| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is 153947756
Identifier: 153947756
GI number: 153947756
Start: 2544101
End: 2544319
Strand: Direct
Name: 153947756
Synonym: YpsIP31758_2233
Alternate gene names: NA
Gene position: 2544101-2544319 (Clockwise)
Preceding gene: 153948024
Following gene: 153946926
Centisome position: 53.86
GC content: 42.47
Gene sequence:
>219_bases ATGTCTAATACTGCTCGCATGCCAAAATTTAAGATCGGCGATATTGTTTATCTGGTTACCGGCGGCCCAAGCATGTCGAT ATCAGAAGCATTGAACGAACACAAAAATGGCTCAAGGGATTTCCATGGGAACTACAAATGCCAATGGTTTGCAGGTAAAA AACTAGACCAAGGTTTATTCCCAGAAGAATCTCTGACCCCAACAAACCCAAAGCCTTAA
Upstream 100 bases:
>100_bases AAAAACGCTTACGTGACATTCAAATCGATAAGGCACTCGCAATAGGACATATCTTGTTTGTCGGTGAATAACATATTTTC TCATTTATAAAGGAAGTTTT
Downstream 100 bases:
>100_bases ACCCAAACGCTCCTGAGGTATCTGTTACTGATATTTCTTCCTGGATGATGGCTATTCTTAAAAAAGATGGCTGCCTATAT CAGCAAAATGTAGTCGATTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 72; Mature: 71
Protein sequence:
>72_residues MSNTARMPKFKIGDIVYLVTGGPSMSISEALNEHKNGSRDFHGNYKCQWFAGKKLDQGLFPEESLTPTNPKP
Sequences:
>Translated_72_residues MSNTARMPKFKIGDIVYLVTGGPSMSISEALNEHKNGSRDFHGNYKCQWFAGKKLDQGLFPEESLTPTNPKP >Mature_71_residues SNTARMPKFKIGDIVYLVTGGPSMSISEALNEHKNGSRDFHGNYKCQWFAGKKLDQGLFPEESLTPTNPKP
Specific function: Unknown
COG id: COG5475
COG function: function code S; Uncharacterized small protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8014; Mature: 7883
Theoretical pI: Translated: 9.18; Mature: 9.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNTARMPKFKIGDIVYLVTGGPSMSISEALNEHKNGSRDFHGNYKCQWFAGKKLDQGLF CCCCCCCCEEECCCEEEEEECCCCCCHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCC PEESLTPTNPKP CCCCCCCCCCCC >Mature Secondary Structure SNTARMPKFKIGDIVYLVTGGPSMSISEALNEHKNGSRDFHGNYKCQWFAGKKLDQGLF CCCCCCCEEECCCEEEEEECCCCCCHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCC PEESLTPTNPKP CCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA