| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
Click here to switch to the map view.
The map label for this gene is 153948344
Identifier: 153948344
GI number: 153948344
Start: 4178309
End: 4180441
Strand: Direct
Name: 153948344
Synonym: YpsIP31758_3703
Alternate gene names: NA
Gene position: 4178309-4180441 (Clockwise)
Preceding gene: 153949915
Following gene: 153947653
Centisome position: 88.46
GC content: 44.07
Gene sequence:
>2133_bases ATGTTTGATTTTAGCAACCCAGTTACCATGATTTATGGTCAGAATGGTACTGGTAAATCTACTATTTCGGGTTATTTTTA CCGCCCCAATCATACCGATTTTGCTGGTTGTACGTTTATTCCTTCGTTAGACATGCGCACTCTGGTCTTCAGCCAAGAAT ACGTAACGGATATTTTTAGTACACCTTTCCAGCCTGGAGTTTTCTCCCTAAGCGAAGAAAATACAACAGTAAGAGAGGAA ATCGCAGCGCTTGATGATGGAATTAGCCGACTGAGCGTGGAAATTCAGACTAATAAAAGCGAGCATCAGAAAAAAACTGA AATGGTCACTCGTGTTAAGGAACAATGCGAGAATGCCATTAAGGGCTGTGTAGCTGAAATTAAAAAGACAGCTCTGTGGG ATCTGATGGAGGGAGCGAAACAGGGACCTCGTCTGTACCAGACTATTATCAGTCATACGGACACGATCAACACTTCAACC GCTGAGCTGGAAGCGGCTTTTCGACAGCTTCTGTCAAGTCAAGGTAACCATTTATCACCGCTGGCTGAATTGACTATGTT GATTCTTACTAAAGAAGATGCTGACTTGCTAGCTCAGGTGCTAGTACCATCAGGTGACAGTCGGCTTGCCGCCGCGATTG CGCAACTGGGAAATGCAGAATGGGTAGCAGCAGGAAACGTCTGGCTTATTGAAGACGTCTGTCCATTCTGCCAGAACATC GTTGATGCTGACCATCTGCGCAAAGAAATTGCTTCTCTCTTTGATCGCAGTTGGGAAGACAAAATGGCACGTCTGGAAGC CATATCTTCACAAATTCGCAGCTGGCTCGACAATGCAGATTTGTGGAAGTTGCAAGTACAGTCCTACCCACTTATTGACG CTACAGATACTGTGCAGCTCACGTTAACTACACTCATTCAGAAGTGGTCTAAGAATCTCCGCCTAGTCGAAAGTAAGATC TCTGCACCTTCTGAACTGGTTATATTGGACGATACCGCCAGTGAGGTAGAAAATTTCAATAGCGCATATATCGCGTTGGT TGAGTGCATATCTGCTCATAACCACCGAGCAGATAACTACCAAACCGAATATCAACAGATGAAAAACAGGCTTCTCAGCC ACATTCGCGCGCTATCCGCCGGTTTTATCAGCAATCATGACGTTCAACTTAGAGAACTGTCTGAAGCGTCCAGAGGGGAC GAGAGGGCTCATCAAGTACTTACAGACCGATTGCAAGTATTATACGGGCAGAAGCGTTCTTTGGATGCTCAAATCATTAA CTGCAGTAACACTGTAGATAATATAAATTTCGGTTTGGAAGCCCTTGGCATTAACGGTTTCAAAATCGTCATTCATGATG CTGCACAAGATTCATATCGGCTTGAACGTCCTGATAAGGAGAGTGATGAGGGAATATTCGCTACATTAAGCGAAGGTGAA AAAACTCTGATTGCTTTTTTATACTTCTTGGAAACGTGTGAAGGCAGAACCAGTCGTGATGAGCATGATGTTCGTGAAAA GCTGATAGTCATTGACGATCCTATATCTAGCTTGTCGCAAAACTACATTTTTGAAATTGCGTCATTGATACAACAGCGTG TGATTAAGAGCCATATTGCTGCGAAAGTGATCATACTGACTCACAGTCTGTTCTTTTTCCAAGAGATGCTACTTTCCGCT CAGGGGAAAAAAGACGGCAATGGTTTACCACTAGGATGGTTACTCTATCGCGTTTCAAAAAGTACTCACAGTGTGGCAAG TTTTATCTCAGGTAATGCATTATTAAACGATTATCAGGCGATGTGGTATGTGCTTAAAGAGTCCAGTGATGAGCAAGTCG CCTCTGTTGTAATTCCAAATACCATGAGGCAGATCTTGGAATACTACTTCGGCTTTTCGGGTAAGCACGCCAGACTAAGC GTCACGCTCGAAAAACTTGCCAGTGAACGGGGAGAGCCTGGATTTCGGGCATTCGCTCGTTATATAAACCGGCATTCGCA TGCAGATGCACGTAACATCAAGCTGCTCGAAACCGCATCTGTTGCACATTATCTTGCATGGTTTGAGCGTGTATTTGTAG CTGTAGAGGATCTTGAACATTATGAACTGATGATGGGCAGAAATGGGACATAA
Upstream 100 bases:
>100_bases GAATAAAATGTAAACTTCAGACTGTTGTCCCAAGGAGGGATTAAGCATGAGTATTCTTTCGGTAAATGGCGTACGGAGCT ATCGTGGTCCTGAGCCAGTG
Downstream 100 bases:
>100_bases GATGAGGTTGTCACTTCCTCCGGATTTATCCATCAGCGGGTTGGCAGGGAGCGCGTGTGCATGCACACGTTTTCCCAGCG GCCGAGACGGAAACGCATAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 710; Mature: 710
Protein sequence:
>710_residues MFDFSNPVTMIYGQNGTGKSTISGYFYRPNHTDFAGCTFIPSLDMRTLVFSQEYVTDIFSTPFQPGVFSLSEENTTVREE IAALDDGISRLSVEIQTNKSEHQKKTEMVTRVKEQCENAIKGCVAEIKKTALWDLMEGAKQGPRLYQTIISHTDTINTST AELEAAFRQLLSSQGNHLSPLAELTMLILTKEDADLLAQVLVPSGDSRLAAAIAQLGNAEWVAAGNVWLIEDVCPFCQNI VDADHLRKEIASLFDRSWEDKMARLEAISSQIRSWLDNADLWKLQVQSYPLIDATDTVQLTLTTLIQKWSKNLRLVESKI SAPSELVILDDTASEVENFNSAYIALVECISAHNHRADNYQTEYQQMKNRLLSHIRALSAGFISNHDVQLRELSEASRGD ERAHQVLTDRLQVLYGQKRSLDAQIINCSNTVDNINFGLEALGINGFKIVIHDAAQDSYRLERPDKESDEGIFATLSEGE KTLIAFLYFLETCEGRTSRDEHDVREKLIVIDDPISSLSQNYIFEIASLIQQRVIKSHIAAKVIILTHSLFFFQEMLLSA QGKKDGNGLPLGWLLYRVSKSTHSVASFISGNALLNDYQAMWYVLKESSDEQVASVVIPNTMRQILEYYFGFSGKHARLS VTLEKLASERGEPGFRAFARYINRHSHADARNIKLLETASVAHYLAWFERVFVAVEDLEHYELMMGRNGT
Sequences:
>Translated_710_residues MFDFSNPVTMIYGQNGTGKSTISGYFYRPNHTDFAGCTFIPSLDMRTLVFSQEYVTDIFSTPFQPGVFSLSEENTTVREE IAALDDGISRLSVEIQTNKSEHQKKTEMVTRVKEQCENAIKGCVAEIKKTALWDLMEGAKQGPRLYQTIISHTDTINTST AELEAAFRQLLSSQGNHLSPLAELTMLILTKEDADLLAQVLVPSGDSRLAAAIAQLGNAEWVAAGNVWLIEDVCPFCQNI VDADHLRKEIASLFDRSWEDKMARLEAISSQIRSWLDNADLWKLQVQSYPLIDATDTVQLTLTTLIQKWSKNLRLVESKI SAPSELVILDDTASEVENFNSAYIALVECISAHNHRADNYQTEYQQMKNRLLSHIRALSAGFISNHDVQLRELSEASRGD ERAHQVLTDRLQVLYGQKRSLDAQIINCSNTVDNINFGLEALGINGFKIVIHDAAQDSYRLERPDKESDEGIFATLSEGE KTLIAFLYFLETCEGRTSRDEHDVREKLIVIDDPISSLSQNYIFEIASLIQQRVIKSHIAAKVIILTHSLFFFQEMLLSA QGKKDGNGLPLGWLLYRVSKSTHSVASFISGNALLNDYQAMWYVLKESSDEQVASVVIPNTMRQILEYYFGFSGKHARLS VTLEKLASERGEPGFRAFARYINRHSHADARNIKLLETASVAHYLAWFERVFVAVEDLEHYELMMGRNGT >Mature_710_residues MFDFSNPVTMIYGQNGTGKSTISGYFYRPNHTDFAGCTFIPSLDMRTLVFSQEYVTDIFSTPFQPGVFSLSEENTTVREE IAALDDGISRLSVEIQTNKSEHQKKTEMVTRVKEQCENAIKGCVAEIKKTALWDLMEGAKQGPRLYQTIISHTDTINTST AELEAAFRQLLSSQGNHLSPLAELTMLILTKEDADLLAQVLVPSGDSRLAAAIAQLGNAEWVAAGNVWLIEDVCPFCQNI VDADHLRKEIASLFDRSWEDKMARLEAISSQIRSWLDNADLWKLQVQSYPLIDATDTVQLTLTTLIQKWSKNLRLVESKI SAPSELVILDDTASEVENFNSAYIALVECISAHNHRADNYQTEYQQMKNRLLSHIRALSAGFISNHDVQLRELSEASRGD ERAHQVLTDRLQVLYGQKRSLDAQIINCSNTVDNINFGLEALGINGFKIVIHDAAQDSYRLERPDKESDEGIFATLSEGE KTLIAFLYFLETCEGRTSRDEHDVREKLIVIDDPISSLSQNYIFEIASLIQQRVIKSHIAAKVIILTHSLFFFQEMLLSA QGKKDGNGLPLGWLLYRVSKSTHSVASFISGNALLNDYQAMWYVLKESSDEQVASVVIPNTMRQILEYYFGFSGKHARLS VTLEKLASERGEPGFRAFARYINRHSHADARNIKLLETASVAHYLAWFERVFVAVEDLEHYELMMGRNGT
Specific function: Unknown
COG id: COG4694
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 79970; Mature: 79970
Theoretical pI: Translated: 5.13; Mature: 5.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFDFSNPVTMIYGQNGTGKSTISGYFYRPNHTDFAGCTFIPSLDMRTLVFSQEYVTDIFS CCCCCCCEEEEECCCCCCCCCCCEEEECCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHC TPFQPGVFSLSEENTTVREEIAALDDGISRLSVEIQTNKSEHQKKTEMVTRVKEQCENAI CCCCCCCEEECCCCHHHHHHHHHHHCCHHHEEEEEECCCHHHHHHHHHHHHHHHHHHHHH KGCVAEIKKTALWDLMEGAKQGPRLYQTIISHTDTINTSTAELEAAFRQLLSSQGNHLSP HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCH LAELTMLILTKEDADLLAQVLVPSGDSRLAAAIAQLGNAEWVAAGNVWLIEDVCPFCQNI HHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHCCCCCEEEECCEEEHHHHHHHHHHH VDADHLRKEIASLFDRSWEDKMARLEAISSQIRSWLDNADLWKLQVQSYPLIDATDTVQL HCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHH TLTTLIQKWSKNLRLVESKISAPSELVILDDTASEVENFNSAYIALVECISAHNHRADNY HHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHCCCHHHHHHHHHHHHCCCCCCCH QTEYQQMKNRLLSHIRALSAGFISNHDVQLRELSEASRGDERAHQVLTDRLQVLYGQKRS HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCC LDAQIINCSNTVDNINFGLEALGINGFKIVIHDAAQDSYRLERPDKESDEGIFATLSEGE CCEEEEECCCCCCCCCCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCC KTLIAFLYFLETCEGRTSRDEHDVREKLIVIDDPISSLSQNYIFEIASLIQQRVIKSHIA HHHHHHHHHHHHHCCCCCCCHHHHHHCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHH AKVIILTHSLFFFQEMLLSAQGKKDGNGLPLGWLLYRVSKSTHSVASFISGNALLNDYQA HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH MWYVLKESSDEQVASVVIPNTMRQILEYYFGFSGKHARLSVTLEKLASERGEPGFRAFAR HHHHHHCCCCHHHHHHCCCHHHHHHHHHHCCCCCCCEEEEEEHHHHHHCCCCCHHHHHHH YINRHSHADARNIKLLETASVAHYLAWFERVFVAVEDLEHYELMMGRNGT HHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MFDFSNPVTMIYGQNGTGKSTISGYFYRPNHTDFAGCTFIPSLDMRTLVFSQEYVTDIFS CCCCCCCEEEEECCCCCCCCCCCEEEECCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHC TPFQPGVFSLSEENTTVREEIAALDDGISRLSVEIQTNKSEHQKKTEMVTRVKEQCENAI CCCCCCCEEECCCCHHHHHHHHHHHCCHHHEEEEEECCCHHHHHHHHHHHHHHHHHHHHH KGCVAEIKKTALWDLMEGAKQGPRLYQTIISHTDTINTSTAELEAAFRQLLSSQGNHLSP HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCH LAELTMLILTKEDADLLAQVLVPSGDSRLAAAIAQLGNAEWVAAGNVWLIEDVCPFCQNI HHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHCCCCCEEEECCEEEHHHHHHHHHHH VDADHLRKEIASLFDRSWEDKMARLEAISSQIRSWLDNADLWKLQVQSYPLIDATDTVQL HCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHH TLTTLIQKWSKNLRLVESKISAPSELVILDDTASEVENFNSAYIALVECISAHNHRADNY HHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHCCCHHHHHHHHHHHHCCCCCCCH QTEYQQMKNRLLSHIRALSAGFISNHDVQLRELSEASRGDERAHQVLTDRLQVLYGQKRS HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCC LDAQIINCSNTVDNINFGLEALGINGFKIVIHDAAQDSYRLERPDKESDEGIFATLSEGE CCEEEEECCCCCCCCCCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCC KTLIAFLYFLETCEGRTSRDEHDVREKLIVIDDPISSLSQNYIFEIASLIQQRVIKSHIA HHHHHHHHHHHHHCCCCCCCHHHHHHCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHH AKVIILTHSLFFFQEMLLSAQGKKDGNGLPLGWLLYRVSKSTHSVASFISGNALLNDYQA HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH MWYVLKESSDEQVASVVIPNTMRQILEYYFGFSGKHARLSVTLEKLASERGEPGFRAFAR HHHHHHCCCCHHHHHHCCCHHHHHHHHHHCCCCCCCEEEEEEHHHHHHCCCCCHHHHHHH YINRHSHADARNIKLLETASVAHYLAWFERVFVAVEDLEHYELMMGRNGT HHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA