| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is 153947631
Identifier: 153947631
GI number: 153947631
Start: 767142
End: 767612
Strand: Direct
Name: 153947631
Synonym: YpsIP31758_0659
Alternate gene names: NA
Gene position: 767142-767612 (Clockwise)
Preceding gene: 153950073
Following gene: 153947529
Centisome position: 16.24
GC content: 39.92
Gene sequence:
>471_bases ATGAAGACCAAGAAAAAAGCATTTTCGATGAAAATGCGGGTATTCCTATTGCTAATTTCCGGGGTAATCGCTGTTTTTTT ATTTTCCCGCGAGACGATTTTAAAAAAAATGGGGTATCAACCTGCCACGGTGAGCCAATCTTTTGTTCGTGGTAATAAAG CGGTTCAGTTTGTTGAAATTAAGAACATGGTGATTACGCTGAAAGACAATAACGCCGAGCGCTATTTGCAACTGGAATTA GGCATGGCAACCGGTGATGACAAAGACATTAAAAATGTCATTGCGATGGTGCCGGTTATTCAAGCCACGACAGTGAATTT ACTTTCCAATATGGATTATCAAGCGGTGCGCCATACCTCTATTTTAGATTTACGCCGCCAGCTAATGAATGAATATAAGC AAGATTTCGCAGAATTAAATGTGCCGATGCCATTTGATGATGTGGTTATCAGCAGAATGGTCTTTCAATAA
Upstream 100 bases:
>100_bases ATTCTGGCTGCACAACATTTTGAGAGTCAGGCAGAAAAAAATGCCGATGATGGGACGCTCCTAATAACGATATAAAGATA TCTACTACAAAGGATTATTG
Downstream 100 bases:
>100_bases TCATAATGGAAAAAAGAGAATTTGAAGCGTGCTTAACGCTCACTGCCGCAGAGGAAGGGAAATATCTGAACGCGTATTTA CCGCTGGTAAAACGTATTGT
Product: flagellar protein
Products: NA
Alternate protein names: Flagellar Biogenesis Protein Associated With Basal Body
Number of amino acids: Translated: 156; Mature: 156
Protein sequence:
>156_residues MKTKKKAFSMKMRVFLLLISGVIAVFLFSRETILKKMGYQPATVSQSFVRGNKAVQFVEIKNMVITLKDNNAERYLQLEL GMATGDDKDIKNVIAMVPVIQATTVNLLSNMDYQAVRHTSILDLRRQLMNEYKQDFAELNVPMPFDDVVISRMVFQ
Sequences:
>Translated_156_residues MKTKKKAFSMKMRVFLLLISGVIAVFLFSRETILKKMGYQPATVSQSFVRGNKAVQFVEIKNMVITLKDNNAERYLQLEL GMATGDDKDIKNVIAMVPVIQATTVNLLSNMDYQAVRHTSILDLRRQLMNEYKQDFAELNVPMPFDDVVISRMVFQ >Mature_156_residues MKTKKKAFSMKMRVFLLLISGVIAVFLFSRETILKKMGYQPATVSQSFVRGNKAVQFVEIKNMVITLKDNNAERYLQLEL GMATGDDKDIKNVIAMVPVIQATTVNLLSNMDYQAVRHTSILDLRRQLMNEYKQDFAELNVPMPFDDVVISRMVFQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17886; Mature: 17886
Theoretical pI: Translated: 10.22; Mature: 10.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 7.1 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 7.1 %Met (Mature Protein) 7.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTKKKAFSMKMRVFLLLISGVIAVFLFSRETILKKMGYQPATVSQSFVRGNKAVQFVEI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCEEEEEE KNMVITLKDNNAERYLQLELGMATGDDKDIKNVIAMVPVIQATTVNLLSNMDYQAVRHTS CCEEEEEECCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH ILDLRRQLMNEYKQDFAELNVPMPFDDVVISRMVFQ HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCC >Mature Secondary Structure MKTKKKAFSMKMRVFLLLISGVIAVFLFSRETILKKMGYQPATVSQSFVRGNKAVQFVEI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCEEEEEE KNMVITLKDNNAERYLQLELGMATGDDKDIKNVIAMVPVIQATTVNLLSNMDYQAVRHTS CCEEEEEECCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH ILDLRRQLMNEYKQDFAELNVPMPFDDVVISRMVFQ HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA