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The map label for this gene is 153947727

Identifier: 153947727

GI number: 153947727

Start: 1606163

End: 1606702

Strand: Direct

Name: 153947727

Synonym: YpsIP31758_1370

Alternate gene names: NA

Gene position: 1606163-1606702 (Clockwise)

Preceding gene: 153947260

Following gene: 153949757

Centisome position: 34.01

GC content: 43.89

Gene sequence:

>540_bases
ATGAATAAAAGTATCCGAGGGGTTTACCGGGCGACACAGTACTTATTTTTGGTACTGGTAACGTTATTGACGATAGCCTG
TAGTTCAAAAGTGCAACCTGAAAAGGCTGAAAAACTTACCGTCGAAATCGCGACAGCAGCGGATATTAATCCGAATGATA
AAGGGGTGGCGAACCCGCTAAGGATTGCGCTTTATACACTCAAGAGCACCGATGAATTTCAGTCGAGTGATTTCTTCACT
ATCACTGAAGAAAATACGCCATCGCTAAAAGAACAAATGGATAACGTGTTTGACCGGATTATGTTGCCAAGCGAGACCAA
AAAAATAGAGCTGACACTTGATGCTGGCGTTACTGCTATCGGCATCGTGGCTGCTTATCGTGAAATTGAACAGGCGGAGT
GGAAAGCGGTTATTTATCCGTTGCCCAAAAAGCGCGTGGACCCTTGGTATAAAAAAATGTGGCCAGGGCAAGACCAACAA
GATCCGATCATGAAGGTACGCGTTGAGCGTCTGTCAATATCAATTAAAGAAATGGATTAA

Upstream 100 bases:

>100_bases
GCCCCGTCATGATGCCGTTAATCTGTAGCTGAAAATATTATTGTGGATAAGGCTTAACGTTTTTTTAATTAGGCTAAGTA
TGATTTTAATTAGGCTAAGT

Downstream 100 bases:

>100_bases
GCCGTGAGAACTAACAAAGTCGTTTGGAGTGAGGGGCTTTTTCTTCGCCCACAACTTTTTCAACAGCAAGAGCGCTATCT
TGAATATTACGCCCATAAGC

Product: lipoprotein

Products: NA

Alternate protein names: Type VI Secretion Lipoprotein; Replication/Virulence Associated Protein; Type VI Secretion Lipoprotein/VasD; Outer Membrane Lipoprotein; T6ss N; SciN Protein

Number of amino acids: Translated: 179; Mature: 179

Protein sequence:

>179_residues
MNKSIRGVYRATQYLFLVLVTLLTIACSSKVQPEKAEKLTVEIATAADINPNDKGVANPLRIALYTLKSTDEFQSSDFFT
ITEENTPSLKEQMDNVFDRIMLPSETKKIELTLDAGVTAIGIVAAYREIEQAEWKAVIYPLPKKRVDPWYKKMWPGQDQQ
DPIMKVRVERLSISIKEMD

Sequences:

>Translated_179_residues
MNKSIRGVYRATQYLFLVLVTLLTIACSSKVQPEKAEKLTVEIATAADINPNDKGVANPLRIALYTLKSTDEFQSSDFFT
ITEENTPSLKEQMDNVFDRIMLPSETKKIELTLDAGVTAIGIVAAYREIEQAEWKAVIYPLPKKRVDPWYKKMWPGQDQQ
DPIMKVRVERLSISIKEMD
>Mature_179_residues
MNKSIRGVYRATQYLFLVLVTLLTIACSSKVQPEKAEKLTVEIATAADINPNDKGVANPLRIALYTLKSTDEFQSSDFFT
ITEENTPSLKEQMDNVFDRIMLPSETKKIELTLDAGVTAIGIVAAYREIEQAEWKAVIYPLPKKRVDPWYKKMWPGQDQQ
DPIMKVRVERLSISIKEMD

Specific function: Unknown

COG id: COG3521

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20386; Mature: 20386

Theoretical pI: Translated: 5.41; Mature: 5.41

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKSIRGVYRATQYLFLVLVTLLTIACSSKVQPEKAEKLTVEIATAADINPNDKGVANPL
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCE
RIALYTLKSTDEFQSSDFFTITEENTPSLKEQMDNVFDRIMLPSETKKIELTLDAGVTAI
EEEEEEECCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHH
GIVAAYREIEQAEWKAVIYPLPKKRVDPWYKKMWPGQDQQDPIMKVRVERLSISIKEMD
HHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHEEEEEECC
>Mature Secondary Structure
MNKSIRGVYRATQYLFLVLVTLLTIACSSKVQPEKAEKLTVEIATAADINPNDKGVANPL
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCE
RIALYTLKSTDEFQSSDFFTITEENTPSLKEQMDNVFDRIMLPSETKKIELTLDAGVTAI
EEEEEEECCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHH
GIVAAYREIEQAEWKAVIYPLPKKRVDPWYKKMWPGQDQQDPIMKVRVERLSISIKEMD
HHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA