Definition Yersinia pseudotuberculosis IP 31758, complete genome.
Accession NC_009708
Length 4,723,306

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The map label for this gene is ycjY [H]

Identifier: 153948257

GI number: 153948257

Start: 2392640

End: 2393629

Strand: Reverse

Name: ycjY [H]

Synonym: YpsIP31758_2082

Alternate gene names: 153948257

Gene position: 2393629-2392640 (Counterclockwise)

Preceding gene: 153947688

Following gene: 153948680

Centisome position: 50.68

GC content: 48.08

Gene sequence:

>990_bases
ATGTCAGCCGATTATAAATTAAATCCATTTACACTGACTTATGACGGCGCGATTACCGAAAACGTGAAAGGCAAAGTCAA
TATTCATCCTGTTACTTATAAGCTAAATGGTTTGGAAATTTCTGCCAACGTATATACCCCTGCGAATTATGATCCCGCTA
AAAAATACCCGGCCGTGGTGGTGGCTCACCCCAATGGTGGCGTGAAAGAGCAGGTCGCTGGCTTGTATGCTCAGCGTTTG
GCAGAGCAAGGCTATATCACCATTACTGCGGATGCCGCGTATCAAGGCGCGAGTGGCGGCTTGCCCCGCAATGTCGACAA
ACCCGCTTACCGCATTGAAGATATTCACGGCATGGCAGACTTTATTACCCAATATCCTGGGGTGGACACGGTCCGTTTAG
GCCTGCTGGGTATTTGCGGCGGTGGGGGCTACTCCTTGAAAGCCGGGCAAACCGACAAGCGCTTCAGCGCGATTGCCACG
TTGAGCATGTTTGATTCCGGTCTGGTAAGACGCAACGGTTATCAGGACTCACAACTTTCCACAATACAAGAACGTTTAAA
ACAAGCCTCTGATGCACGAGCACAGGAAGCTGCTGGTGGAGAGGTTACTTACGTTGGGGATGCCAAACTGACTGATGAGC
AAATTGCCAAACTGCCGTTTGACCTTTATCGGCAGGGTTTTGAGTACTACGGTAAAACGCATGCTCACCCCAATTCAACC
TTCAGATACACCGCCAGCAGTCTGCTCGACTTAATGAGATTCGATGCGGCAAGCAATATGGATTTAATCGATAAACCGCT
ACTGATGATGGCAGGCAGTAAAGCCGATTCCCTGTATATGAGCGAAACAGCGTTTAAAGGTGCTAGCAACGCAAAAGATA
AGGAACTGTTCCTGATTGATGGTGCGACCCACATTGAAACCTATTGGCAGCCGGAATATGTGAATCAGGCTATAGGTAAA
TTGGCTCAGTTCTACGGGAAAAATTTATAA

Upstream 100 bases:

>100_bases
GAAACACAATGCTTTTAAAATGACATCCGTTTTTAAAACGACATCGGTTTTTAAATCTACCTTGTTAGCGGCAGTGATCA
GTCTTTCATCTGGGGGAGCA

Downstream 100 bases:

>100_bases
AAGAGAAACGGATACTCCCTCTCTTTTCGTCTGTGCCAACACTGGCGGATATTGCGGATAGAGAGCGGTATTTGTCAGCC
ATACCTGATGTCACAGTCAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 329; Mature: 328

Protein sequence:

>329_residues
MSADYKLNPFTLTYDGAITENVKGKVNIHPVTYKLNGLEISANVYTPANYDPAKKYPAVVVAHPNGGVKEQVAGLYAQRL
AEQGYITITADAAYQGASGGLPRNVDKPAYRIEDIHGMADFITQYPGVDTVRLGLLGICGGGGYSLKAGQTDKRFSAIAT
LSMFDSGLVRRNGYQDSQLSTIQERLKQASDARAQEAAGGEVTYVGDAKLTDEQIAKLPFDLYRQGFEYYGKTHAHPNST
FRYTASSLLDLMRFDAASNMDLIDKPLLMMAGSKADSLYMSETAFKGASNAKDKELFLIDGATHIETYWQPEYVNQAIGK
LAQFYGKNL

Sequences:

>Translated_329_residues
MSADYKLNPFTLTYDGAITENVKGKVNIHPVTYKLNGLEISANVYTPANYDPAKKYPAVVVAHPNGGVKEQVAGLYAQRL
AEQGYITITADAAYQGASGGLPRNVDKPAYRIEDIHGMADFITQYPGVDTVRLGLLGICGGGGYSLKAGQTDKRFSAIAT
LSMFDSGLVRRNGYQDSQLSTIQERLKQASDARAQEAAGGEVTYVGDAKLTDEQIAKLPFDLYRQGFEYYGKTHAHPNST
FRYTASSLLDLMRFDAASNMDLIDKPLLMMAGSKADSLYMSETAFKGASNAKDKELFLIDGATHIETYWQPEYVNQAIGK
LAQFYGKNL
>Mature_328_residues
SADYKLNPFTLTYDGAITENVKGKVNIHPVTYKLNGLEISANVYTPANYDPAKKYPAVVVAHPNGGVKEQVAGLYAQRLA
EQGYITITADAAYQGASGGLPRNVDKPAYRIEDIHGMADFITQYPGVDTVRLGLLGICGGGGYSLKAGQTDKRFSAIATL
SMFDSGLVRRNGYQDSQLSTIQERLKQASDARAQEAAGGEVTYVGDAKLTDEQIAKLPFDLYRQGFEYYGKTHAHPNSTF
RYTASSLLDLMRFDAASNMDLIDKPLLMMAGSKADSLYMSETAFKGASNAKDKELFLIDGATHIETYWQPEYVNQAIGKL
AQFYGKNL

Specific function: Unknown

COG id: COG1073

COG function: function code R; Hydrolases of the alpha/beta superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI221142683, Length=295, Percent_Identity=36.6101694915254, Blast_Score=192, Evalue=3e-50,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002925 [H]

Pfam domain/function: PF01738 DLH [H]

EC number: NA

Molecular weight: Translated: 35942; Mature: 35811

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSADYKLNPFTLTYDGAITENVKGKVNIHPVTYKLNGLEISANVYTPANYDPAKKYPAVV
CCCCCCCCCEEEEECCCCCCCCCCEEEEEEEEEEECCEEEEEEEECCCCCCCCCCCCEEE
VAHPNGGVKEQVAGLYAQRLAEQGYITITADAAYQGASGGLPRNVDKPAYRIEDIHGMAD
EECCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
FITQYPGVDTVRLGLLGICGGGGYSLKAGQTDKRFSAIATLSMFDSGLVRRNGYQDSQLS
HHHHCCCCCEEEEEEEEEECCCCCEECCCCCCHHHHHHHHHHHHHCCHHHCCCCCCHHHH
TIQERLKQASDARAQEAAGGEVTYVGDAKLTDEQIAKLPFDLYRQGFEYYGKTHAHPNST
HHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHCCHHHHHHHHHHCCCCCCCCCCC
FRYTASSLLDLMRFDAASNMDLIDKPLLMMAGSKADSLYMSETAFKGASNAKDKELFLID
EEECHHHHHHHHHHCCCCCCCHHCCCHHEEECCCCCCEEEHHHHHCCCCCCCCCEEEEEE
GATHIETYWQPEYVNQAIGKLAQFYGKNL
CCHHHHCCCCHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SADYKLNPFTLTYDGAITENVKGKVNIHPVTYKLNGLEISANVYTPANYDPAKKYPAVV
CCCCCCCCEEEEECCCCCCCCCCEEEEEEEEEEECCEEEEEEEECCCCCCCCCCCCEEE
VAHPNGGVKEQVAGLYAQRLAEQGYITITADAAYQGASGGLPRNVDKPAYRIEDIHGMAD
EECCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
FITQYPGVDTVRLGLLGICGGGGYSLKAGQTDKRFSAIATLSMFDSGLVRRNGYQDSQLS
HHHHCCCCCEEEEEEEEEECCCCCEECCCCCCHHHHHHHHHHHHHCCHHHCCCCCCHHHH
TIQERLKQASDARAQEAAGGEVTYVGDAKLTDEQIAKLPFDLYRQGFEYYGKTHAHPNST
HHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHCCHHHHHHHHHHCCCCCCCCCCC
FRYTASSLLDLMRFDAASNMDLIDKPLLMMAGSKADSLYMSETAFKGASNAKDKELFLID
EEECHHHHHHHHHHCCCCCCCHHCCCHHEEECCCCCCEEEHHHHHCCCCCCCCCEEEEEE
GATHIETYWQPEYVNQAIGKLAQFYGKNL
CCHHHHCCCCHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]