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The map label for this gene is mdcF [H]

Identifier: 153947887

GI number: 153947887

Start: 291022

End: 291978

Strand: Direct

Name: mdcF [H]

Synonym: YpsIP31758_0261

Alternate gene names: 153947887

Gene position: 291022-291978 (Clockwise)

Preceding gene: 153949562

Following gene: 153947020

Centisome position: 6.16

GC content: 53.19

Gene sequence:

>957_bases
ATGCCCGCCTTTGTTGTTTCGCTCTGGCACCAAATCGTTTTGTCTTCACCGTTATTTGTTTTGCTCGCACTGGGATATGC
TCTGGTGCGATTCGGTAAGTGGCCATCGACCATTACGGATGGTCTGACTCGCTTTGTTTTCTCCCTCGCGCTGCCTGCCA
TGCTATTTCGCATGATGTGTGACTTCTCCGAACGCCCGGCGGTTGATGCTCGCCTATTGATTGCTTTTTTTGGCAGTTGT
CTGGTGGTGTTTATCATTGGGCGGGTTATCGCCAAACGGGTGTTTCATCTGGATGGCGTTTCTGGCTCAGTCTTTGCCCT
CGGTGGGATCTTTTCCAATAACGTGATGCTAGGGCTACCTATTGCCACCATCATGCTGGGGGAGAAATCTATCCCTGCGG
TGGCCTTGGTGCTGGTATTTAACGGGCTGATCTTGTGGACGCTGGTCACCATCTCGGTAGAGTGGGCACGAAATGGTTCA
CCGACGCTGGCTGGTTTTGTGAAAACGGCTCGTAGTGTGCTGACTAACCCACTCATTATCGGGATTATTTCCGGCACCTT
ATTCAGCCTGACGGGGTTACATTTACCCGTATTTATTGACCAACCGGTCAGTATGCTAGGGCAGGTTGCACCTCCGCTCT
CATTGATTGTCTTGGGCATGGGGCTGGCAGAATACCGCGTGACCGAAGGTTGGCAGATTAGTACCGCTATCTGCTTTCTC
AAGTTGATTGTGCAGCCGATGGTGATTTGGGCGCTGGCATGGGCGATGGATCTGCCCGCGCTAGAAACTCAAGTCGTGGT
GTTGCTGGGGTCGATGGCAACGGGGGTGAATGTTTATCTGATGTCACGTCAGTTTAATGTCCTCACCGGCCCCGCGGCCG
CCAGCCTGGTGATGTCAACGGTACTGGCCGCCGTCACCACGCCACTGATTCTGACCATTATTGGGGTGGGCATATAG

Upstream 100 bases:

>100_bases
CCTTCTCCTATAAAGACCCTCAATATCCGCCATAATAAAAACAGGTCAGCCATTCTTACATTTACGGGCTGACCTGGCCC
GGCCTGACAGGAAGTAAATC

Downstream 100 bases:

>100_bases
TGTGATTAGCCAGCTAATATGAGAATCTAGCATCTGCACTTTCGATGCTAGATTTCCTCAGATGGCAGACAGCCATTCTC
AGTGTTGATCGTCACTGGTT

Product: transporter, auxin efflux carrier (AEC) family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 318; Mature: 317

Protein sequence:

>318_residues
MPAFVVSLWHQIVLSSPLFVLLALGYALVRFGKWPSTITDGLTRFVFSLALPAMLFRMMCDFSERPAVDARLLIAFFGSC
LVVFIIGRVIAKRVFHLDGVSGSVFALGGIFSNNVMLGLPIATIMLGEKSIPAVALVLVFNGLILWTLVTISVEWARNGS
PTLAGFVKTARSVLTNPLIIGIISGTLFSLTGLHLPVFIDQPVSMLGQVAPPLSLIVLGMGLAEYRVTEGWQISTAICFL
KLIVQPMVIWALAWAMDLPALETQVVVLLGSMATGVNVYLMSRQFNVLTGPAAASLVMSTVLAAVTTPLILTIIGVGI

Sequences:

>Translated_318_residues
MPAFVVSLWHQIVLSSPLFVLLALGYALVRFGKWPSTITDGLTRFVFSLALPAMLFRMMCDFSERPAVDARLLIAFFGSC
LVVFIIGRVIAKRVFHLDGVSGSVFALGGIFSNNVMLGLPIATIMLGEKSIPAVALVLVFNGLILWTLVTISVEWARNGS
PTLAGFVKTARSVLTNPLIIGIISGTLFSLTGLHLPVFIDQPVSMLGQVAPPLSLIVLGMGLAEYRVTEGWQISTAICFL
KLIVQPMVIWALAWAMDLPALETQVVVLLGSMATGVNVYLMSRQFNVLTGPAAASLVMSTVLAAVTTPLILTIIGVGI
>Mature_317_residues
PAFVVSLWHQIVLSSPLFVLLALGYALVRFGKWPSTITDGLTRFVFSLALPAMLFRMMCDFSERPAVDARLLIAFFGSCL
VVFIIGRVIAKRVFHLDGVSGSVFALGGIFSNNVMLGLPIATIMLGEKSIPAVALVLVFNGLILWTLVTISVEWARNGSP
TLAGFVKTARSVLTNPLIIGIISGTLFSLTGLHLPVFIDQPVSMLGQVAPPLSLIVLGMGLAEYRVTEGWQISTAICFLK
LIVQPMVIWALAWAMDLPALETQVVVLLGSMATGVNVYLMSRQFNVLTGPAAASLVMSTVLAAVTTPLILTIIGVGI

Specific function: Unknown

COG id: COG0679

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the auxin efflux carrier (TC 2.A.69) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004776 [H]

Pfam domain/function: PF03547 Mem_trans [H]

EC number: NA

Molecular weight: Translated: 34029; Mature: 33897

Theoretical pI: Translated: 9.30; Mature: 9.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAFVVSLWHQIVLSSPLFVLLALGYALVRFGKWPSTITDGLTRFVFSLALPAMLFRMMC
CCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
DFSERPAVDARLLIAFFGSCLVVFIIGRVIAKRVFHLDGVSGSVFALGGIFSNNVMLGLP
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCEEEECH
IATIMLGEKSIPAVALVLVFNGLILWTLVTISVEWARNGSPTLAGFVKTARSVLTNPLII
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHCCCHHH
GIISGTLFSLTGLHLPVFIDQPVSMLGQVAPPLSLIVLGMGLAEYRVTEGWQISTAICFL
HHHHHHHHHHHHCCCEEEECCHHHHHHHHCCHHHHHHHHCCHHHHCCCCCCCHHHHHHHH
KLIVQPMVIWALAWAMDLPALETQVVVLLGSMATGVNVYLMSRQFNVLTGPAAASLVMST
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEEEECCCCEEECHHHHHHHHHH
VLAAVTTPLILTIIGVGI
HHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PAFVVSLWHQIVLSSPLFVLLALGYALVRFGKWPSTITDGLTRFVFSLALPAMLFRMMC
CHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
DFSERPAVDARLLIAFFGSCLVVFIIGRVIAKRVFHLDGVSGSVFALGGIFSNNVMLGLP
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCEEEECH
IATIMLGEKSIPAVALVLVFNGLILWTLVTISVEWARNGSPTLAGFVKTARSVLTNPLII
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHCCCHHH
GIISGTLFSLTGLHLPVFIDQPVSMLGQVAPPLSLIVLGMGLAEYRVTEGWQISTAICFL
HHHHHHHHHHHHCCCEEEECCHHHHHHHHCCHHHHHHHHCCHHHHCCCCCCCHHHHHHHH
KLIVQPMVIWALAWAMDLPALETQVVVLLGSMATGVNVYLMSRQFNVLTGPAAASLVMST
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEEEECCCCEEECHHHHHHHHHH
VLAAVTTPLILTIIGVGI
HHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10858449; 11481430 [H]