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The map label for this gene is fliR2 [H]

Identifier: 153947704

GI number: 153947704

Start: 736275

End: 737048

Strand: Reverse

Name: fliR2 [H]

Synonym: YpsIP31758_0624

Alternate gene names: 153947704

Gene position: 737048-736275 (Counterclockwise)

Preceding gene: 153949888

Following gene: 153947127

Centisome position: 15.6

GC content: 47.29

Gene sequence:

>774_bases
ATGGGAATCGATATTCATGCCATGACGGCTCCGCTCTTCGCACTCTGGCTACCTTTTGTCAGAATTTTGTCGTTTTTGCA
TTTTTGTCCGGTTATTCGGCATAAGGCCTTTACCCGCAAAGCCAAGATTGGCACCGCGCTGTTACTGGCTATCTTGATAA
CCCCAATGATCAGCCAACCGGTGGTATCCAGGGAATTGCTCTCGATTGAAAGCCTCTTATTGGCCGGTGAACAAATCCTG
TGGGGCTGGTTATTTGGCTCCATGTTGCATTTGGTGTTGGCCGCATTAGAGGCCGCGGGTCAGATTCTATCGATGAATAT
GGGCCTGGGTATGGCAATGATGAATGACCCCACCAGCGGAGCATCGACGGCGGTTATCTCACAAATAATCTTTACTTTCA
GTGTGTTGATTTTTTTTACCCTTGATGGCCACTTACTGTTTGTCACCATTGTGTTGAAAAGTTTCAGTAGCTGGCCTATC
GGCGAAGCCATCAATGATTTTTCGCTACGCTCATTGGCATTAAGTCTTGGATGGATTATCTCATCGGCTACCCTGCTGGC
ACTGCCTACCACCTTTATCATGCTGATCGTGCAAGGGTCTTTCGGTTTACTGAACCGTATCTCACCCACGTTAAACCTGT
TTTCACTGGGTTTCCCTATCGGCATGTTGTTTGGTCTGCTGTGTCTGCTGCTGTTAGCGATCAATATCCCTGATCATTAT
CTTCATCTGACCAATGAGATCCTGACACAGTTTGAACGGATGAAGGTGCACTGA

Upstream 100 bases:

>100_bases
GTTGGTTCTCATTTTTGCGGGTAAATGGATGATGACCAAACTGAGTGATTTTACCGTCAGTATTTTCCAGCAAGCCGCAC
AGTTGGTTGGGTAAATGCCG

Downstream 100 bases:

>100_bases
TGTCGAACAGCAGTGGTGAGAAGAGTGAAAAACCCACAACGGGGAAGCTGTCGAAAGCCAGAAAAAAAGGCGATATCCCC
CGCTCTAAAGATGTCACCAT

Product: flagellar biosynthetic protein FliR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 257; Mature: 256

Protein sequence:

>257_residues
MGIDIHAMTAPLFALWLPFVRILSFLHFCPVIRHKAFTRKAKIGTALLLAILITPMISQPVVSRELLSIESLLLAGEQIL
WGWLFGSMLHLVLAALEAAGQILSMNMGLGMAMMNDPTSGASTAVISQIIFTFSVLIFFTLDGHLLFVTIVLKSFSSWPI
GEAINDFSLRSLALSLGWIISSATLLALPTTFIMLIVQGSFGLLNRISPTLNLFSLGFPIGMLFGLLCLLLLAINIPDHY
LHLTNEILTQFERMKVH

Sequences:

>Translated_257_residues
MGIDIHAMTAPLFALWLPFVRILSFLHFCPVIRHKAFTRKAKIGTALLLAILITPMISQPVVSRELLSIESLLLAGEQIL
WGWLFGSMLHLVLAALEAAGQILSMNMGLGMAMMNDPTSGASTAVISQIIFTFSVLIFFTLDGHLLFVTIVLKSFSSWPI
GEAINDFSLRSLALSLGWIISSATLLALPTTFIMLIVQGSFGLLNRISPTLNLFSLGFPIGMLFGLLCLLLLAINIPDHY
LHLTNEILTQFERMKVH
>Mature_256_residues
GIDIHAMTAPLFALWLPFVRILSFLHFCPVIRHKAFTRKAKIGTALLLAILITPMISQPVVSRELLSIESLLLAGEQILW
GWLFGSMLHLVLAALEAAGQILSMNMGLGMAMMNDPTSGASTAVISQIIFTFSVLIFFTLDGHLLFVTIVLKSFSSWPIG
EAINDFSLRSLALSLGWIISSATLLALPTTFIMLIVQGSFGLLNRISPTLNLFSLGFPIGMLFGLLCLLLLAINIPDHYL
HLTNEILTQFERMKVH

Specific function: Role in flagellar biosynthesis [H]

COG id: COG1684

COG function: function code NU; Flagellar biosynthesis pathway, component FliR

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential). Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliR/mopE/spaR family [H]

Homologues:

Organism=Escherichia coli, GI1788261, Length=231, Percent_Identity=30.7359307359307, Blast_Score=92, Evalue=4e-20,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006303
- InterPro:   IPR002010 [H]

Pfam domain/function: PF01311 Bac_export_1 [H]

EC number: NA

Molecular weight: Translated: 28264; Mature: 28132

Theoretical pI: Translated: 7.75; Mature: 7.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGIDIHAMTAPLFALWLPFVRILSFLHFCPVIRHKAFTRKAKIGTALLLAILITPMISQP
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
VVSRELLSIESLLLAGEQILWGWLFGSMLHLVLAALEAAGQILSMNMGLGMAMMNDPTSG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCC
ASTAVISQIIFTFSVLIFFTLDGHLLFVTIVLKSFSSWPIGEAINDFSLRSLALSLGWII
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
SSATLLALPTTFIMLIVQGSFGLLNRISPTLNLFSLGFPIGMLFGLLCLLLLAINIPDHY
HHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
LHLTNEILTQFERMKVH
HHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
GIDIHAMTAPLFALWLPFVRILSFLHFCPVIRHKAFTRKAKIGTALLLAILITPMISQP
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
VVSRELLSIESLLLAGEQILWGWLFGSMLHLVLAALEAAGQILSMNMGLGMAMMNDPTSG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCC
ASTAVISQIIFTFSVLIFFTLDGHLLFVTIVLKSFSSWPIGEAINDFSLRSLALSLGWII
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
SSATLLALPTTFIMLIVQGSFGLLNRISPTLNLFSLGFPIGMLFGLLCLLLLAINIPDHY
HHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
LHLTNEILTQFERMKVH
HHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8412685; 7934865 [H]