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The map label for this gene is ssaK [H]

Identifier: 153947834

GI number: 153947834

Start: 4304677

End: 4305324

Strand: Reverse

Name: ssaK [H]

Synonym: YpsIP31758_3820

Alternate gene names: 153947834

Gene position: 4305324-4304677 (Counterclockwise)

Preceding gene: 153948448

Following gene: 153948139

Centisome position: 91.15

GC content: 55.25

Gene sequence:

>648_bases
GTGAACCCCTTTCACCTCGATATTGAAAAGTACGGTTATCCATTGCCGCCTGGCGTAGTTATTCCGGCGGCTTATCTGGC
AGAGGCCATGCACAGCCAGGATCTCTTGGCACAGGCCAACGCGCAAGCGGCAGAGATACTGCAAGCGGCGGAGCAGGCGC
GTGTGTTGTTGCTCGATCAAGCGGCGGAGCAGGCTGATGCACTGATCGGTCAGGCGCGTGTGCAGATGGAAACCGCACTG
CTCGCACAGCATGTTCGCTGGCTGGTGGGCGCGGAGCAATTGGAGTCGTTACTGATAACCCAAGTTCGCCACCGTATTTT
AGCCGCCATCACGTCAGTGGTAACGACCTGGAGCGGTGAACAACCGATGAGCCAGATTTTGATCCAGCGGCTGGGGGATC
AAGCAGAGAAAATGGCACAGCAAGGCGAATTAACATTACGGGTTCATCCACAGCATCTGCCAGCGGTGACCACCGCATTG
GGAGAGCGTCTGCGTTGTGTAGGGGATACGGAGATGGCCGCAGATCAGGCGCAACTCAGCTCTCCAATGCTGCAACTTAC
GCTTTCTCTCCACCACCATTTATCTCAACTGGTTCTGTGGCTACAGCAGTCGCCAGATCTTTTCGACGAAGAGAATGTTT
ATGAGTAA

Upstream 100 bases:

>100_bases
CGGTCTCCATCTTGCTCCCCCCTAACCCCCGTGCGCTATGCCTGTCACGTTCTATGCAGGCGCAAACAGAAGCCTGGTTA
AGCCGGTTGGAGCGTTTATT

Downstream 100 bases:

>100_bases
GTCAGCACTGGTGCGGGGTTTGACGATGATCACCGCGCGGCAGGATATTTTTTTAGCGGTCATGTTGCTGGTGGCGGTCT
TTATGATGATCCTGCCACTG

Product: HrpE/YscL family type III secretion apparatus protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 215; Mature: 215

Protein sequence:

>215_residues
MNPFHLDIEKYGYPLPPGVVIPAAYLAEAMHSQDLLAQANAQAAEILQAAEQARVLLLDQAAEQADALIGQARVQMETAL
LAQHVRWLVGAEQLESLLITQVRHRILAAITSVVTTWSGEQPMSQILIQRLGDQAEKMAQQGELTLRVHPQHLPAVTTAL
GERLRCVGDTEMAADQAQLSSPMLQLTLSLHHHLSQLVLWLQQSPDLFDEENVYE

Sequences:

>Translated_215_residues
MNPFHLDIEKYGYPLPPGVVIPAAYLAEAMHSQDLLAQANAQAAEILQAAEQARVLLLDQAAEQADALIGQARVQMETAL
LAQHVRWLVGAEQLESLLITQVRHRILAAITSVVTTWSGEQPMSQILIQRLGDQAEKMAQQGELTLRVHPQHLPAVTTAL
GERLRCVGDTEMAADQAQLSSPMLQLTLSLHHHLSQLVLWLQQSPDLFDEENVYE
>Mature_215_residues
MNPFHLDIEKYGYPLPPGVVIPAAYLAEAMHSQDLLAQANAQAAEILQAAEQARVLLLDQAAEQADALIGQARVQMETAL
LAQHVRWLVGAEQLESLLITQVRHRILAAITSVVTTWSGEQPMSQILIQRLGDQAEKMAQQGELTLRVHPQHLPAVTTAL
GERLRCVGDTEMAADQAQLSSPMLQLTLSLHHHLSQLVLWLQQSPDLFDEENVYE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012842 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23771; Mature: 23771

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPFHLDIEKYGYPLPPGVVIPAAYLAEAMHSQDLLAQANAQAAEILQAAEQARVLLLDQ
CCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
AAEQADALIGQARVQMETALLAQHVRWLVGAEQLESLLITQVRHRILAAITSVVTTWSGE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
QPMSQILIQRLGDQAEKMAQQGELTLRVHPQHLPAVTTALGERLRCVGDTEMAADQAQLS
CHHHHHHHHHHCHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
SPMLQLTLSLHHHLSQLVLWLQQSPDLFDEENVYE
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MNPFHLDIEKYGYPLPPGVVIPAAYLAEAMHSQDLLAQANAQAAEILQAAEQARVLLLDQ
CCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
AAEQADALIGQARVQMETALLAQHVRWLVGAEQLESLLITQVRHRILAAITSVVTTWSGE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
QPMSQILIQRLGDQAEKMAQQGELTLRVHPQHLPAVTTALGERLRCVGDTEMAADQAQLS
CHHHHHHHHHHCHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
SPMLQLTLSLHHHLSQLVLWLQQSPDLFDEENVYE
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9140973; 11677609 [H]