| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is yceG [H]
Identifier: 153948177
GI number: 153948177
Start: 1839441
End: 1840466
Strand: Direct
Name: yceG [H]
Synonym: YpsIP31758_1582
Alternate gene names: 153948177
Gene position: 1839441-1840466 (Clockwise)
Preceding gene: 153949696
Following gene: 153946978
Centisome position: 38.94
GC content: 46.3
Gene sequence:
>1026_bases ATGAAAAGAAAAAGCACCAAAGTATTGATCCTTTTTGTTGTGATCTGTTTGGGATTACTGCTGTTGGGTTATCAAAAAGT ACAAGATTTTGCGCGTCAGCCCTTGGCGATTAAGCAAGAGACTTACTTTACCTTACCGGCAGGTACCGGGCGGGTTGCTC TAGAGAATTTATTGCTACGTGATCATGTGATTGCTAATACAGGTTTATTTCCCTGGCTACTGCGCATAGAACCCGAACTG GCTAATTTTAAGGCTGGGACATATCGTTTTACGCCGGGTATGACGGTACGTGAGATGCTGGAGTTATTGGTCAGTGGTAA AGAAGCCCAGTTTACCGTTCGTTTTATTGAAGGTAAGCGCCTGCGTGATTGGCTGGATGAGTTACAGCAGTCAAAATATG TCAAACATGTGCTGGAAGGGAAAACAGATGCCGAAATTGCGCAGTTACTGGGGTTAAAAGAGAGTGAACACCCCGAAGGC TGGCTCTATCCTGATACCTACTCCTATACCGCAGGTACAACGGATTTAACACTGCTCAAACGTGCTCATCAACGAATGGA GAAAACCGTTGCAGAAATCTGGCAGGGGCGTGATGACGCATTGCCATATAAGACCCCAAGTGATTTGGTTACTATGGCGT CAATCATTGAAAAAGAAACCGCAGTAAATGAGGAGCGGACTAAGGTGGCTTCTGTCTTTATTAACCGTTTACGTCTGGGT ATGCGCCTACAAACGGATCCAACAGTGATTTATGGTATGGGTGAGAAGTACAGCGGTAACATTACTCGTAAAGACTTAGA TACCCCGACGCCTTATAATACCTATGTTATTTCCGGTTTGCCGCCAACCCCCATTGCCATGCCGGGATTGGCATCGCTGA CCGCTGCTGCCCATCCGGCCCAAACGCCTTATCTCTATTTTGTCGCAGACGGCAAGGGCGGGCATACATTCACCACCAAT TTAGCCAGTCATAATCAAGCCGTGCGTGTTTATCGCCAGTCGCTAAAGGATAAAAATGAACAGTAA
Upstream 100 bases:
>100_bases TGCATAGATATAATTAATTGTTATATAATCACGCTTGTTTTTAGAACACCGCCACATTCAATTTAAAACCGCCACATTCA AATTTAAAAATGGCCACCCG
Downstream 100 bases:
>100_bases ATTTATCGTTATTGAAGGGCTTGAAGGAGCAGGGAAAACCACAGCTCGAGACACTGTGGTCGCGGTGCTGCGTGCCCAAG GGATTAACGATATCGTTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 341; Mature: 341
Protein sequence:
>341_residues MKRKSTKVLILFVVICLGLLLLGYQKVQDFARQPLAIKQETYFTLPAGTGRVALENLLLRDHVIANTGLFPWLLRIEPEL ANFKAGTYRFTPGMTVREMLELLVSGKEAQFTVRFIEGKRLRDWLDELQQSKYVKHVLEGKTDAEIAQLLGLKESEHPEG WLYPDTYSYTAGTTDLTLLKRAHQRMEKTVAEIWQGRDDALPYKTPSDLVTMASIIEKETAVNEERTKVASVFINRLRLG MRLQTDPTVIYGMGEKYSGNITRKDLDTPTPYNTYVISGLPPTPIAMPGLASLTAAAHPAQTPYLYFVADGKGGHTFTTN LASHNQAVRVYRQSLKDKNEQ
Sequences:
>Translated_341_residues MKRKSTKVLILFVVICLGLLLLGYQKVQDFARQPLAIKQETYFTLPAGTGRVALENLLLRDHVIANTGLFPWLLRIEPEL ANFKAGTYRFTPGMTVREMLELLVSGKEAQFTVRFIEGKRLRDWLDELQQSKYVKHVLEGKTDAEIAQLLGLKESEHPEG WLYPDTYSYTAGTTDLTLLKRAHQRMEKTVAEIWQGRDDALPYKTPSDLVTMASIIEKETAVNEERTKVASVFINRLRLG MRLQTDPTVIYGMGEKYSGNITRKDLDTPTPYNTYVISGLPPTPIAMPGLASLTAAAHPAQTPYLYFVADGKGGHTFTTN LASHNQAVRVYRQSLKDKNEQ >Mature_341_residues MKRKSTKVLILFVVICLGLLLLGYQKVQDFARQPLAIKQETYFTLPAGTGRVALENLLLRDHVIANTGLFPWLLRIEPEL ANFKAGTYRFTPGMTVREMLELLVSGKEAQFTVRFIEGKRLRDWLDELQQSKYVKHVLEGKTDAEIAQLLGLKESEHPEG WLYPDTYSYTAGTTDLTLLKRAHQRMEKTVAEIWQGRDDALPYKTPSDLVTMASIIEKETAVNEERTKVASVFINRLRLG MRLQTDPTVIYGMGEKYSGNITRKDLDTPTPYNTYVISGLPPTPIAMPGLASLTAAAHPAQTPYLYFVADGKGGHTFTTN LASHNQAVRVYRQSLKDKNEQ
Specific function: Unknown
COG id: COG1559
COG function: function code R; Predicted periplasmic solute-binding protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0755 family [H]
Homologues:
Organism=Escherichia coli, GI1787339, Length=320, Percent_Identity=64.0625, Blast_Score=417, Evalue=1e-118,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003770 [H]
Pfam domain/function: PF02618 ADC_lyase [H]
EC number: NA
Molecular weight: Translated: 38437; Mature: 38437
Theoretical pI: Translated: 9.39; Mature: 9.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRKSTKVLILFVVICLGLLLLGYQKVQDFARQPLAIKQETYFTLPAGTGRVALENLLLR CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCEEEEECCCCCHHHHHHHHHH DHVIANTGLFPWLLRIEPELANFKAGTYRFTPGMTVREMLELLVSGKEAQFTVRFIEGKR HHHHHCCCCCCEEEEECCHHHCCCCCCEEECCCCCHHHHHHHHHCCCCCEEEEEEECCCH LRDWLDELQQSKYVKHVLEGKTDAEIAQLLGLKESEHPEGWLYPDTYSYTAGTTDLTLLK HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH RAHQRMEKTVAEIWQGRDDALPYKTPSDLVTMASIIEKETAVNEERTKVASVFINRLRLG HHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHC MRLQTDPTVIYGMGEKYSGNITRKDLDTPTPYNTYVISGLPPTPIAMPGLASLTAAAHPA EEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHCCCC QTPYLYFVADGKGGHTFTTNLASHNQAVRVYRQSLKDKNEQ CCCEEEEEEECCCCCEEEECHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MKRKSTKVLILFVVICLGLLLLGYQKVQDFARQPLAIKQETYFTLPAGTGRVALENLLLR CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCEEEEECCCCCHHHHHHHHHH DHVIANTGLFPWLLRIEPELANFKAGTYRFTPGMTVREMLELLVSGKEAQFTVRFIEGKR HHHHHCCCCCCEEEEECCHHHCCCCCCEEECCCCCHHHHHHHHHCCCCCEEEEEEECCCH LRDWLDELQQSKYVKHVLEGKTDAEIAQLLGLKESEHPEGWLYPDTYSYTAGTTDLTLLK HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH RAHQRMEKTVAEIWQGRDDALPYKTPSDLVTMASIIEKETAVNEERTKVASVFINRLRLG HHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHC MRLQTDPTVIYGMGEKYSGNITRKDLDTPTPYNTYVISGLPPTPIAMPGLASLTAAAHPA EEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHCCCC QTPYLYFVADGKGGHTFTTNLASHNQAVRVYRQSLKDKNEQ CCCEEEEEEECCCCCEEEECHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503; 1644759; 8631667 [H]