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The map label for this gene is 153947799

Identifier: 153947799

GI number: 153947799

Start: 60215

End: 60433

Strand: Reverse

Name: 153947799

Synonym: YpsIP31758_0052

Alternate gene names: NA

Gene position: 60433-60215 (Counterclockwise)

Preceding gene: 153948831

Following gene: 153947153

Centisome position: 1.28

GC content: 48.4

Gene sequence:

>219_bases
ATGAAAATAGAACAAGCAGCACAAGCTACCATTCCCCAATCTGGGTATATCCGGCGCTTTCGCCTTGCAGAAATGCTAGG
CGTTAGCGTTTCAACAATAGACCGCAAAGTTAAAGATGGATCGCTACCACGACCTATTAAGCTGGGCGAGAAAATCACAG
CATTCAGCGCAGTAGAGATTAATAGCTGGCTGGCAGCGCAAAGCGGGGAGGCTGCTTAA

Upstream 100 bases:

>100_bases
TAAGGGTACAGTGAGTTAACTCTCCCTTATGCTTTCATGTTTACAGAATTAATCTTGCCCGTAACGACGCATAAACCATC
AACAAAAGGTTACGGGCCAT

Downstream 100 bases:

>100_bases
TGCAAAAGAAAACCCGCGCAGAGGCGGGCATTATCGGACAGGTTAGCGCCAACGATAATACCGCTACTCATCACATTAAG
CCACCGCCGAAGAAGCACCG

Product: AlpA family protein

Products: NA

Alternate protein names: Transcriptional Regulator; Phage Transcriptional Regulator AlpA

Number of amino acids: Translated: 72; Mature: 72

Protein sequence:

>72_residues
MKIEQAAQATIPQSGYIRRFRLAEMLGVSVSTIDRKVKDGSLPRPIKLGEKITAFSAVEINSWLAAQSGEAA

Sequences:

>Translated_72_residues
MKIEQAAQATIPQSGYIRRFRLAEMLGVSVSTIDRKVKDGSLPRPIKLGEKITAFSAVEINSWLAAQSGEAA
>Mature_72_residues
MKIEQAAQATIPQSGYIRRFRLAEMLGVSVSTIDRKVKDGSLPRPIKLGEKITAFSAVEINSWLAAQSGEAA

Specific function: Unknown

COG id: COG3311

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7803; Mature: 7803

Theoretical pI: Translated: 10.36; Mature: 10.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIEQAAQATIPQSGYIRRFRLAEMLGVSVSTIDRKVKDGSLPRPIKLGEKITAFSAVEI
CCCCCCHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEC
NSWLAAQSGEAA
CCHHCCCCCCCC
>Mature Secondary Structure
MKIEQAAQATIPQSGYIRRFRLAEMLGVSVSTIDRKVKDGSLPRPIKLGEKITAFSAVEI
CCCCCCHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEC
NSWLAAQSGEAA
CCHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA