| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is 153948073
Identifier: 153948073
GI number: 153948073
Start: 4190571
End: 4191458
Strand: Reverse
Name: 153948073
Synonym: YpsIP31758_3714
Alternate gene names: NA
Gene position: 4191458-4190571 (Counterclockwise)
Preceding gene: 153949528
Following gene: 153947204
Centisome position: 88.74
GC content: 32.43
Gene sequence:
>888_bases ATGGAATTAAATAATGAAATTTTAGTATTGCCAGAAATTCTATCTGCATCCGGTTTTTCTTTGGAAACACATTTGTTTCG CTATCGTAATGATAATTTAATTAGAAACGATGATGGGAGTTTTGAATATGGATATGGTGCTCGTGAGTTACTTGAAAGTA TTATCTGGCACTCTTGTGTTGGCGCTCTTAATGATCCATTCGAAGTTTATTTCCAACAAAATAAAAACGAACTGTATGAG TTAACTGATGAGGAGCTTTTCTTTTATTGGTCAAATTCACTGGAGAAAAATAAATTTGAACAAAAAATAATGAGTGATTT TTTTAGTGATAATAAGGATGACATTAGAAGTCAATTAACAAGTAATATTGGTTCATATATTCATATATTCAAAGAGATTT TCAGAAAACATGCGGCGATTGCCTGTTTTACAACGTGTTGTGATAGCCGCCTTATGTGGGGGTATTATTGTTCAGGGTTA AAGGGTTTTTGCTTGATTTATAACACTGAACGAATTAATAGAATATTGCCGCAAGTAAGTAAAGTAATATACTCTAAAGA AAGGCCGACCCTTGGAGTTATGTCTTATTTTATAAGGAAAATGCGAGGTGAGAGCGTTTTTGCTATTGAAAGCTTTGCCA AGTATAAACATGAAGAATGGAGTCATGAGAACGAATATCGCAGTTTTTTGATGTTAGATGATGAGAATGATATTGTTTCT GGAGGTGTTTCTGTTCAACTTAACGAGTCGTGTATTGATGGTGTGATTATTGGTGAAGAATGTAATGAACAAACTAAAAG AGCCATAATTGGATATTCTAAAGATAAAGGAATAAAGGTATTTCATGCCAGTGCAGATTTAGATATATTTAGAGTTTATA TTTCATGA
Upstream 100 bases:
>100_bases TGGCACGGTTGGGTAAACTAAATTTTCACTCATGGTGGGTAATAATGTGATTAGCTTATACCGTTAACATAGTAAAAATG ATGTCATGGAAAAGGTTATT
Downstream 100 bases:
>100_bases TTGCTAATTTCTGTAGATCCTTCATACTTAAAATTGCATGTGAATTTACTACATTAAATAATCCTGATTAATTGTGTAGT AAGTTCATTGGGGTTGTTTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 295; Mature: 295
Protein sequence:
>295_residues MELNNEILVLPEILSASGFSLETHLFRYRNDNLIRNDDGSFEYGYGARELLESIIWHSCVGALNDPFEVYFQQNKNELYE LTDEELFFYWSNSLEKNKFEQKIMSDFFSDNKDDIRSQLTSNIGSYIHIFKEIFRKHAAIACFTTCCDSRLMWGYYCSGL KGFCLIYNTERINRILPQVSKVIYSKERPTLGVMSYFIRKMRGESVFAIESFAKYKHEEWSHENEYRSFLMLDDENDIVS GGVSVQLNESCIDGVIIGEECNEQTKRAIIGYSKDKGIKVFHASADLDIFRVYIS
Sequences:
>Translated_295_residues MELNNEILVLPEILSASGFSLETHLFRYRNDNLIRNDDGSFEYGYGARELLESIIWHSCVGALNDPFEVYFQQNKNELYE LTDEELFFYWSNSLEKNKFEQKIMSDFFSDNKDDIRSQLTSNIGSYIHIFKEIFRKHAAIACFTTCCDSRLMWGYYCSGL KGFCLIYNTERINRILPQVSKVIYSKERPTLGVMSYFIRKMRGESVFAIESFAKYKHEEWSHENEYRSFLMLDDENDIVS GGVSVQLNESCIDGVIIGEECNEQTKRAIIGYSKDKGIKVFHASADLDIFRVYIS >Mature_295_residues MELNNEILVLPEILSASGFSLETHLFRYRNDNLIRNDDGSFEYGYGARELLESIIWHSCVGALNDPFEVYFQQNKNELYE LTDEELFFYWSNSLEKNKFEQKIMSDFFSDNKDDIRSQLTSNIGSYIHIFKEIFRKHAAIACFTTCCDSRLMWGYYCSGL KGFCLIYNTERINRILPQVSKVIYSKERPTLGVMSYFIRKMRGESVFAIESFAKYKHEEWSHENEYRSFLMLDDENDIVS GGVSVQLNESCIDGVIIGEECNEQTKRAIIGYSKDKGIKVFHASADLDIFRVYIS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34381; Mature: 34381
Theoretical pI: Translated: 4.84; Mature: 4.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELNNEILVLPEILSASGFSLETHLFRYRNDNLIRNDDGSFEYGYGARELLESIIWHSCV CCCCCCEEEEEHHHCCCCCCHHHHHHEECCCCEEECCCCCEECCCCHHHHHHHHHHHHHH GALNDPFEVYFQQNKNELYELTDEELFFYWSNSLEKNKFEQKIMSDFFSDNKDDIRSQLT HCCCCHHHHHEECCCCHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCHHHHHHHHH SNIGSYIHIFKEIFRKHAAIACFTTCCDSRLMWGYYCSGLKGFCLIYNTERINRILPQVS HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCEEEEECHHHHHHHHHHHH KVIYSKERPTLGVMSYFIRKMRGESVFAIESFAKYKHEEWSHENEYRSFLMLDDENDIVS HHHHCCCCCCHHHHHHHHHHHCCCCEEEHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEE GGVSVQLNESCIDGVIIGEECNEQTKRAIIGYSKDKGIKVFHASADLDIFRVYIS CCEEEEECCCCCCCEEECCHHCHHHHHHHCCCCCCCCEEEEEECCCCEEEEEEEC >Mature Secondary Structure MELNNEILVLPEILSASGFSLETHLFRYRNDNLIRNDDGSFEYGYGARELLESIIWHSCV CCCCCCEEEEEHHHCCCCCCHHHHHHEECCCCEEECCCCCEECCCCHHHHHHHHHHHHHH GALNDPFEVYFQQNKNELYELTDEELFFYWSNSLEKNKFEQKIMSDFFSDNKDDIRSQLT HCCCCHHHHHEECCCCHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCHHHHHHHHH SNIGSYIHIFKEIFRKHAAIACFTTCCDSRLMWGYYCSGLKGFCLIYNTERINRILPQVS HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCEEEEECHHHHHHHHHHHH KVIYSKERPTLGVMSYFIRKMRGESVFAIESFAKYKHEEWSHENEYRSFLMLDDENDIVS HHHHCCCCCCHHHHHHHHHHHCCCCEEEHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEE GGVSVQLNESCIDGVIIGEECNEQTKRAIIGYSKDKGIKVFHASADLDIFRVYIS CCEEEEECCCCCCCEEECCHHCHHHHHHHCCCCCCCCEEEEEECCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA