGCACTAATTTCTACATTTATAGCATCTCAGAGTTTTGATGAAGCCAAACATCGATTCAATCGTATGAATA AGAGCATCAAAAAACTTACGGAAGAAAATTTAAATACCGTAATGGATGGATTTCGAAGAAATAATCAGTTGAATCAGTGC ATGTATCTAAATAATAGCTACAACAGACTTAAAACTTTTATTGAACGGACAACAGGAAAAAGCGCAATAACGAGTGGGAA GGAAATATTTATCGAGACTGTAAACAAGATTGTGTAA
Upstream 100 bases:
>100_bases TGCGCGATTATGCTAAAACACATGGGATGCTGTGATTTATTAGGCGTTATTTTCAATAACCAATCAAAGCTCACTCAAAG AAGCCACTAAGAGGGACATT
Downstream 100 bases:
>100_bases TTGCCTGTTTTTGATATCTTCACTCCAACAACGGAGACAGGCAAATTATGGACGAAAAGAAACTTAAAGCACTTGCGGCT GAACTGGCTAAAGGTCTTAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 358; Mature: 357
Protein sequence:
>358_residues MASCIPPKVPGYLQRIREQYKESEPVIYKVLSHAKVFVREDYHTDHNYDAVGHDICLFLPMEILIDIHISKQEAYTNLIK NDLNILTRSVHDEWIGEVALELNSEIDPEYQQAISINEIVNEVLNPDELSIWKPNLIRVFISHRDKYKREAQELANSLEE YGFSCFVAHETIEPLKEWRNEIVNGLKTMEVMLVLLTDDFNDSIWTCQEVGYALGANKPVVTLKVGKVDPAGFISHLQAV KGSLDNPTHNAELLNMLLAESIGKASRIQQALISTFIASQSFDEAKHRFNRMNKSIKKLTEENLNTVMDGFRRNNQLNQC MYLNNSYNRLKTFIERTTGKSAITSGKEIFIETVNKIV
Sequences:
>Translated_358_residues MASCIPPKVPGYLQRIREQYKESEPVIYKVLSHAKVFVREDYHTDHNYDAVGHDICLFLPMEILIDIHISKQEAYTNLIK NDLNILTRSVHDEWIGEVALELNSEIDPEYQQAISINEIVNEVLNPDELSIWKPNLIRVFISHRDKYKREAQELANSLEE YGFSCFVAHETIEPLKEWRNEIVNGLKTMEVMLVLLTDDFNDSIWTCQEVGYALGANKPVVTLKVGKVDPAGFISHLQAV KGSLDNPTHNAELLNMLLAESIGKASRIQQALISTFIASQSFDEAKHRFNRMNKSIKKLTEENLNTVMDGFRRNNQLNQC MYLNNSYNRLKTFIERTTGKSAITSGKEIFIETVNKIV >Mature_357_residues ASCIPPKVPGYLQRIREQYKESEPVIYKVLSHAKVFVREDYHTDHNYDAVGHDICLFLPMEILIDIHISKQEAYTNLIKN DLNILTRSVHDEWIGEVALELNSEIDPEYQQAISINEIVNEVLNPDELSIWKPNLIRVFISHRDKYKREAQELANSLEEY GFSCFVAHETIEPLKEWRNEIVNGLKTMEVMLVLLTDDFNDSIWTCQEVGYALGANKPVVTLKVGKVDPAGFISHLQAVK GSLDNPTHNAELLNMLLAESIGKASRIQQALISTFIASQSFDEAKHRFNRMNKSIKKLTEENLNTVMDGFRRNNQLNQCM YLNNSYNRLKTFIERTTGKSAITSGKEIFIETVNKIV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41031; Mature: 40900
Theoretical pI: Translated: 5.80; Mature: 5.80
Prosite motif: PS00290 IG_MHC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASCIPPKVPGYLQRIREQYKESEPVIYKVLSHAKVFVREDYHTDHNYDAVGHDICLFLP CCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH MEILIDIHISKQEAYTNLIKNDLNILTRSVHDEWIGEVALELNSEIDPEYQQAISINEIV HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH NEVLNPDELSIWKPNLIRVFISHRDKYKREAQELANSLEEYGFSCFVAHETIEPLKEWRN HHHCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHH EIVNGLKTMEVMLVLLTDDFNDSIWTCQEVGYALGANKPVVTLKVGKVDPAGFISHLQAV HHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHH KGSLDNPTHNAELLNMLLAESIGKASRIQQALISTFIASQSFDEAKHRFNRMNKSIKKLT HCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH EENLNTVMDGFRRNNQLNQCMYLNNSYNRLKTFIERTTGKSAITSGKEIFIETVNKIV HHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHCC >Mature Secondary Structure ASCIPPKVPGYLQRIREQYKESEPVIYKVLSHAKVFVREDYHTDHNYDAVGHDICLFLP CCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH MEILIDIHISKQEAYTNLIKNDLNILTRSVHDEWIGEVALELNSEIDPEYQQAISINEIV HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH NEVLNPDELSIWKPNLIRVFISHRDKYKREAQELANSLEEYGFSCFVAHETIEPLKEWRN HHHCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHH EIVNGLKTMEVMLVLLTDDFNDSIWTCQEVGYALGANKPVVTLKVGKVDPAGFISHLQAV HHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHH KGSLDNPTHNAELLNMLLAESIGKASRIQQALISTFIASQSFDEAKHRFNRMNKSIKKLT HCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH EENLNTVMDGFRRNNQLNQCMYLNNSYNRLKTFIERTTGKSAITSGKEIFIETVNKIV HHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA