| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is 153948198
Identifier: 153948198
GI number: 153948198
Start: 1708769
End: 1709962
Strand: Direct
Name: 153948198
Synonym: YpsIP31758_1467
Alternate gene names: NA
Gene position: 1708769-1709962 (Clockwise)
Preceding gene: 153947863
Following gene: 153950239
Centisome position: 36.18
GC content: 35.43
Gene sequence:
>1194_bases ATGTGGGTTTTACCTATAAATTCTAATCCGACTGTTTTACATCCACCAATGGTGGATAGAGTTTATATCGATCGACAGAT CGATGAATTGGAACTTTATTTTTGTCCTGATACCGGAAAATGTAAAAAATTGACTACTGAAATGAGAGTCCGCAATGAAA TATATAAAAATCTGGATTATTTTTATTACTTTTTGGAAAAATCATACACTAGTGTCGCGCTGAGTTTGCTGATTGTAGAA CAGGCGTGGACAAATACACATCAACCCGTTTCACGTGGAAACATCAAACCAGAATATAGGCTTGATGACTACCGTAGAGA ATCGCTTTGTGAATTTGCTATCAGAGAGATACTGAAAACAGTAGATGAAGCAATAATATCGCAACCCAGTACAACCGATA GTTTTACTAAAAAAAAGAACAAAAAGGCATATGAAGATATTATCTCAATGGTTTCGTATTTAGTAGGGTTGACTAAAGAT AAAATACAGGGAGCAAAGCAACGCTATGGTTCAGACCCTATAACGCAAGTTTTATTTCAGGAATTTAACAAAAGAAATAT ATTTCATGACTATAGCGGCAATGAACAGGATGTATTAAAAGAAGCTATGAATGGGATCGTTTATTCATGTTATAAATTCT ATAGTGAGAAAGAAAAATTACCTAGTGTAGACGTAATAAAAAAAATTATGAAAGAGGTGCCGCAGAGTATTAATTATCCG GATTCTGAGACTGCCGCCTATCGCCTTATCTCTAAAATTATCATTGACCCTATTATTATGGGTGTTAATTATGAAAAACA TTATCATCTTTTGCATTTAAATGCGTTGGCCAAAACGCTAATTGCAAAAGATATTCCTGATTCCCATAACCATAAATATA AACATTATCTCGACGATAATTTAAATAATAATAAATTTATCCGCTTATTTTTTTTGGATAAAACCTTCGATATCCGCAAA AGTGAACTTTATCAGCGAGTCGAGCAACATTTACGGGAGATCAATGAAAACATCTCTGCGGATGATATTCTCCGGTGCTG CAAAGATTATTATGAATTTGCCCGTGAAAAGTATGCGCTGAAAATACCTTCTTTGGCTGAAGTTGAGTTTACGGAACAAC TCACGCGCAGCGGCCATATCTCAGCAGCAATAGAACATCGGCGTCATGGTACGTATCTGCCCCGAACAGTATGA
Upstream 100 bases:
>100_bases AGATTAGGGTTAACCATGGATATCTGTCAGTAGGCTTGATAGTTAGAATATTTAATTAACTGTTCAGTCTCTCGCTTTAT CTGATTTAGGGATCATCGTC
Downstream 100 bases:
>100_bases TCGGTGACTTAAGTTGTGTTAATGAAGAATAGCGGGTTGTGTCTGACGGCGAGACGGAGCCAATAAGGGGTTATTGGCAA GGTGCCCACGACGGAGAGTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 397; Mature: 397
Protein sequence:
>397_residues MWVLPINSNPTVLHPPMVDRVYIDRQIDELELYFCPDTGKCKKLTTEMRVRNEIYKNLDYFYYFLEKSYTSVALSLLIVE QAWTNTHQPVSRGNIKPEYRLDDYRRESLCEFAIREILKTVDEAIISQPSTTDSFTKKKNKKAYEDIISMVSYLVGLTKD KIQGAKQRYGSDPITQVLFQEFNKRNIFHDYSGNEQDVLKEAMNGIVYSCYKFYSEKEKLPSVDVIKKIMKEVPQSINYP DSETAAYRLISKIIIDPIIMGVNYEKHYHLLHLNALAKTLIAKDIPDSHNHKYKHYLDDNLNNNKFIRLFFLDKTFDIRK SELYQRVEQHLREINENISADDILRCCKDYYEFAREKYALKIPSLAEVEFTEQLTRSGHISAAIEHRRHGTYLPRTV
Sequences:
>Translated_397_residues MWVLPINSNPTVLHPPMVDRVYIDRQIDELELYFCPDTGKCKKLTTEMRVRNEIYKNLDYFYYFLEKSYTSVALSLLIVE QAWTNTHQPVSRGNIKPEYRLDDYRRESLCEFAIREILKTVDEAIISQPSTTDSFTKKKNKKAYEDIISMVSYLVGLTKD KIQGAKQRYGSDPITQVLFQEFNKRNIFHDYSGNEQDVLKEAMNGIVYSCYKFYSEKEKLPSVDVIKKIMKEVPQSINYP DSETAAYRLISKIIIDPIIMGVNYEKHYHLLHLNALAKTLIAKDIPDSHNHKYKHYLDDNLNNNKFIRLFFLDKTFDIRK SELYQRVEQHLREINENISADDILRCCKDYYEFAREKYALKIPSLAEVEFTEQLTRSGHISAAIEHRRHGTYLPRTV >Mature_397_residues MWVLPINSNPTVLHPPMVDRVYIDRQIDELELYFCPDTGKCKKLTTEMRVRNEIYKNLDYFYYFLEKSYTSVALSLLIVE QAWTNTHQPVSRGNIKPEYRLDDYRRESLCEFAIREILKTVDEAIISQPSTTDSFTKKKNKKAYEDIISMVSYLVGLTKD KIQGAKQRYGSDPITQVLFQEFNKRNIFHDYSGNEQDVLKEAMNGIVYSCYKFYSEKEKLPSVDVIKKIMKEVPQSINYP DSETAAYRLISKIIIDPIIMGVNYEKHYHLLHLNALAKTLIAKDIPDSHNHKYKHYLDDNLNNNKFIRLFFLDKTFDIRK SELYQRVEQHLREINENISADDILRCCKDYYEFAREKYALKIPSLAEVEFTEQLTRSGHISAAIEHRRHGTYLPRTV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46780; Mature: 46780
Theoretical pI: Translated: 7.88; Mature: 7.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWVLPINSNPTVLHPPMVDRVYIDRQIDELELYFCPDTGKCKKLTTEMRVRNEIYKNLDY CEEEEECCCCCEECCCCHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH FYYFLEKSYTSVALSLLIVEQAWTNTHQPVSRGNIKPEYRLDDYRRESLCEFAIREILKT HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH VDEAIISQPSTTDSFTKKKNKKAYEDIISMVSYLVGLTKDKIQGAKQRYGSDPITQVLFQ HHHHHHCCCCCCHHHHHHHCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHH EFNKRNIFHDYSGNEQDVLKEAMNGIVYSCYKFYSEKEKLPSVDVIKKIMKEVPQSINYP HHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCC DSETAAYRLISKIIIDPIIMGVNYEKHYHLLHLNALAKTLIAKDIPDSHNHKYKHYLDDN CCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHCCCCCCCCCHHHHHCCC LNNNKFIRLFFLDKTFDIRKSELYQRVEQHLREINENISADDILRCCKDYYEFAREKYAL CCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHEE KIPSLAEVEFTEQLTRSGHISAAIEHRRHGTYLPRTV ECCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MWVLPINSNPTVLHPPMVDRVYIDRQIDELELYFCPDTGKCKKLTTEMRVRNEIYKNLDY CEEEEECCCCCEECCCCHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH FYYFLEKSYTSVALSLLIVEQAWTNTHQPVSRGNIKPEYRLDDYRRESLCEFAIREILKT HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH VDEAIISQPSTTDSFTKKKNKKAYEDIISMVSYLVGLTKDKIQGAKQRYGSDPITQVLFQ HHHHHHCCCCCCHHHHHHHCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHH EFNKRNIFHDYSGNEQDVLKEAMNGIVYSCYKFYSEKEKLPSVDVIKKIMKEVPQSINYP HHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCC DSETAAYRLISKIIIDPIIMGVNYEKHYHLLHLNALAKTLIAKDIPDSHNHKYKHYLDDN CCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHCCCCCCCCCHHHHHCCC LNNNKFIRLFFLDKTFDIRKSELYQRVEQHLREINENISADDILRCCKDYYEFAREKYAL CCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHEE KIPSLAEVEFTEQLTRSGHISAAIEHRRHGTYLPRTV ECCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA