| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is 153947470
Identifier: 153947470
GI number: 153947470
Start: 2397522
End: 2398595
Strand: Direct
Name: 153947470
Synonym: YpsIP31758_2089
Alternate gene names: NA
Gene position: 2397522-2398595 (Clockwise)
Preceding gene: 153950181
Following gene: 153947254
Centisome position: 50.76
GC content: 48.7
Gene sequence:
>1074_bases TTGAAAGCCTTACTGAAAACATTCACCACTTGTATGTTGGTTGGTGGATTAATCTCCCAATCTACATTTGCTGAACCAAC AAAACCCTTGGTTATCCAGTCTCAAGGAAGTTTTGCCGCCGGTGGGGCCGTCATTACGACACCAGGGCAGTTTGATCCGA AAAAACCATTGGACCCAACAGGTCAAACATATCATGGTGATCACGCCTCTGTGTTTTACCAGATCCCTGAGAACCCACAC AAATATCCCATTGTGATGTTGCACGGTGCCGGGCAGTCTTCCCGGACATGGGAAAGCACACCGGATGGCCGCGAGGGTTT TCAGAACATCTTCCTGCGCCGTGGCTTTTCGACCTATCTGGTCGATCAACCGCGTCGGGGTAATGCCGGGCGCAGTATGG TGGAAGGAACTGTCAAACCACTTGCTGATGAGCAATTATGGTTTAACCAGTTCCGTCTGGGTATATGGCCCGATTTCTTT GATGGCGTACAGTTCTCCCATGATAAAGAGACATTAAATCAGTACTACCGTCAGATGACCCCTAACACCGGGCCCTTTGA TATCGATGTAATTTCAGATGCCATGTCAGCCGTAGTGGATAAATCTGGCCCGGCTATTTTGTTTACACACTCTCAGGGTG GCGGCCCAGGCTGGTTTACCGCGATGAAGAACGCCAATGTAAAAGGGATAGTCGCGTTTGAACCTGGCAGCAGCTTTGTC TTTCCGGAAGGCGACGTCCCTCCCCCAACAAAGAATGCTTTTGATACCGTAAAAGGGGAATCGGTGCCTCTGGAGAAGTT TATGGCACTGACTAAAATCCCTGTCCTGATTATCTACGGCGACAATATCCCTGACAAACCAACGGCCTTGCCTGCACAGG ATAGTTGGCGTGCCCGGTTGGCTGTTGCGCGTCAATGGCGGGATGTGGTGAATAAACATGGCGGAGACGTGACAGTAATC CATTTGCCGGAAATTGGTATAAAAGGCAATACTCACTTCCCTTTCTCTGATCTGAATAACGTTGAAATCGCCGATCAGGT ATCAAAATTCCTGAAAGATAAAAATCTTCAGTAA
Upstream 100 bases:
>100_bases TTCATGAGTTCTGCCTGTTAACGCATTCATTTTAGCAGCATGGTCATTCGTGAAAATCTCGCTATGATTCAGTTGTCCGC TATCACATAAGGAAAAGACC
Downstream 100 bases:
>100_bases TAAAAAATTAGTGGGGTCGTTGACGGCTCCACTACTGCTTATATACTCGTCATACTTTAAGCTGCATCTGTGTTGGCTAC GCTCAACAACCCCAGGTACT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 357; Mature: 357
Protein sequence:
>357_residues MKALLKTFTTCMLVGGLISQSTFAEPTKPLVIQSQGSFAAGGAVITTPGQFDPKKPLDPTGQTYHGDHASVFYQIPENPH KYPIVMLHGAGQSSRTWESTPDGREGFQNIFLRRGFSTYLVDQPRRGNAGRSMVEGTVKPLADEQLWFNQFRLGIWPDFF DGVQFSHDKETLNQYYRQMTPNTGPFDIDVISDAMSAVVDKSGPAILFTHSQGGGPGWFTAMKNANVKGIVAFEPGSSFV FPEGDVPPPTKNAFDTVKGESVPLEKFMALTKIPVLIIYGDNIPDKPTALPAQDSWRARLAVARQWRDVVNKHGGDVTVI HLPEIGIKGNTHFPFSDLNNVEIADQVSKFLKDKNLQ
Sequences:
>Translated_357_residues MKALLKTFTTCMLVGGLISQSTFAEPTKPLVIQSQGSFAAGGAVITTPGQFDPKKPLDPTGQTYHGDHASVFYQIPENPH KYPIVMLHGAGQSSRTWESTPDGREGFQNIFLRRGFSTYLVDQPRRGNAGRSMVEGTVKPLADEQLWFNQFRLGIWPDFF DGVQFSHDKETLNQYYRQMTPNTGPFDIDVISDAMSAVVDKSGPAILFTHSQGGGPGWFTAMKNANVKGIVAFEPGSSFV FPEGDVPPPTKNAFDTVKGESVPLEKFMALTKIPVLIIYGDNIPDKPTALPAQDSWRARLAVARQWRDVVNKHGGDVTVI HLPEIGIKGNTHFPFSDLNNVEIADQVSKFLKDKNLQ >Mature_357_residues MKALLKTFTTCMLVGGLISQSTFAEPTKPLVIQSQGSFAAGGAVITTPGQFDPKKPLDPTGQTYHGDHASVFYQIPENPH KYPIVMLHGAGQSSRTWESTPDGREGFQNIFLRRGFSTYLVDQPRRGNAGRSMVEGTVKPLADEQLWFNQFRLGIWPDFF DGVQFSHDKETLNQYYRQMTPNTGPFDIDVISDAMSAVVDKSGPAILFTHSQGGGPGWFTAMKNANVKGIVAFEPGSSFV FPEGDVPPPTKNAFDTVKGESVPLEKFMALTKIPVLIIYGDNIPDKPTALPAQDSWRARLAVARQWRDVVNKHGGDVTVI HLPEIGIKGNTHFPFSDLNNVEIADQVSKFLKDKNLQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39310; Mature: 39310
Theoretical pI: Translated: 7.03; Mature: 7.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKALLKTFTTCMLVGGLISQSTFAEPTKPLVIQSQGSFAAGGAVITTPGQFDPKKPLDPT CHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCEEECCEEEECCCCCCCCCCCCCC GQTYHGDHASVFYQIPENPHKYPIVMLHGAGQSSRTWESTPDGREGFQNIFLRRGFSTYL CCCCCCCCEEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEE VDQPRRGNAGRSMVEGTVKPLADEQLWFNQFRLGIWPDFFDGVQFSHDKETLNQYYRQMT ECCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHCCCCCCCCHHHHHHHHHHHC PNTGPFDIDVISDAMSAVVDKSGPAILFTHSQGGGPGWFTAMKNANVKGIVAFEPGSSFV CCCCCEEHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHEECCCCCEEEEEECCCCCEE FPEGDVPPPTKNAFDTVKGESVPLEKFMALTKIPVLIIYGDNIPDKPTALPAQDSWRARL CCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCHHHHH AVARQWRDVVNKHGGDVTVIHLPEIGIKGNTHFPFSDLNNVEIADQVSKFLKDKNLQ HHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCC >Mature Secondary Structure MKALLKTFTTCMLVGGLISQSTFAEPTKPLVIQSQGSFAAGGAVITTPGQFDPKKPLDPT CHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCEEECCEEEECCCCCCCCCCCCCC GQTYHGDHASVFYQIPENPHKYPIVMLHGAGQSSRTWESTPDGREGFQNIFLRRGFSTYL CCCCCCCCEEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEE VDQPRRGNAGRSMVEGTVKPLADEQLWFNQFRLGIWPDFFDGVQFSHDKETLNQYYRQMT ECCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHCCCCCCCCHHHHHHHHHHHC PNTGPFDIDVISDAMSAVVDKSGPAILFTHSQGGGPGWFTAMKNANVKGIVAFEPGSSFV CCCCCEEHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHEECCCCCEEEEEECCCCCEE FPEGDVPPPTKNAFDTVKGESVPLEKFMALTKIPVLIIYGDNIPDKPTALPAQDSWRARL CCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCHHHHH AVARQWRDVVNKHGGDVTVIHLPEIGIKGNTHFPFSDLNNVEIADQVSKFLKDKNLQ HHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA