| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is 153948076
Identifier: 153948076
GI number: 153948076
Start: 1737907
End: 1739034
Strand: Reverse
Name: 153948076
Synonym: YpsIP31758_1496
Alternate gene names: NA
Gene position: 1739034-1737907 (Counterclockwise)
Preceding gene: 153949754
Following gene: 153948725
Centisome position: 36.82
GC content: 41.76
Gene sequence:
>1128_bases ATGAAGAAAAATTGTTTAAAACATTATCGTGCTGGGCAGCTTTTAGTGTTGGCTATCGGTTTGGCGTTTTCTGTACCCAG CGTAGCGCTAACCGATGTTGCTCAACCTCAGGAACGCTATGAAAATTATGTCACACAGCGTCAGACCGTTGATTTACTGA TCAATCAGGCACAACAAGCCTTTAAAAATCCCACTCGAATTTCAGGTGCAGGGTTTACAGGTAAATTACCCTCTAATATG GAAGTGGTTGCACAGAAGTTATTACAAGCACACCAACTCGAGCCATACCGTGTTGATCTCTTATTTAGTGCAGCAAGCGC ATATATTTATAATAACAATATTGAAAAAGCATTAGCGATTTATAAAGATATTTTAAAAGATGCGCCGGATGATATTGATG CGCTGATTTATCTCTCTGCATGGTCACGTTTTGCGGGCCAAACATCAGAAAGCCAGAGCTATTTTGCACAATTAAAACGG CTTAATCCGCTGAAAGCACAACAACTTGAACAGTTTTATGCCGTTATCGATAAAGCCGCCGCTATGCCGATTTCAGATAC CTTATCAGCACAACAGTTGGCACAGTTGAAAGCGACCCAAGGCGAAAATGCGATTGTCACCTTGGGCTATGCGTTAAATC CTGATGGTACGATGAATGATGTTCTTATTCAGCGTTTAGAAAAAACGTTAGAAATTGCTCAACAATTGCCAGATGCGTTA ATTATTGTGACGGGAGGCGTGCCGCAAAATAACCAAACCGAAGGTAAATTAATGGCCGATTGGTTAATTAAAAAAGGCAT TAAACCTGAACGTATTTATCAGGATAATTATGCACGTTCTACCGTCGAAAATGCGTTATATAGCCGTTATGCCTTGGCGA AGCATAGAATTAAAAATGCCATCATCATTAGTTCAGGAAGCCATGTTCGCCGTGCCGATGCGTTATTCACTATTGCAAGT TGGGAAAGTGGCCCCCACGATATTAATTTCCTGACCATTGCGGCCTTGGATAAGCCCTTAAGTGAATTACAGAAAACAAG CCCAGCCGATCTACAGGGTATTTATCGCGATGGCCTGAAAACACTGGGTTTATGGAGTTTCCGTAGTTACCCACTTGAGG AGCGTTAA
Upstream 100 bases:
>100_bases TTTTAAAAAACCACTTGCACCCCTGCCCGTTGCCAATAAATTTTAATGACATAATTGATACCTCTGATACAGATTATATT TTTAACATGGAGAATAAATA
Downstream 100 bases:
>100_bases TCATTACATACCCGTAGTCCTTCAAGATGCAGGGGTGCTAGCTGCCCCTGCTCACCCCATCCTATTTTCTCTCCTGTTTT TTTTAATCTCTGGGCAGAGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 375; Mature: 375
Protein sequence:
>375_residues MKKNCLKHYRAGQLLVLAIGLAFSVPSVALTDVAQPQERYENYVTQRQTVDLLINQAQQAFKNPTRISGAGFTGKLPSNM EVVAQKLLQAHQLEPYRVDLLFSAASAYIYNNNIEKALAIYKDILKDAPDDIDALIYLSAWSRFAGQTSESQSYFAQLKR LNPLKAQQLEQFYAVIDKAAAMPISDTLSAQQLAQLKATQGENAIVTLGYALNPDGTMNDVLIQRLEKTLEIAQQLPDAL IIVTGGVPQNNQTEGKLMADWLIKKGIKPERIYQDNYARSTVENALYSRYALAKHRIKNAIIISSGSHVRRADALFTIAS WESGPHDINFLTIAALDKPLSELQKTSPADLQGIYRDGLKTLGLWSFRSYPLEER
Sequences:
>Translated_375_residues MKKNCLKHYRAGQLLVLAIGLAFSVPSVALTDVAQPQERYENYVTQRQTVDLLINQAQQAFKNPTRISGAGFTGKLPSNM EVVAQKLLQAHQLEPYRVDLLFSAASAYIYNNNIEKALAIYKDILKDAPDDIDALIYLSAWSRFAGQTSESQSYFAQLKR LNPLKAQQLEQFYAVIDKAAAMPISDTLSAQQLAQLKATQGENAIVTLGYALNPDGTMNDVLIQRLEKTLEIAQQLPDAL IIVTGGVPQNNQTEGKLMADWLIKKGIKPERIYQDNYARSTVENALYSRYALAKHRIKNAIIISSGSHVRRADALFTIAS WESGPHDINFLTIAALDKPLSELQKTSPADLQGIYRDGLKTLGLWSFRSYPLEER >Mature_375_residues MKKNCLKHYRAGQLLVLAIGLAFSVPSVALTDVAQPQERYENYVTQRQTVDLLINQAQQAFKNPTRISGAGFTGKLPSNM EVVAQKLLQAHQLEPYRVDLLFSAASAYIYNNNIEKALAIYKDILKDAPDDIDALIYLSAWSRFAGQTSESQSYFAQLKR LNPLKAQQLEQFYAVIDKAAAMPISDTLSAQQLAQLKATQGENAIVTLGYALNPDGTMNDVLIQRLEKTLEIAQQLPDAL IIVTGGVPQNNQTEGKLMADWLIKKGIKPERIYQDNYARSTVENALYSRYALAKHRIKNAIIISSGSHVRRADALFTIAS WESGPHDINFLTIAALDKPLSELQKTSPADLQGIYRDGLKTLGLWSFRSYPLEER
Specific function: Unknown
COG id: COG1434
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41788; Mature: 41788
Theoretical pI: Translated: 8.98; Mature: 8.98
Prosite motif: PS50005 TPR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKNCLKHYRAGQLLVLAIGLAFSVPSVALTDVAQPQERYENYVTQRQTVDLLINQAQQA CCCHHHHHHCCCCHHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH FKNPTRISGAGFTGKLPSNMEVVAQKLLQAHQLEPYRVDLLFSAASAYIYNNNIEKALAI HCCCCEECCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEHHHHHHHHHEECCCHHHHHHH YKDILKDAPDDIDALIYLSAWSRFAGQTSESQSYFAQLKRLNPLKAQQLEQFYAVIDKAA HHHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH AMPISDTLSAQQLAQLKATQGENAIVTLGYALNPDGTMNDVLIQRLEKTLEIAQQLPDAL CCCCHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCEE IIVTGGVPQNNQTEGKLMADWLIKKGIKPERIYQDNYARSTVENALYSRYALAKHRIKNA EEEECCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCE IIISSGSHVRRADALFTIASWESGPHDINFLTIAALDKPLSELQKTSPADLQGIYRDGLK EEEECCCCCCHHHHEEEEECCCCCCCCCEEEEEEHHHHHHHHHHCCCCHHHHHHHHHHHH TLGLWSFRSYPLEER HHCCHHHCCCCCCCC >Mature Secondary Structure MKKNCLKHYRAGQLLVLAIGLAFSVPSVALTDVAQPQERYENYVTQRQTVDLLINQAQQA CCCHHHHHHCCCCHHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH FKNPTRISGAGFTGKLPSNMEVVAQKLLQAHQLEPYRVDLLFSAASAYIYNNNIEKALAI HCCCCEECCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEHHHHHHHHHEECCCHHHHHHH YKDILKDAPDDIDALIYLSAWSRFAGQTSESQSYFAQLKRLNPLKAQQLEQFYAVIDKAA HHHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH AMPISDTLSAQQLAQLKATQGENAIVTLGYALNPDGTMNDVLIQRLEKTLEIAQQLPDAL CCCCHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCEE IIVTGGVPQNNQTEGKLMADWLIKKGIKPERIYQDNYARSTVENALYSRYALAKHRIKNA EEEECCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCE IIISSGSHVRRADALFTIASWESGPHDINFLTIAALDKPLSELQKTSPADLQGIYRDGLK EEEECCCCCCHHHHEEEEECCCCCCCCCEEEEEEHHHHHHHHHHCCCCHHHHHHHHHHHH TLGLWSFRSYPLEER HHCCHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA