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The map label for this gene is yadE [H]

Identifier: 153948007

GI number: 153948007

Start: 3762106

End: 3763359

Strand: Reverse

Name: yadE [H]

Synonym: YpsIP31758_3346

Alternate gene names: 153948007

Gene position: 3763359-3762106 (Counterclockwise)

Preceding gene: 153947102

Following gene: 153949164

Centisome position: 79.68

GC content: 43.54

Gene sequence:

>1254_bases
ATGATACCGACAACCCAGGCTGACCTCTTGCCAAATGTGGAGGTCACACCACCAAAATATATGATGACCGAACGCGATAG
CGAAGTTTATTCGTTGGTTGGTGAACATGTTATTCCCGTCGGAGAAATCAAAGAAGGCCAGTTGATTCAGGTGACGCCAG
TTATTGCTGAATACTATGAGTTTAAGTTTGGCAACGGTACCGGTTTTATTGATAAAGATGATTTACGTGAGATTAATAAA
GCACAAAAAAACAACGACATGTTGGGCGATTTAAATAAGCCCCTACCGAATCAAAATATACTGACGATGCGTGAGGCTAA
GGTTTATTTGGCTGCGGATGTGCGCAGTGAACAATTTGCTGTTCTGGCCGAGAACTTACGTTATCCCATTGTTGGAAAAC
TGAAAGATCGTTTAAGCAATACTTGGTATCAGGTCAATATTGGTGATCGCTTGGGGTATGTCAGCAGCGCAGACGCTGAA
ATAGACAACGGTATTCCGATCCTGACTTACCATCACATGTTGAAGAACGAAGAAAATAAACGCTTCCTGAACACATCAAC
CACCACATCTGATGTGGCGTTCAGTAATCAAATGGCTTACCTCAAACAGGCGGGCTATGACACCATTTCTCTGTATCAGC
TCGAAGGCTATCTTAATAACAAGATTAATCTGCCTGCGAAAGTTGTGGTGCTGACATTTGATGATGGTTTGAAGTCAGTG
AGTCGCTATGCTTATCCTATTCTGAAAGAGAATGGTTTCCGCGCCACGGCGTTTATTATCTCTTCGCGTATTAAACGGCA
TCCACAAAAATGGAATCCAGATTCATTACAGTTTATGAGTATTGCTGAACTGAAAGGAATTCAAGATGTGTTTGATATAC
AGTCTCATACGCATTTTTTACACCGCACCGATAATAGACACCATCCTATATTATTGAGTCGCTCTTATCACAATATCATT
TTTGATTTTGAACGCTCACGTCGGGCATTAGCGCAGTTCAATCCGCATGTGATTTTTCTGTCATATCCCTTCGGGGGTTT
TAATCAAACAGCGGTCAATGCGGCGAAGAATGCCGGTTTTCATTTGGCGGTGACCACGATGCAAGGCAAGGTCAAGCCAG
GCGATAATCCATATACCCTGAAACGGCTCTATATTCTCCGTACTGACTCAATACCGACCATGGCGGAGCGCATAGCCAAT
CAACCCGGCTCGGTTGCGGTAAAACCGGCACCCGCAGTGATTGAAATGGATTAA

Upstream 100 bases:

>100_bases
TTTTTCCATTCAGCGCCGACTGCGCATAAGTAGAACAAACATGTGGCATAAAAACAGAATAGCTATTGGGATGCTACTCA
GCATTGTCATGTGGGTAATA

Downstream 100 bases:

>100_bases
CGATGTTATGGCATAAAAAGGAAGGGTGTTTTATTTAAGCGCCCGAGGTTAATCGCATTATTATGGCTATCTAGCCAGTG
ATCCGGGGGAGCGAACATCG

Product: polysaccharide deacetylase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 417; Mature: 417

Protein sequence:

>417_residues
MIPTTQADLLPNVEVTPPKYMMTERDSEVYSLVGEHVIPVGEIKEGQLIQVTPVIAEYYEFKFGNGTGFIDKDDLREINK
AQKNNDMLGDLNKPLPNQNILTMREAKVYLAADVRSEQFAVLAENLRYPIVGKLKDRLSNTWYQVNIGDRLGYVSSADAE
IDNGIPILTYHHMLKNEENKRFLNTSTTTSDVAFSNQMAYLKQAGYDTISLYQLEGYLNNKINLPAKVVVLTFDDGLKSV
SRYAYPILKENGFRATAFIISSRIKRHPQKWNPDSLQFMSIAELKGIQDVFDIQSHTHFLHRTDNRHHPILLSRSYHNII
FDFERSRRALAQFNPHVIFLSYPFGGFNQTAVNAAKNAGFHLAVTTMQGKVKPGDNPYTLKRLYILRTDSIPTMAERIAN
QPGSVAVKPAPAVIEMD

Sequences:

>Translated_417_residues
MIPTTQADLLPNVEVTPPKYMMTERDSEVYSLVGEHVIPVGEIKEGQLIQVTPVIAEYYEFKFGNGTGFIDKDDLREINK
AQKNNDMLGDLNKPLPNQNILTMREAKVYLAADVRSEQFAVLAENLRYPIVGKLKDRLSNTWYQVNIGDRLGYVSSADAE
IDNGIPILTYHHMLKNEENKRFLNTSTTTSDVAFSNQMAYLKQAGYDTISLYQLEGYLNNKINLPAKVVVLTFDDGLKSV
SRYAYPILKENGFRATAFIISSRIKRHPQKWNPDSLQFMSIAELKGIQDVFDIQSHTHFLHRTDNRHHPILLSRSYHNII
FDFERSRRALAQFNPHVIFLSYPFGGFNQTAVNAAKNAGFHLAVTTMQGKVKPGDNPYTLKRLYILRTDSIPTMAERIAN
QPGSVAVKPAPAVIEMD
>Mature_417_residues
MIPTTQADLLPNVEVTPPKYMMTERDSEVYSLVGEHVIPVGEIKEGQLIQVTPVIAEYYEFKFGNGTGFIDKDDLREINK
AQKNNDMLGDLNKPLPNQNILTMREAKVYLAADVRSEQFAVLAENLRYPIVGKLKDRLSNTWYQVNIGDRLGYVSSADAE
IDNGIPILTYHHMLKNEENKRFLNTSTTTSDVAFSNQMAYLKQAGYDTISLYQLEGYLNNKINLPAKVVVLTFDDGLKSV
SRYAYPILKENGFRATAFIISSRIKRHPQKWNPDSLQFMSIAELKGIQDVFDIQSHTHFLHRTDNRHHPILLSRSYHNII
FDFERSRRALAQFNPHVIFLSYPFGGFNQTAVNAAKNAGFHLAVTTMQGKVKPGDNPYTLKRLYILRTDSIPTMAERIAN
QPGSVAVKPAPAVIEMD

Specific function: Unknown

COG id: COG0726

COG function: function code G; Predicted xylanase/chitin deacetylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786322, Length=386, Percent_Identity=65.2849740932643, Blast_Score=539, Evalue=1e-154,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011330
- InterPro:   IPR002509 [H]

Pfam domain/function: PF01522 Polysacc_deac_1 [H]

EC number: NA

Molecular weight: Translated: 47259; Mature: 47259

Theoretical pI: Translated: 8.54; Mature: 8.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIPTTQADLLPNVEVTPPKYMMTERDSEVYSLVGEHVIPVGEIKEGQLIQVTPVIAEYYE
CCCCCCHHCCCCCCCCCCCCEECCCCHHHHHHHHHCCCCCCCCCCCCEEEEEHHHHHHHE
FKFGNGTGFIDKDDLREINKAQKNNDMLGDLNKPLPNQNILTMREAKVYLAADVRSEQFA
EEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECEEEEEECCCCCHHH
VLAENLRYPIVGKLKDRLSNTWYQVNIGDRLGYVSSADAEIDNGIPILTYHHMLKNEENK
HHHHCCCCCCHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEEHHHHCCCCCC
RFLNTSTTTSDVAFSNQMAYLKQAGYDTISLYQLEGYLNNKINLPAKVVVLTFDDGLKSV
EEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCEEEEEEEECCHHHHH
SRYAYPILKENGFRATAFIISSRIKRHPQKWNPDSLQFMSIAELKGIQDVFDIQSHTHFL
HHHHCHHHHCCCCEEHHHHHHHHHHHCCCCCCCCCEEEEEHHHHCCHHHHHHHHHHHHHH
HRTDNRHHPILLSRSYHNIIFDFERSRRALAQFNPHVIFLSYPFGGFNQTAVNAAKNAGF
HCCCCCCCCEEEECCCCCEEEEEHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHCCCE
HLAVTTMQGKVKPGDNPYTLKRLYILRTDSIPTMAERIANQPGSVAVKPAPAVIEMD
EEEEEEEECEECCCCCCEEEEEEEEEEECCCHHHHHHHCCCCCCEEECCCCEEEEEC
>Mature Secondary Structure
MIPTTQADLLPNVEVTPPKYMMTERDSEVYSLVGEHVIPVGEIKEGQLIQVTPVIAEYYE
CCCCCCHHCCCCCCCCCCCCEECCCCHHHHHHHHHCCCCCCCCCCCCEEEEEHHHHHHHE
FKFGNGTGFIDKDDLREINKAQKNNDMLGDLNKPLPNQNILTMREAKVYLAADVRSEQFA
EEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECEEEEEECCCCCHHH
VLAENLRYPIVGKLKDRLSNTWYQVNIGDRLGYVSSADAEIDNGIPILTYHHMLKNEENK
HHHHCCCCCCHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEEHHHHCCCCCC
RFLNTSTTTSDVAFSNQMAYLKQAGYDTISLYQLEGYLNNKINLPAKVVVLTFDDGLKSV
EEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCEEEEEEEECCHHHHH
SRYAYPILKENGFRATAFIISSRIKRHPQKWNPDSLQFMSIAELKGIQDVFDIQSHTHFL
HHHHCHHHHCCCCEEHHHHHHHHHHHCCCCCCCCCEEEEEHHHHCCHHHHHHHHHHHHHH
HRTDNRHHPILLSRSYHNIIFDFERSRRALAQFNPHVIFLSYPFGGFNQTAVNAAKNAGF
HCCCCCCCCEEEECCCCCEEEEEHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHCCCE
HLAVTTMQGKVKPGDNPYTLKRLYILRTDSIPTMAERIANQPGSVAVKPAPAVIEMD
EEEEEEEECEECCCCCCEEEEEEEEEEECCCHHHHHHHCCCCCCEEECCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8202364; 9278503 [H]