Click here to switch to the map view.

The map label for this gene is yebR [H]

Identifier: 153948057

GI number: 153948057

Start: 1940598

End: 1941095

Strand: Direct

Name: yebR [H]

Synonym: YpsIP31758_1670

Alternate gene names: 153948057

Gene position: 1940598-1941095 (Clockwise)

Preceding gene: 153950580

Following gene: 153949113

Centisome position: 41.09

GC content: 45.18

Gene sequence:

>498_bases
ATGAAAAAAACAGAATTCTACGCGGAATTAAAACGTGACTTATGTGCCTTAGTTGCAGGTGAAACGAATTTTATTGCCAC
ACTGGCCAATGCCAGTGCCTTGCTTTATGAACGCCTTGATGGCTTGAATTGGGCTGGTTTCTACTTGGTCGATGGCAAAC
AACTTGTACTCGGGCCTTTTCAGGGAAAGATTGCATGTGTGCGTATTCCGGTAGGAAAAGGGGTGTGTGGAACCGCAGTA
GCAGAAAACCGCGTTCAGCGGGTAGGTAATGTGCATGCTTTCCCCGGTCATATTGCCTGTGATGCAGCAAGTAACGCTGA
AATTGTGCTGCCAATCACTGTAAAGGGGAAAGTTATCGGCATTTTGGATATTGATAGCATTGTTTATGATCGCTTTGATG
AAGACGACGAATTGGGTTTAATCTCAGTTGTGGCGGGGCTTTGCGAGCATCTTGAGTTTTGTGATAGTGCCAAATATGTC
ACAGAGACTGCAAGTTGA

Upstream 100 bases:

>100_bases
ACAGAGGAATACCCTTGTCGCCAAGGGTATTTAATGATTATTTTATATAAGCCAAGCATTCATTGCCCTTGGCTATTCTT
TGGTTTCTAACGGTCATCAC

Downstream 100 bases:

>100_bases
TATACGGATAACGTGGCAATTGCTGATGGCGTCATTATAATGACGCCTGTTCATGCCTGCGCTGGTTGGCAAACCCGTTG
TAATCAGGAAATTTCATGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 165; Mature: 165

Protein sequence:

>165_residues
MKKTEFYAELKRDLCALVAGETNFIATLANASALLYERLDGLNWAGFYLVDGKQLVLGPFQGKIACVRIPVGKGVCGTAV
AENRVQRVGNVHAFPGHIACDAASNAEIVLPITVKGKVIGILDIDSIVYDRFDEDDELGLISVVAGLCEHLEFCDSAKYV
TETAS

Sequences:

>Translated_165_residues
MKKTEFYAELKRDLCALVAGETNFIATLANASALLYERLDGLNWAGFYLVDGKQLVLGPFQGKIACVRIPVGKGVCGTAV
AENRVQRVGNVHAFPGHIACDAASNAEIVLPITVKGKVIGILDIDSIVYDRFDEDDELGLISVVAGLCEHLEFCDSAKYV
TETAS
>Mature_165_residues
MKKTEFYAELKRDLCALVAGETNFIATLANASALLYERLDGLNWAGFYLVDGKQLVLGPFQGKIACVRIPVGKGVCGTAV
AENRVQRVGNVHAFPGHIACDAASNAEIVLPITVKGKVIGILDIDSIVYDRFDEDDELGLISVVAGLCEHLEFCDSAKYV
TETAS

Specific function: Unknown

COG id: COG1956

COG function: function code T; GAF domain-containing protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the free Met sulfoxide reductase family [H]

Homologues:

Organism=Escherichia coli, GI171474009, Length=164, Percent_Identity=65.8536585365854, Blast_Score=225, Evalue=1e-60,
Organism=Saccharomyces cerevisiae, GI6322781, Length=145, Percent_Identity=42.7586206896552, Blast_Score=123, Evalue=2e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003018
- InterPro:   IPR000614 [H]

Pfam domain/function: PF01590 GAF [H]

EC number: NA

Molecular weight: Translated: 17737; Mature: 17737

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.6 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
3.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKTEFYAELKRDLCALVAGETNFIATLANASALLYERLDGLNWAGFYLVDGKQLVLGPF
CCCHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHCCCCCCEEEEECCCEEEEECC
QGKIACVRIPVGKGVCGTAVAENRVQRVGNVHAFPGHIACDAASNAEIVLPITVKGKVIG
CCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCEEEECCCCCCEEEEEEEECCEEEE
ILDIDSIVYDRFDEDDELGLISVVAGLCEHLEFCDSAKYVTETAS
EEEHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEECCC
>Mature Secondary Structure
MKKTEFYAELKRDLCALVAGETNFIATLANASALLYERLDGLNWAGFYLVDGKQLVLGPF
CCCHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHCCCCCCEEEEECCCEEEEECC
QGKIACVRIPVGKGVCGTAVAENRVQRVGNVHAFPGHIACDAASNAEIVLPITVKGKVIG
CCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCEEEECCCCCCEEEEEEEECCEEEE
ILDIDSIVYDRFDEDDELGLISVVAGLCEHLEFCDSAKYVTETAS
EEEHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503; 10493123 [H]