| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is 153947894
Identifier: 153947894
GI number: 153947894
Start: 2528182
End: 2529087
Strand: Direct
Name: 153947894
Synonym: YpsIP31758_2209
Alternate gene names: NA
Gene position: 2528182-2529087 (Clockwise)
Preceding gene: 153950673
Following gene: 153950316
Centisome position: 53.53
GC content: 44.59
Gene sequence:
>906_bases ATGACCACTTTAGCAAAAACTGTATCAACAAACACGCAAAGCCGTGCAATATCTGTTGATAGCTTGCCAAGCATATCGCA TAACAGTGTTCCAGTTATCACCACAGAATTGCTGGCGAATTTATATGGCACCGTACCTATTCGAATTCGTCAGAGCCACA AGCGTAACTCCGACCATTTCATTTGTGGTAAGCACTATTTCAAACTGGAAGGGAAGGAACTTGCTGATTTGCGAGTATCT TTAAGCTACTCACAAAATCTAGTCTCTCCAAAAGTTCGTGTGCTCATCCTCTGGACAGAACGCGGCGCTGCCCGTCATGC CAAAATGCTTGAAACAGATCAGGCATGGGAAGTATTCGAAAAACTGGAAGATTGCTACTTCAATGCTAAGGCAGAGGCAG TAAAACAACCTAAGCAGAAAAAATCATCATTTGATGAGCGTACGCCACTCCGTCAGTATGTTGAAAAAATGATAGCCAAC AAGTCAGGTATGAAGTACCCGGCAATCTGGAGGCTAGTTCATGACCGTTTCGACGTCGAGCACATTAACCAGTTATCAGC CAGCGAATCCCTTGAAGCCGTAGAATTTCTGAAAGTAATCGAGGGTGAATTCATCGGCAAGCAGGAAGCATTGCCAACGC CGAAAATATCCTACCCAATGTCATTTTTCGACAGCTACCGTTGGATTGTTGGCGAAAAGGCGTTGAGTGCTCCGTGGTCG TATCCAGCAAACCTACTGACTCCCGATGCTGATTACCCCAACCCATGCAGACTTCTGCTGGATGATATGAAAGAAGCTGG ATACAAAGTAGATGCTGCATTGTTCCAATTATTATCATTGCAACACCATGTTCAGATGTTGCGCAAAAAGGTTACTGCGG TAGAAAGAGTCGTTGGCTGTAACTAA
Upstream 100 bases:
>100_bases ATGCAGAAAGAAACGGAATAAAATGCCCTGAATAAACGAAGCCCCAACCGCTTGAACAGTCAGGGCCTCTAATTTGTCCG CACCGCTTAAGGAAACGAAC
Downstream 100 bases:
>100_bases AATCACACCGGCGCACGGACGCGCCAGAAAGCCGAAAGTTAACGGGCATCCTTGCCCATACTCAATCATGCTGCCGCATA CAGTAACTTCATCTGCCCTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 301; Mature: 300
Protein sequence:
>301_residues MTTLAKTVSTNTQSRAISVDSLPSISHNSVPVITTELLANLYGTVPIRIRQSHKRNSDHFICGKHYFKLEGKELADLRVS LSYSQNLVSPKVRVLILWTERGAARHAKMLETDQAWEVFEKLEDCYFNAKAEAVKQPKQKKSSFDERTPLRQYVEKMIAN KSGMKYPAIWRLVHDRFDVEHINQLSASESLEAVEFLKVIEGEFIGKQEALPTPKISYPMSFFDSYRWIVGEKALSAPWS YPANLLTPDADYPNPCRLLLDDMKEAGYKVDAALFQLLSLQHHVQMLRKKVTAVERVVGCN
Sequences:
>Translated_301_residues MTTLAKTVSTNTQSRAISVDSLPSISHNSVPVITTELLANLYGTVPIRIRQSHKRNSDHFICGKHYFKLEGKELADLRVS LSYSQNLVSPKVRVLILWTERGAARHAKMLETDQAWEVFEKLEDCYFNAKAEAVKQPKQKKSSFDERTPLRQYVEKMIAN KSGMKYPAIWRLVHDRFDVEHINQLSASESLEAVEFLKVIEGEFIGKQEALPTPKISYPMSFFDSYRWIVGEKALSAPWS YPANLLTPDADYPNPCRLLLDDMKEAGYKVDAALFQLLSLQHHVQMLRKKVTAVERVVGCN >Mature_300_residues TTLAKTVSTNTQSRAISVDSLPSISHNSVPVITTELLANLYGTVPIRIRQSHKRNSDHFICGKHYFKLEGKELADLRVSL SYSQNLVSPKVRVLILWTERGAARHAKMLETDQAWEVFEKLEDCYFNAKAEAVKQPKQKKSSFDERTPLRQYVEKMIANK SGMKYPAIWRLVHDRFDVEHINQLSASESLEAVEFLKVIEGEFIGKQEALPTPKISYPMSFFDSYRWIVGEKALSAPWSY PANLLTPDADYPNPCRLLLDDMKEAGYKVDAALFQLLSLQHHVQMLRKKVTAVERVVGCN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34317; Mature: 34186
Theoretical pI: Translated: 9.02; Mature: 9.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTLAKTVSTNTQSRAISVDSLPSISHNSVPVITTELLANLYGTVPIRIRQSHKRNSDHF CCCHHHHHCCCCCHHEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCE ICGKHYFKLEGKELADLRVSLSYSQNLVSPKVRVLILWTERGAARHAKMLETDQAWEVFE EECCEEEEECCCEEEHHEEEEHHHHCCCCCCEEEEEEECCCCCHHHHHHHCCHHHHHHHH KLEDCYFNAKAEAVKQPKQKKSSFDERTPLRQYVEKMIANKSGMKYPAIWRLVHDRFDVE HHHHHHCCCHHHHHHCHHHHHHCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCHH HINQLSASESLEAVEFLKVIEGEFIGKQEALPTPKISYPMSFFDSYRWIVGEKALSAPWS HHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCHHHHHHHHHHHCCHHHCCCCC YPANLLTPDADYPNPCRLLLDDMKEAGYKVDAALFQLLSLQHHVQMLRKKVTAVERVVGC CCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC N C >Mature Secondary Structure TTLAKTVSTNTQSRAISVDSLPSISHNSVPVITTELLANLYGTVPIRIRQSHKRNSDHF CCHHHHHCCCCCHHEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCE ICGKHYFKLEGKELADLRVSLSYSQNLVSPKVRVLILWTERGAARHAKMLETDQAWEVFE EECCEEEEECCCEEEHHEEEEHHHHCCCCCCEEEEEEECCCCCHHHHHHHCCHHHHHHHH KLEDCYFNAKAEAVKQPKQKKSSFDERTPLRQYVEKMIANKSGMKYPAIWRLVHDRFDVE HHHHHHCCCHHHHHHCHHHHHHCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCHH HINQLSASESLEAVEFLKVIEGEFIGKQEALPTPKISYPMSFFDSYRWIVGEKALSAPWS HHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCHHHHHHHHHHHCCHHHCCCCC YPANLLTPDADYPNPCRLLLDDMKEAGYKVDAALFQLLSLQHHVQMLRKKVTAVERVVGC CCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC N C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA