| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is eptA [H]
Identifier: 153947782
GI number: 153947782
Start: 2040892
End: 2042529
Strand: Reverse
Name: eptA [H]
Synonym: YpsIP31758_1764
Alternate gene names: 153947782
Gene position: 2042529-2040892 (Counterclockwise)
Preceding gene: 153949814
Following gene: 153947956
Centisome position: 43.24
GC content: 42.37
Gene sequence:
>1638_bases ATGAACGCTCGATATAAATTACAGTGTAACGGATTAACATTTATTCTGGCCTGTGCACTGTTTTTTACCTTCTTCCAAAA TGCACTGTTTATTTATAAAGCCTGGTCGTTGATCCGATTCGACAATAGCGACAGCTATTTTTTTGCAGCAACCATTCCAG TCGTGATTTTCTGTGCACTGAATATTATTTTTAGCTTATTAACTCTCCCTCTGTTACGTAAGCCTATTATTATTTTATTC CTGTTGGGAAGTGCTGTGGCTAACTACTTTATGTTCAGCTATGGTGCTGTTATCGATGCCAATATGATGCAGAATGCCTT TGAAACTAACTCACAGGAAGCCACCGCCCTTTTCACTCCTCGTATGGCATTGTGGCTAATAACATTAGGTATTTTGCCTG CCATGATTGTCTGCTTTGTGCGAATTCGAGCGACTCGCCCTTGGTGGTATATGCTGGGGTTACGGGTAGCAAATATTTTA ATGTCAATGGTAATAATTTTTCTTATCGCAGTCTTGTTCTATAAAGATTATGCGTCGCTGATCCGCAATAATAAAAATAT CGTCAAAATGCTGACACCATCAAATTTTGTTAGCGGCAGTTTTCAATTTGCCAAACACAAGTATTTTATCAGTAACATGC CATTGGTAAAAATAGGTGAAGACGCCCATAAGGGCCCAGTGATTAATGCACAACAAAATAAAACGCTGGTGATTTTGGTG GTGGGTGAAACCGCCCGGTCAGAAAACTTTTCATTGGGCGGATATGCTCGGGAAACGAACCCTCGCCTGCAACAACAAGA TATCATTTATTTCAAACATGCCTCATCCTGTGGCACTGAAACGGCGGTCTCTGTCCCCTGTATGTTCTCTAATATGCCTC GCAAAAGTTATGACGCCTCCCTGGCGAGTCATCAGGAAGGGTTAATGGATATTATTGCGCGCGCTGGATTGAGTGTATTG TGGCGTGAAAATGATGGTGGCTGTAAAGGCGCTTGTGACCGTATTCCACACCAAGATGTGACACAATTGCAACTGAACGC AGATTGTCAGGATGGGGTGTGTTTAGATAATGCACTTTTATATAAACTGGATAACTATATTAATGGATTACAGAATGACG GTGTAATCGTCTTACACCAAATGGGCAGCCACGGGCCCGCATACTATCGCCGTACCAGCCCGGAGTTGACTAAATTCACC CCGACGTGTAATAGCAACCAGATTCAGGACTGCACCGCCCAAGAACTGGTCAATACATACGATAACTCTATTCTCTATAC TGATGCCATGCTGGATGACACCATTGCCTTGTTGAAACAGCACAGTGACCGATTTAATACGGCGTTGGTCTATCTTTCAG ACCATGGTGAATCACTCGGTGAAAACGGCCTCTATTTACATGGTACACCTTATGTATTTGCCCCAAGCCAGCAAACTCAT ATCCCTTTTCTGATGTGGTTATCACCAGAATATACAAAAAATTATGGTATTGACCGTCAATGCTTATCACATAGCGCACA ACAGGATGAAGTGTCTCAGGATAATCTCTTCCATACCCTATTAGGGATGGTAAACATTCAGACCAACGAATACTTATCAG GCATGGATTTACTGCAAAAATGCCGGAGTCTGCAATAG
Upstream 100 bases:
>100_bases TTGATGCAAGCGCAATCTCGCCCTGCTACCGCTAAGGTTATCTTAAGTTTCATTCGATATTCTTTAGGTAATGAATGAAC TGTAAGGTTAAATTTTCACA
Downstream 100 bases:
>100_bases CGATGGCTGTATCAACGAGAAGCCCATCGTGGCCTTGGACAGGATATTTTCCTCAATCAAAAAATTAATCAGATAAAACA GTCAATTAACAATATAAAAA
Product: cell division protein
Products: NA
Alternate protein names: Polymyxin resistance protein pmrC [H]
Number of amino acids: Translated: 545; Mature: 545
Protein sequence:
>545_residues MNARYKLQCNGLTFILACALFFTFFQNALFIYKAWSLIRFDNSDSYFFAATIPVVIFCALNIIFSLLTLPLLRKPIIILF LLGSAVANYFMFSYGAVIDANMMQNAFETNSQEATALFTPRMALWLITLGILPAMIVCFVRIRATRPWWYMLGLRVANIL MSMVIIFLIAVLFYKDYASLIRNNKNIVKMLTPSNFVSGSFQFAKHKYFISNMPLVKIGEDAHKGPVINAQQNKTLVILV VGETARSENFSLGGYARETNPRLQQQDIIYFKHASSCGTETAVSVPCMFSNMPRKSYDASLASHQEGLMDIIARAGLSVL WRENDGGCKGACDRIPHQDVTQLQLNADCQDGVCLDNALLYKLDNYINGLQNDGVIVLHQMGSHGPAYYRRTSPELTKFT PTCNSNQIQDCTAQELVNTYDNSILYTDAMLDDTIALLKQHSDRFNTALVYLSDHGESLGENGLYLHGTPYVFAPSQQTH IPFLMWLSPEYTKNYGIDRQCLSHSAQQDEVSQDNLFHTLLGMVNIQTNEYLSGMDLLQKCRSLQ
Sequences:
>Translated_545_residues MNARYKLQCNGLTFILACALFFTFFQNALFIYKAWSLIRFDNSDSYFFAATIPVVIFCALNIIFSLLTLPLLRKPIIILF LLGSAVANYFMFSYGAVIDANMMQNAFETNSQEATALFTPRMALWLITLGILPAMIVCFVRIRATRPWWYMLGLRVANIL MSMVIIFLIAVLFYKDYASLIRNNKNIVKMLTPSNFVSGSFQFAKHKYFISNMPLVKIGEDAHKGPVINAQQNKTLVILV VGETARSENFSLGGYARETNPRLQQQDIIYFKHASSCGTETAVSVPCMFSNMPRKSYDASLASHQEGLMDIIARAGLSVL WRENDGGCKGACDRIPHQDVTQLQLNADCQDGVCLDNALLYKLDNYINGLQNDGVIVLHQMGSHGPAYYRRTSPELTKFT PTCNSNQIQDCTAQELVNTYDNSILYTDAMLDDTIALLKQHSDRFNTALVYLSDHGESLGENGLYLHGTPYVFAPSQQTH IPFLMWLSPEYTKNYGIDRQCLSHSAQQDEVSQDNLFHTLLGMVNIQTNEYLSGMDLLQKCRSLQ >Mature_545_residues MNARYKLQCNGLTFILACALFFTFFQNALFIYKAWSLIRFDNSDSYFFAATIPVVIFCALNIIFSLLTLPLLRKPIIILF LLGSAVANYFMFSYGAVIDANMMQNAFETNSQEATALFTPRMALWLITLGILPAMIVCFVRIRATRPWWYMLGLRVANIL MSMVIIFLIAVLFYKDYASLIRNNKNIVKMLTPSNFVSGSFQFAKHKYFISNMPLVKIGEDAHKGPVINAQQNKTLVILV VGETARSENFSLGGYARETNPRLQQQDIIYFKHASSCGTETAVSVPCMFSNMPRKSYDASLASHQEGLMDIIARAGLSVL WRENDGGCKGACDRIPHQDVTQLQLNADCQDGVCLDNALLYKLDNYINGLQNDGVIVLHQMGSHGPAYYRRTSPELTKFT PTCNSNQIQDCTAQELVNTYDNSILYTDAMLDDTIALLKQHSDRFNTALVYLSDHGESLGENGLYLHGTPYVFAPSQQTH IPFLMWLSPEYTKNYGIDRQCLSHSAQQDEVSQDNLFHTLLGMVNIQTNEYLSGMDLLQKCRSLQ
Specific function: Catalyzes the addition of a phosphoethanolamine moiety to the lipid A. The phosphoethanolamine modification is required for resistance to polymyxin [H]
COG id: COG2194
COG function: function code R; Predicted membrane-associated, metal-dependent hydrolase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphoethanolamine transferase family. EptA subfamily [H]
Homologues:
Organism=Escherichia coli, GI87082372, Length=531, Percent_Identity=51.0357815442561, Blast_Score=564, Evalue=1e-162, Organism=Escherichia coli, GI87082286, Length=443, Percent_Identity=25.2821670428894, Blast_Score=125, Evalue=7e-30, Organism=Escherichia coli, GI1790392, Length=518, Percent_Identity=24.1312741312741, Blast_Score=87, Evalue=2e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017849 - InterPro: IPR017850 - InterPro: IPR012549 - InterPro: IPR000917 [H]
Pfam domain/function: PF08019 DUF1705; PF00884 Sulfatase [H]
EC number: NA
Molecular weight: Translated: 61443; Mature: 61443
Theoretical pI: Translated: 6.95; Mature: 6.95
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNARYKLQCNGLTFILACALFFTFFQNALFIYKAWSLIRFDNSDSYFFAATIPVVIFCAL CCCEEEEEECCHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCCCCEEEEHHHHHHHHHHH NIIFSLLTLPLLRKPIIILFLLGSAVANYFMFSYGAVIDANMMQNAFETNSQEATALFTP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHEEHHHHHHHHHCCCCCCEEEECH RMALWLITLGILPAMIVCFVRIRATRPWWYMLGLRVANILMSMVIIFLIAVLFYKDYASL HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IRNNKNIVKMLTPSNFVSGSFQFAKHKYFISNMPLVKIGEDAHKGPVINAQQNKTLVILV HHCCCCEEEEECCCCCCCCCHHHHHHEEEECCCCEEEECCCCCCCCEEECCCCCEEEEEE VGETARSENFSLGGYARETNPRLQQQDIIYFKHASSCGTETAVSVPCMFSNMPRKSYDAS ECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEECCHHHCCCCCCHHHHH LASHQEGLMDIIARAGLSVLWRENDGGCKGACDRIPHQDVTQLQLNADCQDGVCLDNALL HHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHCCCCCCCCEEEECCCCCCCEEHHHHHH YKLDNYINGLQNDGVIVLHQMGSHGPAYYRRTSPELTKFTPTCNSNQIQDCTAQELVNTY HHHHHHHCCCCCCCEEEEEECCCCCCCCEECCCCCCEEECCCCCCCCCCHHHHHHHHHHH DNSILYTDAMLDDTIALLKQHSDRFNTALVYLSDHGESLGENGLYLHGTPYVFAPSQQTH CCCEEEEHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCEEEECCCEEECCCCCCC IPFLMWLSPEYTKNYGIDRQCLSHSAQQDEVSQDNLFHTLLGMVNIQTNEYLSGMDLLQK CCEEEEECCCHHHCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHH CRSLQ HHCCC >Mature Secondary Structure MNARYKLQCNGLTFILACALFFTFFQNALFIYKAWSLIRFDNSDSYFFAATIPVVIFCAL CCCEEEEEECCHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCCCCEEEEHHHHHHHHHHH NIIFSLLTLPLLRKPIIILFLLGSAVANYFMFSYGAVIDANMMQNAFETNSQEATALFTP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHEEHHHHHHHHHCCCCCCEEEECH RMALWLITLGILPAMIVCFVRIRATRPWWYMLGLRVANILMSMVIIFLIAVLFYKDYASL HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IRNNKNIVKMLTPSNFVSGSFQFAKHKYFISNMPLVKIGEDAHKGPVINAQQNKTLVILV HHCCCCEEEEECCCCCCCCCHHHHHHEEEECCCCEEEECCCCCCCCEEECCCCCEEEEEE VGETARSENFSLGGYARETNPRLQQQDIIYFKHASSCGTETAVSVPCMFSNMPRKSYDAS ECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEECCHHHCCCCCCHHHHH LASHQEGLMDIIARAGLSVLWRENDGGCKGACDRIPHQDVTQLQLNADCQDGVCLDNALL HHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHCCCCCCCCEEEECCCCCCCEEHHHHHH YKLDNYINGLQNDGVIVLHQMGSHGPAYYRRTSPELTKFTPTCNSNQIQDCTAQELVNTY HHHHHHHCCCCCCCEEEEEECCCCCCCCEECCCCCCEEECCCCCCCCCCHHHHHHHHHHH DNSILYTDAMLDDTIALLKQHSDRFNTALVYLSDHGESLGENGLYLHGTPYVFAPSQQTH CCCEEEEHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCEEEECCCEEECCCCCCC IPFLMWLSPEYTKNYGIDRQCLSHSAQQDEVSQDNLFHTLLGMVNIQTNEYLSGMDLLQK CCEEEEECCCHHHCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHH CRSLQ HHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8391535; 11677609 [H]