| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is 153948305
Identifier: 153948305
GI number: 153948305
Start: 4188747
End: 4189121
Strand: Reverse
Name: 153948305
Synonym: YpsIP31758_3710
Alternate gene names: NA
Gene position: 4189121-4188747 (Counterclockwise)
Preceding gene: 153948689
Following gene: 153947855
Centisome position: 88.69
GC content: 52.53
Gene sequence:
>375_bases ATGGCCGTCATTGAGTTTCTTCCCGATCGCTTGAATGCGCCACCTGTTATTTGGCGTGGGTTCACTTCCGGTGAATTCCT TCTGGCGGCTTGTTGTGGTTGTTTACTGGGTATCCCGGTCTCTATTCCATTCGCTTTCATCCCCGCACTGGGTTGGATAG CTATCCCAACAGGCATGTTGATTATGCCTATTCTGGTTGTTTTTATTGGTGGCCGATGGGTCAGTCAATATAAGCGAGGC AAACCGGATAATTACCTCTGGCGGCGCTTGGAGGAGGTGCGTGTGCGGCTTGGATGGGCACAAAACCTCATTATTATCAG CCGGGCATGGGCGCTGCGGCGTTCGCATCCATTCCAACGAGGGTGTGCCGAATGA
Upstream 100 bases:
>100_bases CTGGACCGAATTTGGCACTTTCGTCATTGTCGGTGTGCTGTTGCTGGTTGTGACTATCTGGCTGGTGACTAAAGCCAGTA CCATCCTGTAAGGAGAGGGT
Downstream 100 bases:
>100_bases GCCGTTTTCGCCATGCTGTTAGCGCCCGAGATAATCATATTTCCTCGCTTCGTCTATTCTGCATCATGTTCTTTATTGGC ATGGTGGCCAGCAGCATTGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 124; Mature: 123
Protein sequence:
>124_residues MAVIEFLPDRLNAPPVIWRGFTSGEFLLAACCGCLLGIPVSIPFAFIPALGWIAIPTGMLIMPILVVFIGGRWVSQYKRG KPDNYLWRRLEEVRVRLGWAQNLIIISRAWALRRSHPFQRGCAE
Sequences:
>Translated_124_residues MAVIEFLPDRLNAPPVIWRGFTSGEFLLAACCGCLLGIPVSIPFAFIPALGWIAIPTGMLIMPILVVFIGGRWVSQYKRG KPDNYLWRRLEEVRVRLGWAQNLIIISRAWALRRSHPFQRGCAE >Mature_123_residues AVIEFLPDRLNAPPVIWRGFTSGEFLLAACCGCLLGIPVSIPFAFIPALGWIAIPTGMLIMPILVVFIGGRWVSQYKRGK PDNYLWRRLEEVRVRLGWAQNLIIISRAWALRRSHPFQRGCAE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14035; Mature: 13904
Theoretical pI: Translated: 10.43; Mature: 10.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 3.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVIEFLPDRLNAPPVIWRGFTSGEFLLAACCGCLLGIPVSIPFAFIPALGWIAIPTGML CCHHHHCHHHCCCCCEEEECCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH IMPILVVFIGGRWVSQYKRGKPDNYLWRRLEEVRVRLGWAQNLIIISRAWALRRSHPFQR HHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCC GCAE CCCC >Mature Secondary Structure AVIEFLPDRLNAPPVIWRGFTSGEFLLAACCGCLLGIPVSIPFAFIPALGWIAIPTGML CHHHHCHHHCCCCCEEEECCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH IMPILVVFIGGRWVSQYKRGKPDNYLWRRLEEVRVRLGWAQNLIIISRAWALRRSHPFQR HHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCC GCAE CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA