| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is yfiQ [H]
Identifier: 153947999
GI number: 153947999
Start: 3607774
End: 3610416
Strand: Direct
Name: yfiQ [H]
Synonym: YpsIP31758_3206
Alternate gene names: 153947999
Gene position: 3607774-3610416 (Clockwise)
Preceding gene: 153950611
Following gene: 153949689
Centisome position: 76.38
GC content: 52.18
Gene sequence:
>2643_bases ATGAGCCAACGTGGATTAGAAGCACTGTTACGTCCGAAATCTATCGCAGTGATCGGTGCTTCTGAAAAACCTGAGCGAGC GGGTTTTCTGATGATGCGCAACTTGCTGGATGGCGGTTTCAATGGACCGATTCTCCCGGTAACGCCCAATCACAAAGCGG TGTGCGGTGTCTTGGCTTACGCCAATATCGCCAGCCTACCCATCACTCCTGATTTAGCGATTTTGTGCACCCATGATTGC CGTAATCTGACGCTACTGGAAGACCTTGGGAACCGGGGCTGTAAAGCCGCCATTATTTTGTCTGCTGCACCGGAGCAGTT CCCAGAACTGAAAGCCTGCGCTCAACGCCACCATATGCGGCTACTCGGGCCTAATAGCCTGGGGCTACTGGCCCCGTGGC AAGGGCTGAATGCCAGCTTTTCACCCGTCCCCATCAAAAAAGGGCGGCTGGCGTTTATCTCCCAGTCTGCAGCCGTGGCC AATACGATCCTTGATTGGGCGCAGCAACGGGAAGTTGGCTTTTCTTACTTTATTGCACTGGGCGACAGCTTGGATATTGA TGTCGATGACCTACTCGATTTCCTTGCCCGAGACAGCAAAACCAGCGCGATTATGCTGTATATCGAACATATCAGCGATG CACGCCGCTTCTTATCCGCTTCCCGCAGTGCTTCACGCAATAAACCGGTTTTGGTGGTGAAAAGTGGCCGCAGTCAGCGC GCTCAACAGCTCTTGAATGGTCAGCAAGGATTGGATGCCGCCTATGATGCCGCTATCCAGCGGGCCGGGTTGCTGCGAGT ACAGGATACCCATGAATTGTTCTCTGCCGTTGAGACTCTCAGCCATATGCGCCCACTGCGCGGTGAACGGCTGTTGATTG TCAGCAATGGTTCAGCACCGGCGGCGATGGCGCTGGATGAACTTATCCGCCGTAATGGTAAATTGGCGACCTTGTCGGAT GCCACGCAATCCGCACTGAGTGAAGCGTTGCCGCCTTTTGTTGCGCTACGTAACCCAATAGACCTACGGGATGATGCCAG TGCTGAGCGCTATTTAGCGGCACTCAAGCCGCTATTGGACAGTAGTGATTACGATACGCTGCTCCTGATCCACTCGCCCA GCGCCGCCGCACCGGGAGGCAAAACGGCTGAATTATTGATTTCAGCTATTCGCCAACATCCGCGCGGTAAACGCATCACG TTACTCACCAATTGGTGTGGTGAATATTCATCACAAGATGCCCGTCGCTTGTTTACTGAAGCGGGTATTCCAACCTATCG CACCCCGGAAGGCGCGATCACGGCTTTTATGCATATGGTGGAGTATCGTCGTAATCAGAAACAACTGAAAGAGACCCCGG CATTACCAATAGGTTTGACCGCCAATACTGCCCATGTCCATCAGCTAATTCGCCAGGCCTTGGCCGAAGGGGCAACCCAG CTTGATACCCATGAAGTGCAACCCATTCTTGAAGCGTATGGCCTCAGGACATTGCCAACCTGGATTGCCAGCGACAGTGT AGAAGCCGTACATATTGCTGAACGACTGGGCTATCCGGTCGCAATTAAACTTCGCTCGCCTGATATCCCGCATAAATCGG AAGTTCAGGGGGTCATGTTGTATTTGCGCACCGCCATTGAAGTGCAGCGGGCGGCAGACGATATCCTCGATCGGGTAAAG CGGACCTATCCACAAGCACGAATTCATGGTTTGCTGGTGCAAAGCATGGCGAATCGAGCAGGAGCACAAGAATTGCGTAT TGCTGTGGAGCAAGATGCTATTTTCGGCCCGTTGATCATGTTAGGTGAAGGCGGTATTGAGTGGCACCACGAGACACAAG CCGCCGTCGCACTACCGCCTCTCAATATGGTGCTGGCGCGCTACCTGATTATACAGGCCGTCAAAGGGGGGAAAATTCGC AGCCGCGGATCACTACAACCTTTGGATATTCCAGGGCTAAGCCGCTTGCTGGTACAAGTTTCCAACTTGATCCTCGACTG CCCCGAAATCACCCGTCTGGATATTCACCCGGTACTGGCCTCCGGCAGTGAGTTCACGCTGCTGGATGTGTCGATGCAAT TAGCCCCTGTCACTGGTGACCCTCAAGCTCGTCTGGCAATTCGCCCGTATCCGCATGAATTGGAAGAAAAGGTCACGCTC AGAGACAACTCCCAGTGCTTATTCCGCCCGATTCTGCCGGAAGATGAGCCACTGCTAAAACTGTTTATTGATCAAGTAAC TAAAGAAGACCTTTATTATCGCTACTTCAGTGAAATCAATGAATTCAGCCATGATGATTTGGCGAATATGACACAAATTG ACTATGATCGGGAAATGGCTTTTGTTGCTGTGCGTCAAAATAGTGAAGGGCCAGAGATCATAGGTGTCACGCGGGCATTT TCTGATCCTGACAACATTGATGCCGAATTTGCCGTACTGGTCCGCTCGGATCTAAAAGGGCTGGGCTTAGGCAGGGCATT ACTTGAGAAGATGATCCGTTATGCCCGTAGCCATGGGCTATCCCGGCTCACCGCAGTCACCATGCCAAATAACCGCGGTA TGATTGGTTTGGCACAAAAACTCGGTTTTACTATTGATGTGCAAATAGAAGATGGGATCGTAAATCTGGAGCTGACACTT TGA
Upstream 100 bases:
>100_bases CGGAAAACCTCATCACCCAGTGGGGCGAGTCACAGCAAGCCACGAAGAAAACGCGTAAAGTCAGAGAAGCTATCCTTATA TCAACAACAGGAACCTGCAC
Downstream 100 bases:
>100_bases TCTTTGTTACACCAATCAGCGTGATATAGGCCACAGAGCTAAGTGATTCAGCCATTGGCAGGCAAAACTTGCGCACAATC CAGAAAAGTAATGGTATTAT
Product: acyl-CoA synthetase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 880; Mature: 879
Protein sequence:
>880_residues MSQRGLEALLRPKSIAVIGASEKPERAGFLMMRNLLDGGFNGPILPVTPNHKAVCGVLAYANIASLPITPDLAILCTHDC RNLTLLEDLGNRGCKAAIILSAAPEQFPELKACAQRHHMRLLGPNSLGLLAPWQGLNASFSPVPIKKGRLAFISQSAAVA NTILDWAQQREVGFSYFIALGDSLDIDVDDLLDFLARDSKTSAIMLYIEHISDARRFLSASRSASRNKPVLVVKSGRSQR AQQLLNGQQGLDAAYDAAIQRAGLLRVQDTHELFSAVETLSHMRPLRGERLLIVSNGSAPAAMALDELIRRNGKLATLSD ATQSALSEALPPFVALRNPIDLRDDASAERYLAALKPLLDSSDYDTLLLIHSPSAAAPGGKTAELLISAIRQHPRGKRIT LLTNWCGEYSSQDARRLFTEAGIPTYRTPEGAITAFMHMVEYRRNQKQLKETPALPIGLTANTAHVHQLIRQALAEGATQ LDTHEVQPILEAYGLRTLPTWIASDSVEAVHIAERLGYPVAIKLRSPDIPHKSEVQGVMLYLRTAIEVQRAADDILDRVK RTYPQARIHGLLVQSMANRAGAQELRIAVEQDAIFGPLIMLGEGGIEWHHETQAAVALPPLNMVLARYLIIQAVKGGKIR SRGSLQPLDIPGLSRLLVQVSNLILDCPEITRLDIHPVLASGSEFTLLDVSMQLAPVTGDPQARLAIRPYPHELEEKVTL RDNSQCLFRPILPEDEPLLKLFIDQVTKEDLYYRYFSEINEFSHDDLANMTQIDYDREMAFVAVRQNSEGPEIIGVTRAF SDPDNIDAEFAVLVRSDLKGLGLGRALLEKMIRYARSHGLSRLTAVTMPNNRGMIGLAQKLGFTIDVQIEDGIVNLELTL
Sequences:
>Translated_880_residues MSQRGLEALLRPKSIAVIGASEKPERAGFLMMRNLLDGGFNGPILPVTPNHKAVCGVLAYANIASLPITPDLAILCTHDC RNLTLLEDLGNRGCKAAIILSAAPEQFPELKACAQRHHMRLLGPNSLGLLAPWQGLNASFSPVPIKKGRLAFISQSAAVA NTILDWAQQREVGFSYFIALGDSLDIDVDDLLDFLARDSKTSAIMLYIEHISDARRFLSASRSASRNKPVLVVKSGRSQR AQQLLNGQQGLDAAYDAAIQRAGLLRVQDTHELFSAVETLSHMRPLRGERLLIVSNGSAPAAMALDELIRRNGKLATLSD ATQSALSEALPPFVALRNPIDLRDDASAERYLAALKPLLDSSDYDTLLLIHSPSAAAPGGKTAELLISAIRQHPRGKRIT LLTNWCGEYSSQDARRLFTEAGIPTYRTPEGAITAFMHMVEYRRNQKQLKETPALPIGLTANTAHVHQLIRQALAEGATQ LDTHEVQPILEAYGLRTLPTWIASDSVEAVHIAERLGYPVAIKLRSPDIPHKSEVQGVMLYLRTAIEVQRAADDILDRVK RTYPQARIHGLLVQSMANRAGAQELRIAVEQDAIFGPLIMLGEGGIEWHHETQAAVALPPLNMVLARYLIIQAVKGGKIR SRGSLQPLDIPGLSRLLVQVSNLILDCPEITRLDIHPVLASGSEFTLLDVSMQLAPVTGDPQARLAIRPYPHELEEKVTL RDNSQCLFRPILPEDEPLLKLFIDQVTKEDLYYRYFSEINEFSHDDLANMTQIDYDREMAFVAVRQNSEGPEIIGVTRAF SDPDNIDAEFAVLVRSDLKGLGLGRALLEKMIRYARSHGLSRLTAVTMPNNRGMIGLAQKLGFTIDVQIEDGIVNLELTL >Mature_879_residues SQRGLEALLRPKSIAVIGASEKPERAGFLMMRNLLDGGFNGPILPVTPNHKAVCGVLAYANIASLPITPDLAILCTHDCR NLTLLEDLGNRGCKAAIILSAAPEQFPELKACAQRHHMRLLGPNSLGLLAPWQGLNASFSPVPIKKGRLAFISQSAAVAN TILDWAQQREVGFSYFIALGDSLDIDVDDLLDFLARDSKTSAIMLYIEHISDARRFLSASRSASRNKPVLVVKSGRSQRA QQLLNGQQGLDAAYDAAIQRAGLLRVQDTHELFSAVETLSHMRPLRGERLLIVSNGSAPAAMALDELIRRNGKLATLSDA TQSALSEALPPFVALRNPIDLRDDASAERYLAALKPLLDSSDYDTLLLIHSPSAAAPGGKTAELLISAIRQHPRGKRITL LTNWCGEYSSQDARRLFTEAGIPTYRTPEGAITAFMHMVEYRRNQKQLKETPALPIGLTANTAHVHQLIRQALAEGATQL DTHEVQPILEAYGLRTLPTWIASDSVEAVHIAERLGYPVAIKLRSPDIPHKSEVQGVMLYLRTAIEVQRAADDILDRVKR TYPQARIHGLLVQSMANRAGAQELRIAVEQDAIFGPLIMLGEGGIEWHHETQAAVALPPLNMVLARYLIIQAVKGGKIRS RGSLQPLDIPGLSRLLVQVSNLILDCPEITRLDIHPVLASGSEFTLLDVSMQLAPVTGDPQARLAIRPYPHELEEKVTLR DNSQCLFRPILPEDEPLLKLFIDQVTKEDLYYRYFSEINEFSHDDLANMTQIDYDREMAFVAVRQNSEGPEIIGVTRAFS DPDNIDAEFAVLVRSDLKGLGLGRALLEKMIRYARSHGLSRLTAVTMPNNRGMIGLAQKLGFTIDVQIEDGIVNLELTL
Specific function: Unknown
COG id: COG1042
COG function: function code C; Acyl-CoA synthetase (NDP forming)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 N-acetyltransferase domain [H]
Homologues:
Organism=Escherichia coli, GI1788938, Length=880, Percent_Identity=75.4545454545455, Blast_Score=1376, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000182 - InterPro: IPR016181 - InterPro: IPR011761 - InterPro: IPR003781 - InterPro: IPR016040 - InterPro: IPR016102 [H]
Pfam domain/function: PF00583 Acetyltransf_1 [H]
EC number: NA
Molecular weight: Translated: 96771; Mature: 96640
Theoretical pI: Translated: 6.74; Mature: 6.74
Prosite motif: PS50975 ATP_GRASP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQRGLEALLRPKSIAVIGASEKPERAGFLMMRNLLDGGFNGPILPVTPNHKAVCGVLAY CCCCHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHH ANIASLPITPDLAILCTHDCRNLTLLEDLGNRGCKAAIILSAAPEQFPELKACAQRHHMR HHHCCCCCCCCEEEEEECCCCCEEHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHCCEE LLGPNSLGLLAPWQGLNASFSPVPIKKGRLAFISQSAAVANTILDWAQQREVGFSYFIAL EECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHCCCEEEEEEE GDSLDIDVDDLLDFLARDSKTSAIMLYIEHISDARRFLSASRSASRNKPVLVVKSGRSQR CCCCCCCHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHH AQQLLNGQQGLDAAYDAAIQRAGLLRVQDTHELFSAVETLSHMRPLRGERLLIVSNGSAP HHHHHCCCCCCCHHHHHHHHHCCCEEECHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCC AAMALDELIRRNGKLATLSDATQSALSEALPPFVALRNPIDLRDDASAERYLAALKPLLD HHHHHHHHHHCCCCEEEECHHHHHHHHHHCCCCEECCCCCCCCCCCCHHHHHHHHHHHHC SSDYDTLLLIHSPSAAAPGGKTAELLISAIRQHPRGKRITLLTNWCGEYSSQDARRLFTE CCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHH AGIPTYRTPEGAITAFMHMVEYRRNQKQLKETPALPIGLTANTAHVHQLIRQALAEGATQ CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHCCCHH LDTHEVQPILEAYGLRTLPTWIASDSVEAVHIAERLGYPVAIKLRSPDIPHKSEVQGVML CCHHHHHHHHHHCCCCCCCHHHCCCCCHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHH YLRTAIEVQRAADDILDRVKRTYPQARIHGLLVQSMANRAGAQELRIAVEQDAIFGPLIM HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHEEEECCCCCCCCEEE LGEGGIEWHHETQAAVALPPLNMVLARYLIIQAVKGGKIRSRGSLQPLDIPGLSRLLVQV ECCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHH SNLILDCPEITRLDIHPVLASGSEFTLLDVSMQLAPVTGDPQARLAIRPYPHELEEKVTL HHHHCCCCCCCEEECCCEECCCCCEEEEEEEEEEEECCCCCCCEEEECCCCHHHHCEEEE RDNSQCLFRPILPEDEPLLKLFIDQVTKEDLYYRYFSEINEFSHDDLANMTQIDYDREMA CCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCEE FVAVRQNSEGPEIIGVTRAFSDPDNIDAEFAVLVRSDLKGLGLGRALLEKMIRYARSHGL EEEEECCCCCCCEEEEEECCCCCCCCCCCEEEEEHHCCCCCCCCHHHHHHHHHHHHHCCC SRLTAVTMPNNRGMIGLAQKLGFTIDVQIEDGIVNLELTL CEEEEEECCCCCCCEEEHHHCCCEEEEEEECCEEEEEEEC >Mature Secondary Structure SQRGLEALLRPKSIAVIGASEKPERAGFLMMRNLLDGGFNGPILPVTPNHKAVCGVLAY CCCHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHH ANIASLPITPDLAILCTHDCRNLTLLEDLGNRGCKAAIILSAAPEQFPELKACAQRHHMR HHHCCCCCCCCEEEEEECCCCCEEHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHCCEE LLGPNSLGLLAPWQGLNASFSPVPIKKGRLAFISQSAAVANTILDWAQQREVGFSYFIAL EECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHCCCEEEEEEE GDSLDIDVDDLLDFLARDSKTSAIMLYIEHISDARRFLSASRSASRNKPVLVVKSGRSQR CCCCCCCHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHH AQQLLNGQQGLDAAYDAAIQRAGLLRVQDTHELFSAVETLSHMRPLRGERLLIVSNGSAP HHHHHCCCCCCCHHHHHHHHHCCCEEECHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCC AAMALDELIRRNGKLATLSDATQSALSEALPPFVALRNPIDLRDDASAERYLAALKPLLD HHHHHHHHHHCCCCEEEECHHHHHHHHHHCCCCEECCCCCCCCCCCCHHHHHHHHHHHHC SSDYDTLLLIHSPSAAAPGGKTAELLISAIRQHPRGKRITLLTNWCGEYSSQDARRLFTE CCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHH AGIPTYRTPEGAITAFMHMVEYRRNQKQLKETPALPIGLTANTAHVHQLIRQALAEGATQ CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHCCCHH LDTHEVQPILEAYGLRTLPTWIASDSVEAVHIAERLGYPVAIKLRSPDIPHKSEVQGVML CCHHHHHHHHHHCCCCCCCHHHCCCCCHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHH YLRTAIEVQRAADDILDRVKRTYPQARIHGLLVQSMANRAGAQELRIAVEQDAIFGPLIM HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHEEEECCCCCCCCEEE LGEGGIEWHHETQAAVALPPLNMVLARYLIIQAVKGGKIRSRGSLQPLDIPGLSRLLVQV ECCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHH SNLILDCPEITRLDIHPVLASGSEFTLLDVSMQLAPVTGDPQARLAIRPYPHELEEKVTL HHHHCCCCCCCEEECCCEECCCCCEEEEEEEEEEEECCCCCCCEEEECCCCHHHHCEEEE RDNSQCLFRPILPEDEPLLKLFIDQVTKEDLYYRYFSEINEFSHDDLANMTQIDYDREMA CCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCEE FVAVRQNSEGPEIIGVTRAFSDPDNIDAEFAVLVRSDLKGLGLGRALLEKMIRYARSHGL EEEEECCCCCCCEEEEEECCCCCCCCCCCEEEEEHHCCCCCCCCHHHHHHHHHHHHHCCC SRLTAVTMPNNRGMIGLAQKLGFTIDVQIEDGIVNLELTL CEEEEEECCCCCCCEEEHHHCCCEEEEEEECCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]