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The map label for this gene is phnA [H]

Identifier: 153947442

GI number: 153947442

Start: 1619364

End: 1619705

Strand: Reverse

Name: phnA [H]

Synonym: YpsIP31758_1380

Alternate gene names: 153947442

Gene position: 1619705-1619364 (Counterclockwise)

Preceding gene: 153949792

Following gene: 153947692

Centisome position: 34.29

GC content: 45.91

Gene sequence:

>342_bases
GTGCAGACATTACCAAACTGTCCAAAATGCAGTTCTGAATTTACATGGCAGGAAGGGGAGCAACTGAATTGCCCGGAGTG
TGGTCATGAGTGGTCAGAAAGCAGCCATTCAACCGAGGCCGACGAGGGCCTTGTGGTCTATGACGCCAATGGTAATCTGC
TGGCTGATGGTGATGCAGTGACGGTGGTGAAGGATCTGAAAGTAAAAGGCAGCTCTTCAACCCTGAAAATCGGCACCAAA
GTAAAAGGTATCCGTTTGGTTGAAGGTGATCACAATATCGATTGTAAAATCGATGGATTTGGCCAAATGAAGCTCAAGTC
TGAATTTGTTAAGAAAAGCTAA

Upstream 100 bases:

>100_bases
CTTTAATTAAATAAAAAGTGTAAAATGTATACACATCAATACAGTAACCTGTAATTAACTACATTTTAATATTTATATCG
TTTTATTTTAAGGAGTTACC

Downstream 100 bases:

>100_bases
TGCATTAATGGGTTCTTTGCCACCCAAGCAGAGAGCCCTTCTATTATCTTGGAAGATCTTATTATCCTGGAATATCAGCG
CGCTCCGGACATAACATCGA

Product: alkylphosphonate utilization operon protein PhnA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 113; Mature: 113

Protein sequence:

>113_residues
MQTLPNCPKCSSEFTWQEGEQLNCPECGHEWSESSHSTEADEGLVVYDANGNLLADGDAVTVVKDLKVKGSSSTLKIGTK
VKGIRLVEGDHNIDCKIDGFGQMKLKSEFVKKS

Sequences:

>Translated_113_residues
MQTLPNCPKCSSEFTWQEGEQLNCPECGHEWSESSHSTEADEGLVVYDANGNLLADGDAVTVVKDLKVKGSSSTLKIGTK
VKGIRLVEGDHNIDCKIDGFGQMKLKSEFVKKS
>Mature_113_residues
MQTLPNCPKCSSEFTWQEGEQLNCPECGHEWSESSHSTEADEGLVVYDANGNLLADGDAVTVVKDLKVKGSSSTLKIGTK
VKGIRLVEGDHNIDCKIDGFGQMKLKSEFVKKS

Specific function: Unknown

COG id: COG2824

COG function: function code P; Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790547, Length=112, Percent_Identity=70.5357142857143, Blast_Score=168, Evalue=1e-43,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004624
- InterPro:   IPR013988
- InterPro:   IPR013987 [H]

Pfam domain/function: PF03831 PhnA; PF08274 PhnA_Zn_Ribbon [H]

EC number: NA

Molecular weight: Translated: 12305; Mature: 12305

Theoretical pI: Translated: 4.92; Mature: 4.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
4.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTLPNCPKCSSEFTWQEGEQLNCPECGHEWSESSHSTEADEGLVVYDANGNLLADGDAV
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEECCCEE
TVVKDLKVKGSSSTLKIGTKVKGIRLVEGDHNIDCKIDGFGQMKLKSEFVKKS
EEEEEEEECCCCCEEEECCEECEEEEEECCCCEEEEECCCCCEEEHHHHHCCC
>Mature Secondary Structure
MQTLPNCPKCSSEFTWQEGEQLNCPECGHEWSESSHSTEADEGLVVYDANGNLLADGDAV
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEECCCEE
TVVKDLKVKGSSSTLKIGTKVKGIRLVEGDHNIDCKIDGFGQMKLKSEFVKKS
EEEEEEEECCCCCEEEECCEECEEEEEECCCCEEEEECCCCCEEEHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]