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The map label for this gene is 153947888

Identifier: 153947888

GI number: 153947888

Start: 381613

End: 382926

Strand: Direct

Name: 153947888

Synonym: YpsIP31758_0327

Alternate gene names: NA

Gene position: 381613-382926 (Clockwise)

Preceding gene: 153947566

Following gene: 153950765

Centisome position: 8.08

GC content: 58.14

Gene sequence:

>1314_bases
ATGAGTGACACCCCGCAACATATCATCATTAAAACCGGCACTGACCCACGGAACCGGCCGGAATTTAACGCCATTCGTGA
AGAGATCAACAAAATCAACCACCCGGCACGGCCAGAGGTCAACTGGGGTTTGATTGAATCACTGGCGCTGACCCTGTTCC
GTACCCACGGCGTGGATTTGCAGACGGCGGTGTATTACACGCTGGCCCGCACCCAAAAAAATGGCCTGGCCGGTTTCACC
GAGGGCTGCGAGTTGCTGGCCGGTATGGTGGTCGGCCAGTGGGATCACCTGTGGCCAGAACAGCCGCAGGCACGCAGTGA
AATACTGGAATGGTTCAATACCCGCGTCAGCAATCAACTGCGTCAGCATGATTTTACCCGTGACGATCTTCGGCTGGTGT
ACCGCGCTGAGCGGGCCTTGCAGTTGCTGTACGATAAATTGCAACAGGTTGAATTAAAACGGGTACCGCGCATTGAAAAC
CTGCTGTACCTGATGCAGAACACCGCCAAAAAACTCGAATCGGCCAGTGACGCGGCGAAGGCTCAGCAAACTGCGGCCCC
GCTGAAAATGCCGCCTATGGTCTATCTCTCGGTACCCGAGGCCGAGCCTGTCCGGACGGCAGCGGCAGCCCCTGAGCCTG
CGGCCAATATTGAGGTGCGTTCGCCCCCCCCGGAGACCAAACGGGGGGCGGTGCTGTGGGGCTTTGGTGCCGGTGTCCTG
TGCAGTTTACTGGTGGCGACTGCGGTTTACGTTACCCAGTTCAAACCGCTGCAACAGCAAATGACGGTGCTGGCCACCCA
ACCGGAAAGCGCGGCATTGCTGTGGCTCAACCGCCCGGATGTCGCCACCTATGGTGAGCAACTGAGCACCCTGGAAAACC
TCTCGCCCCTGTTTGTGCTCAATACCGCCGACCAGTCGGTGGCGATGGCTCGTCAACGCTGGCCGTCCGATCCCAGTCAG
GTGGCCGAAAGCCAGCGCTGGGCGCGGTTGGTGGAGGCGCGTATCGGCCTGGCCGGTACCGACAGCAGCTATTTCCAGCT
CCAGCAGCGCTTGCATGCGCTGTCTGAAAAATTACTCGAACAGGAACGTTCTCGGGGCAGTCTGACTATCTCCTATCTAA
AAACAGCAGTTTACCAGATGCAGACCGAGCTGAACCGGGAGATACCGCTGGAGGAGTTACTGCGCCAGCTGGCGGTGTCC
GCCGATGAACATCAACCGGCCTCGCCGGTCTTGATAAAACAAATTGATGACCGCTGGAACGCCTTACTCAGCCGTTATCA
CCACTTAACGCAGCAGACGAACTCTGCCCGTTAA

Upstream 100 bases:

>100_bases
TCGCATTGAAACAGATGCATTGAGGCAAATCGTATTAATCGTTGTCATCACGTCTTCCTGCTGCTTAGGCGGCAGGAGGG
CGATCAAAGGATGAGTCCGC

Downstream 100 bases:

>100_bases
CCTCCAGGAGACAGCAACGCGATGTTTGCTCATGATAAAGCTAATAATAATAAAGCCGCGGACAAGACCGGCACGGTGAC
GCCGACCCATATCGTCTCGC

Product: ImpA domain-containing protein

Products: NA

Alternate protein names: ImpA Domain-Containing Protein; OmpA/MotB Domain-Containing Protein; Type VI Secretion System Protein VasL; Type VI Secretion System Protein VasJ

Number of amino acids: Translated: 437; Mature: 436

Protein sequence:

>437_residues
MSDTPQHIIIKTGTDPRNRPEFNAIREEINKINHPARPEVNWGLIESLALTLFRTHGVDLQTAVYYTLARTQKNGLAGFT
EGCELLAGMVVGQWDHLWPEQPQARSEILEWFNTRVSNQLRQHDFTRDDLRLVYRAERALQLLYDKLQQVELKRVPRIEN
LLYLMQNTAKKLESASDAAKAQQTAAPLKMPPMVYLSVPEAEPVRTAAAAPEPAANIEVRSPPPETKRGAVLWGFGAGVL
CSLLVATAVYVTQFKPLQQQMTVLATQPESAALLWLNRPDVATYGEQLSTLENLSPLFVLNTADQSVAMARQRWPSDPSQ
VAESQRWARLVEARIGLAGTDSSYFQLQQRLHALSEKLLEQERSRGSLTISYLKTAVYQMQTELNREIPLEELLRQLAVS
ADEHQPASPVLIKQIDDRWNALLSRYHHLTQQTNSAR

Sequences:

>Translated_437_residues
MSDTPQHIIIKTGTDPRNRPEFNAIREEINKINHPARPEVNWGLIESLALTLFRTHGVDLQTAVYYTLARTQKNGLAGFT
EGCELLAGMVVGQWDHLWPEQPQARSEILEWFNTRVSNQLRQHDFTRDDLRLVYRAERALQLLYDKLQQVELKRVPRIEN
LLYLMQNTAKKLESASDAAKAQQTAAPLKMPPMVYLSVPEAEPVRTAAAAPEPAANIEVRSPPPETKRGAVLWGFGAGVL
CSLLVATAVYVTQFKPLQQQMTVLATQPESAALLWLNRPDVATYGEQLSTLENLSPLFVLNTADQSVAMARQRWPSDPSQ
VAESQRWARLVEARIGLAGTDSSYFQLQQRLHALSEKLLEQERSRGSLTISYLKTAVYQMQTELNREIPLEELLRQLAVS
ADEHQPASPVLIKQIDDRWNALLSRYHHLTQQTNSAR
>Mature_436_residues
SDTPQHIIIKTGTDPRNRPEFNAIREEINKINHPARPEVNWGLIESLALTLFRTHGVDLQTAVYYTLARTQKNGLAGFTE
GCELLAGMVVGQWDHLWPEQPQARSEILEWFNTRVSNQLRQHDFTRDDLRLVYRAERALQLLYDKLQQVELKRVPRIENL
LYLMQNTAKKLESASDAAKAQQTAAPLKMPPMVYLSVPEAEPVRTAAAAPEPAANIEVRSPPPETKRGAVLWGFGAGVLC
SLLVATAVYVTQFKPLQQQMTVLATQPESAALLWLNRPDVATYGEQLSTLENLSPLFVLNTADQSVAMARQRWPSDPSQV
AESQRWARLVEARIGLAGTDSSYFQLQQRLHALSEKLLEQERSRGSLTISYLKTAVYQMQTELNREIPLEELLRQLAVSA
DEHQPASPVLIKQIDDRWNALLSRYHHLTQQTNSAR

Specific function: Unknown

COG id: COG3515

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49381; Mature: 49250

Theoretical pI: Translated: 7.03; Mature: 7.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDTPQHIIIKTGTDPRNRPEFNAIREEINKINHPARPEVNWGLIESLALTLFRTHGVDL
CCCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCH
QTAVYYTLARTQKNGLAGFTEGCELLAGMVVGQWDHLWPEQPQARSEILEWFNTRVSNQL
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHCCCCCCHHHHHHHHHHHHHHHHHH
RQHDFTRDDLRLVYRAERALQLLYDKLQQVELKRVPRIENLLYLMQNTAKKLESASDAAK
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
AQQTAAPLKMPPMVYLSVPEAEPVRTAAAAPEPAANIEVRSPPPETKRGAVLWGFGAGVL
HHHHCCCCCCCCEEEEECCCCCCCHHHHCCCCCCCCEEECCCCCCCCCCCEEEECCHHHH
CSLLVATAVYVTQFKPLQQQMTVLATQPESAALLWLNRPDVATYGEQLSTLENLSPLFVL
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCEEEE
NTADQSVAMARQRWPSDPSQVAESQRWARLVEARIGLAGTDSSYFQLQQRLHALSEKLLE
ECCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
QERSRGSLTISYLKTAVYQMQTELNREIPLEELLRQLAVSADEHQPASPVLIKQIDDRWN
HHHCCCCEEHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH
ALLSRYHHLTQQTNSAR
HHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SDTPQHIIIKTGTDPRNRPEFNAIREEINKINHPARPEVNWGLIESLALTLFRTHGVDL
CCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCH
QTAVYYTLARTQKNGLAGFTEGCELLAGMVVGQWDHLWPEQPQARSEILEWFNTRVSNQL
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHCCCCCCHHHHHHHHHHHHHHHHHH
RQHDFTRDDLRLVYRAERALQLLYDKLQQVELKRVPRIENLLYLMQNTAKKLESASDAAK
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
AQQTAAPLKMPPMVYLSVPEAEPVRTAAAAPEPAANIEVRSPPPETKRGAVLWGFGAGVL
HHHHCCCCCCCCEEEEECCCCCCCHHHHCCCCCCCCEEECCCCCCCCCCCEEEECCHHHH
CSLLVATAVYVTQFKPLQQQMTVLATQPESAALLWLNRPDVATYGEQLSTLENLSPLFVL
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCEEEE
NTADQSVAMARQRWPSDPSQVAESQRWARLVEARIGLAGTDSSYFQLQQRLHALSEKLLE
ECCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
QERSRGSLTISYLKTAVYQMQTELNREIPLEELLRQLAVSADEHQPASPVLIKQIDDRWN
HHHCCCCEEHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH
ALLSRYHHLTQQTNSAR
HHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA